SRR2933321.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2933321.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	563033
Sequences flagged as poor quality	0
Sequence length	51
%GC	38

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	35046	6.224501938607506	No Hit
GAATGATACCTGTCTCTTATACACATCTGACGCACTCACCATCGTATGCCG	8783	1.559944088534775	No Hit
GAATCTGTCTCTTATACACATCTGACGCACTCACCATCGTATGCCGTCTTC	7198	1.278433058097838	No Hit
GAATGATACGGCTGTCTCTTATACACATCTGACGCACTCACCATCGTATGC	6699	1.1898059261180074	No Hit
GAACTGTCTCTTATACACATCTGACGCACTCACCATCGTATGCCGTCTTCT	2719	0.48292018407446813	No Hit
GCTGTCTCTTATACACATCTGACGCACTCACCATCGTATGCCGTCTTCTGC	1820	0.32324925892443246	No Hit
GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCACTCACCAT	1639	0.2911019425149148	No Hit
GAATGATCTGTCTCTTATACACATCTGACGCACTCACCATCGTATGCCGTC	1490	0.2646381295590134	No Hit
GAATGATACGGCGACTGTCTCTTATACACATCTGACGCACTCACCATCGTA	950	0.16872900877923674	No Hit
GAATGACTGTCTCTTATACACATCTGACGCACTCACCATCGTATGCCGTCT	807	0.14333085272088847	No Hit
GAATGCTGTCTCTTATACACATCTGACGCACTCACCATCGTATGCCGTCTT	746	0.13249667426243222	No Hit
GAATGATACCTGTCTCTTCTACACATCTGACGCACTCACCATCGTATGCCG	731	0.12983253201854955	No Hit
GCTCAACTTGACCCTGCATTAGAAATTGAAGACTGTAAATACAAAATAAAA	707	0.12556990442833724	No Hit
GAATCTTTCTCTTATACACATCTGACGCACTCACCATCGTATGCCGTCTTC	685	0.12166249580397596	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
ATACTCG	20	7.030217E-4	45.0	44
TATTGCG	20	7.030217E-4	45.0	1
CGTTTTT	14045	0.0	44.359203	1
TACGGCT	1020	0.0	42.132355	7
GATACCT	1260	0.0	41.785713	5
TGATACC	1270	0.0	41.279526	4
GAATGAT	3470	0.0	41.239193	1
ATGATAC	3315	0.0	41.199093	3
AATGATA	3300	0.0	41.045452	2
ACGGCTG	1060	0.0	40.542454	8
TATACGG	50	1.0786607E-9	40.5	27
GTTTTTT	15595	0.0	40.35428	2
CACCGGT	145	0.0	40.34483	16
CCTGCAT	230	0.0	40.1087	13
GAATCTG	1010	0.0	40.09901	1
TGATACG	2145	0.0	39.96504	4
ATACGGC	2130	0.0	39.929577	6
CGGCTGT	1015	0.0	39.901478	9
GCATTAG	220	0.0	39.886364	16
GATACGG	2150	0.0	39.767437	5