##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2933323.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 484870 Sequences flagged as poor quality 0 Sequence length 51 %GC 38 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 28.751479778084846 31.0 28.0 31.0 16.0 33.0 2 29.208777610493534 31.0 30.0 33.0 16.0 34.0 3 29.389135232124076 31.0 30.0 33.0 16.0 34.0 4 32.25012683812156 35.0 32.0 37.0 19.0 37.0 5 33.62968218285314 35.0 33.0 37.0 28.0 37.0 6 32.94697754037165 35.0 33.0 37.0 25.0 37.0 7 31.899245158496093 35.0 30.0 35.0 25.0 37.0 8 33.11716130096727 35.0 33.0 35.0 28.0 37.0 9 32.803596840390206 35.0 31.0 37.0 25.0 39.0 10 31.127819827995133 35.0 27.0 39.0 15.0 39.0 11 32.03993235300184 35.0 27.0 39.0 15.0 39.0 12 32.93080619547508 35.0 31.0 39.0 22.0 39.0 13 33.22407861901128 35.0 31.0 39.0 23.0 39.0 14 33.36995689566275 36.0 31.0 40.0 18.0 41.0 15 33.99299193598284 37.0 32.0 40.0 24.0 41.0 16 34.12821787283189 37.0 32.0 40.0 25.0 41.0 17 32.067482005486006 35.0 27.0 39.0 18.0 41.0 18 32.83855878895374 36.0 30.0 39.0 21.0 39.0 19 32.652789407470046 36.0 30.0 37.0 19.0 39.0 20 32.593901458122794 34.0 30.0 37.0 24.0 39.0 21 32.871718192505206 35.0 31.0 37.0 24.0 39.0 22 33.17694639800359 35.0 31.0 38.0 25.0 39.0 23 34.25655536535566 35.0 33.0 38.0 27.0 40.0 24 32.417934704147505 35.0 31.0 37.0 22.0 39.0 25 31.446736238579412 35.0 29.0 37.0 18.0 39.0 26 30.889306412027967 33.0 26.0 37.0 19.0 39.0 27 32.50477653804113 35.0 30.0 38.0 22.0 40.0 28 32.588434013240665 35.0 31.0 38.0 21.0 40.0 29 32.88309650009281 35.0 31.0 38.0 22.0 40.0 30 31.78545383298616 35.0 30.0 38.0 18.0 40.0 31 31.991152267618123 35.0 30.0 38.0 21.0 40.0 32 31.907100872398786 35.0 30.0 38.0 18.0 40.0 33 32.01385732258131 35.0 31.0 38.0 16.0 40.0 34 31.227326912368262 35.0 30.0 38.0 12.0 40.0 35 30.662410543032152 35.0 28.0 38.0 10.0 40.0 36 29.99116670447749 35.0 25.0 38.0 8.0 40.0 37 30.140697506548147 35.0 26.0 38.0 8.0 40.0 38 29.960333697692164 35.0 25.0 38.0 8.0 40.0 39 29.609146781611567 34.0 24.0 38.0 8.0 40.0 40 29.46765937261534 34.0 23.0 38.0 8.0 40.0 41 28.981485759069443 34.0 23.0 38.0 7.0 40.0 42 29.407711345309053 34.0 23.0 38.0 7.0 40.0 43 29.371179903891765 34.0 23.0 38.0 7.0 40.0 44 29.396056674985047 34.0 23.0 38.0 7.0 40.0 45 29.53739765297915 35.0 23.0 38.0 7.0 40.0 46 29.321327366098128 34.0 23.0 38.0 7.0 40.0 47 29.37331862148617 34.0 23.0 38.0 7.0 40.0 48 29.13478664384268 34.0 23.0 38.0 7.0 40.0 49 28.898999731886896 34.0 23.0 37.0 7.0 40.0 50 29.098915173139194 34.0 23.0 37.0 7.0 40.0 51 27.47810753397818 32.0 20.0 36.0 7.0 39.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 6.0 9 16.0 10 26.0 11 33.0 12 48.0 13 71.0 14 95.0 15 258.0 16 514.0 17 878.0 18 1540.0 19 2389.0 20 3761.0 21 5331.0 22 7482.0 23 10450.0 24 14183.0 25 19200.0 26 24238.0 27 26300.0 28 26106.0 29 26934.0 30 29907.0 31 34168.0 32 39504.0 33 44561.0 34 50088.0 35 53058.0 36 39180.0 37 20257.0 38 4222.0 39 65.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 21.311485552828593 2.560273887846227 37.54305277703302 38.58518778229217 2 38.86381916802442 9.058923010291418 37.43168271907934 14.645575102604822 3 14.064800874461195 9.134613401530308 62.22513250974488 14.575453214263618 4 12.588735124878832 3.0195722564811187 66.24373543424011 18.147957184399942 5 17.27040237589457 3.894239693113618 60.902097469424795 17.93326046156702 6 15.012477571307773 8.969208241384289 63.179202672881395 12.839111514426547 7 57.34609276713346 1.411306123290779 38.06154226906181 3.181058840513952 8 58.760492503145166 5.7578319962051685 32.18017200486729 3.301503495782375 9 54.62350733186215 2.9358384721677977 32.48293356982284 9.957720626147214 10 30.08455874770557 18.689751892259782 37.95388454637326 13.271804813661396 11 21.91845236867614 17.650916740569635 46.05564378080722 14.374987109946996 12 17.555220987068697 16.211355621094313 49.53698929609999 16.696434095737 13 16.543609627322788 16.595788561882564 53.149091509064284 13.711510301730362 14 15.628312743622002 17.775073731103184 49.21607853651494 17.380534988759873 15 13.85959123063914 15.819704250623879 53.978179718275 16.34252480046198 16 15.903231794089137 16.09338585600264 47.96089673520738 20.042485614700848 17 15.956648173737289 16.327262977705363 49.77973477426939 17.93635407428795 18 16.198774929362507 16.08389877699177 49.28620042485615 18.43112586878957 19 16.397797347742692 18.121145874151836 46.962897271433576 18.518159506671893 20 18.32388062779714 18.42060758553839 49.74549879349104 13.51001299317343 21 19.062016623012354 19.767566564233714 46.13257161713449 15.037845195619445 22 17.634004991028522 16.293439478623135 48.12238331924021 17.950172211108132 23 16.885144471714067 20.338234990822283 46.995070843731305 15.781549693732341 24 16.71623321715099 17.899436962484792 47.383216119784684 18.001113700579538 25 15.82609771691381 20.9672695774125 45.17045806092354 18.03617464475014 26 16.324788087528617 18.05803617464475 47.28525171695506 18.331924020871572 27 16.60919421700662 18.394002516138347 46.6706539897292 18.32614927712583 28 15.15251510714212 18.376059562356918 49.0102501701487 17.461175160352262 29 18.9143481757997 17.291026460700806 45.73927031987955 18.05535504361994 30 17.906242910470848 18.707282364345083 47.175531585785876 16.21094313939819 31 18.168375028358117 18.436900612535318 45.73679542970281 17.657928929403756 32 19.13481964237837 21.383257367954297 43.37327531090808 16.108647678759255 33 18.372347227091797 19.422525625425372 41.591973106193414 20.613154041289416 34 19.857487573988905 20.750716686947015 41.653226638067935 17.738569100996145 35 19.386020995318333 22.663600552725473 39.9841194546992 17.966258997256997 36 20.31534225668736 23.244993503413287 38.947140470641614 17.49252376925774 37 19.825107760843114 24.709922247200282 38.243034215356694 17.221935776599913 38 20.579949264751377 23.217150988924868 38.12650813620145 18.0763916101223 39 19.955451976818527 24.046651679831708 36.279208860106834 19.71868748324293 40 21.61795945304927 21.938045249242062 38.95889619898117 17.485099098727495 41 18.360797739600304 24.911625796605275 36.90514983397612 19.822426629818303 42 18.785860127456843 22.796419658877635 39.78241590529421 18.635304308371317 43 20.57788685627075 23.036071524326108 36.336750056716234 20.049291562686903 44 20.71606822447254 22.442097881906488 36.4629694557304 20.378864437890567 45 19.32291129581125 21.70334316414709 37.04023758945697 21.933507950584694 46 20.65068987563677 23.999216284777365 35.914987522428696 19.435106317157178 47 18.07907274114711 21.820075484150394 40.97139439437375 19.12945738032875 48 19.02592447460144 23.122898921360367 36.69725905912925 21.153917544908946 49 18.217666591045024 22.12923051539588 39.1511126693753 20.501990224183803 50 18.571988368016168 21.964031596097925 38.02586260234702 21.438117433538885 51 18.51465341225483 21.282199352403737 36.870088889805515 23.333058345535918 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 124.0 1 460.0 2 796.0 3 20650.0 4 40504.0 5 27384.0 6 14264.0 7 13469.5 8 12675.0 9 12571.5 10 12468.0 11 11856.0 12 11244.0 13 10382.5 14 9521.0 15 8763.0 16 8005.0 17 7276.5 18 6548.0 19 6020.5 20 5493.0 21 5144.5 22 4796.0 23 4785.5 24 4775.0 25 4743.0 26 4828.5 27 4946.0 28 5398.0 29 5850.0 30 6629.5 31 7409.0 32 7939.0 33 8469.0 34 9570.5 35 10672.0 36 11404.5 37 12137.0 38 12865.5 39 13594.0 40 14256.5 41 14919.0 42 15839.5 43 16760.0 44 18166.5 45 19573.0 46 31305.0 47 43037.0 48 37606.0 49 32175.0 50 30592.5 51 29010.0 52 26413.5 53 23817.0 54 22290.5 55 20764.0 56 19687.0 57 18610.0 58 17395.0 59 16180.0 60 14852.5 61 13525.0 62 12357.5 63 11190.0 64 9828.0 65 8466.0 66 7245.0 67 6024.0 68 5065.0 69 4106.0 70 3489.0 71 2872.0 72 2372.5 73 1873.0 74 1573.5 75 1061.0 76 848.0 77 647.0 78 446.0 79 355.5 80 265.0 81 172.5 82 80.0 83 56.5 84 33.0 85 21.5 86 10.0 87 6.5 88 3.0 89 4.5 90 6.0 91 4.5 92 3.0 93 1.5 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 484870.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 45.78460754238323 #Duplication Level Percentage of deduplicated Percentage of total 1 79.389668942731 36.3482483546267 2 7.042524518173397 6.44878442344361 3 3.3160331100246148 4.554698236200765 4 2.1267787574286623 3.8949492295339514 5 1.6522885245218344 3.782469082100782 6 1.2910131809547805 3.5465119093235047 7 1.0086971800707851 3.2327963163054694 8 0.8423512347500883 3.0853376556699774 9 0.646673205485269 2.664691102918619 >10 2.5865466963915424 17.171496311988975 >50 0.06112018103436767 1.9218234754417598 >100 0.031249415867006115 2.822139071160708 >500 0.0018382009333533008 0.6486732838580825 >1k 0.002297751166691626 2.866534161298254 >5k 4.595502333383252E-4 1.3021858429444284 >10k+ 4.595502333383252E-4 5.708661543184397 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 27132 5.5957266896281475 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCGGTAGCTATCGTATGCCG 6189 1.276424608657991 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCGGTAGCTATCGTATGC 4927 1.0161486584032833 No Hit GAATCTGTCTCTTATACACATCTGACGCGGTAGCTATCGTATGCCGTCTTC 4499 0.9278775754325902 No Hit GAACTGTCTCTTATACACATCTGACGCGGTAGCTATCGTATGCCGTCTTCT 1639 0.3380287499742199 No Hit GCTGTCTCTTATACACATCTGACGCGGTAGCTATCGTATGCCGTCTTCTGC 1302 0.2685255841772022 TruSeq Adapter, Index 13 (95% over 21bp) GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCGGTAGCTAT 1257 0.2592447460143956 No Hit GAATGATCTGTCTCTTATACACATCTGACGCGGTAGCTATCGTATGCCGTC 917 0.18912285767319076 No Hit GAATGATACGGCGACTGTCTCTTATACACATCTGACGCGGTAGCTATCGTA 857 0.17674840678944873 No Hit GCTCAACTTGACCCTGCATTAGAAATTGAAGACTGTAAATACAAAATAAAA 663 0.1367376822653495 No Hit GAATGACTGTCTCTTATACACATCTGACGCGGTAGCTATCGTATGCCGTCT 646 0.13323158784828923 No Hit GAATGATACCTGTCTCTTCTACACATCTGACGCGGTAGCTATCGTATGCCG 497 0.10250170148699651 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.08538371109782003 0.0 2 0.0 0.0 0.0 0.5135397116752944 0.0 3 0.0 0.0 0.0 0.6568771010786396 0.0 4 0.0 0.0 0.0 1.2461072039928227 0.0 5 0.0 0.0 0.0 2.533256336750057 0.0 6 0.0 0.0 0.0 2.8380803101862355 0.0 7 0.0 0.0 0.0 3.1629096458844637 0.0 8 0.0 0.0 0.0 3.6281889991131644 0.0 9 0.0 0.0 0.0 3.8055561284468 0.0 10 0.0 0.0 0.0 5.6699733949306 0.0 11 0.0 0.0 0.0 6.2686905768556525 0.0 12 0.0 0.0 0.0 7.913667581001093 0.0 13 0.0 0.0 0.0 8.159919153587559 0.0 14 0.0 0.0 0.0 8.286551034297853 0.0 15 0.0 0.0 0.0 8.678614886464413 0.0 16 0.0 0.0 0.0 8.914966898343886 0.0 17 0.0 0.0 0.0 9.160599748386165 0.0 18 0.0 0.0 0.0 9.40932621114938 0.0 19 0.0 0.0 0.0 9.908841545156434 0.0 20 0.0 0.0 0.0 10.143131148555282 0.0 21 0.0 0.0 0.0 10.41722523563017 0.0 22 0.0 0.0 0.0 10.791552374863365 0.0 23 0.0 0.0 0.0 11.06729638872275 0.0 24 0.0 0.0 0.0 11.288180336997545 0.0 25 0.0 0.0 0.0 11.487615237073856 0.0 26 0.0 0.0 0.0 11.670344628457112 0.0 27 0.0 0.0 0.0 11.855548910017118 0.0 28 0.0 0.0 0.0 12.020747829315074 0.0 29 0.0 0.0 0.0 12.218532802606884 0.0 30 0.0 0.0 0.0 12.449316311588673 0.0 31 0.0 0.0 0.0 12.634933074844804 0.0 32 0.0 0.0 0.0 12.8349866974653 0.0 33 0.0 0.0 0.0 13.025965722771051 0.0 34 0.0 0.0 0.0 13.26108028956215 0.0 35 0.0 0.0 0.0 13.481345515292759 0.0 36 0.0 0.0 0.0 13.677068080103945 0.0 37 0.0 0.0 0.0 13.87609049848413 0.0 38 0.0 0.0 0.0 14.102336708808547 0.0 39 0.0 0.0 0.0 14.422216264153278 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CCTAGCG 20 7.029247E-4 45.0 21 TATGCGT 20 7.029247E-4 45.0 11 GCTTACG 20 7.029247E-4 45.0 1 CTAGCGC 20 7.029247E-4 45.0 22 CGTTTTT 12685 0.0 44.414665 1 TAGGGAT 70 0.0 41.785713 5 TGATACC 765 0.0 41.764706 4 GATACCT 765 0.0 41.764706 5 ACGGCTG 675 0.0 41.333332 8 GAATGAT 2475 0.0 41.18182 1 AATGATA 2350 0.0 40.88298 2 TACGGCT 685 0.0 40.729927 7 ATGATAC 2385 0.0 40.566036 3 AGACACG 190 0.0 40.263157 24 ACACGAC 185 0.0 40.135136 26 AACACGT 180 0.0 40.0 41 GTTTTTT 14385 0.0 39.603752 2 ATCCGGG 40 3.4527147E-7 39.375 3 TATACGG 40 3.4527147E-7 39.375 27 CTTACGG 40 3.4527147E-7 39.375 2 >>END_MODULE