##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2933321.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 563033 Sequences flagged as poor quality 0 Sequence length 51 %GC 38 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 28.581028110252863 31.0 28.0 31.0 16.0 33.0 2 28.89599011070399 31.0 30.0 33.0 16.0 34.0 3 29.1207957615273 31.0 30.0 33.0 16.0 34.0 4 32.05746732429538 35.0 30.0 37.0 19.0 37.0 5 33.53568618535681 35.0 33.0 37.0 28.0 37.0 6 32.79795678050842 35.0 33.0 37.0 19.0 37.0 7 31.794624826608743 35.0 30.0 35.0 25.0 37.0 8 32.99284056174327 35.0 32.0 35.0 28.0 37.0 9 32.66295226034708 35.0 31.0 37.0 25.0 39.0 10 31.027151161654825 35.0 27.0 38.0 15.0 39.0 11 32.129866277820305 35.0 27.0 39.0 16.0 39.0 12 32.92031905767513 35.0 31.0 39.0 23.0 39.0 13 33.15839924125229 35.0 31.0 39.0 25.0 39.0 14 33.27449900805104 36.0 31.0 39.0 18.0 41.0 15 33.85517900371737 36.0 32.0 39.0 24.0 41.0 16 33.99368953507166 36.0 32.0 40.0 25.0 41.0 17 31.901130129139855 35.0 27.0 39.0 17.0 41.0 18 32.76332293133795 36.0 30.0 39.0 21.0 39.0 19 32.66611903742765 36.0 30.0 37.0 19.0 39.0 20 32.53905721334274 34.0 30.0 37.0 24.0 39.0 21 32.87784374983349 35.0 31.0 37.0 24.0 39.0 22 33.343166386339696 35.0 31.0 38.0 26.0 39.0 23 34.38715492697586 35.0 33.0 39.0 27.0 40.0 24 32.600378663417594 35.0 31.0 37.0 22.0 39.0 25 31.493560768196534 35.0 29.0 37.0 18.0 39.0 26 31.158313988700485 33.0 27.0 37.0 20.0 39.0 27 32.81562714796468 35.0 31.0 38.0 23.0 40.0 28 32.810286430813115 35.0 31.0 38.0 22.0 40.0 29 33.14031504370082 35.0 31.0 38.0 22.0 40.0 30 31.99341601646795 35.0 30.0 38.0 19.0 40.0 31 32.25361035676417 35.0 30.0 38.0 21.0 40.0 32 32.29211964485208 35.0 30.0 38.0 20.0 40.0 33 32.45325940042591 35.0 31.0 38.0 18.0 40.0 34 31.740041880316074 35.0 31.0 38.0 15.0 40.0 35 31.286260308010366 35.0 30.0 38.0 12.0 40.0 36 30.753049998845537 35.0 29.0 38.0 10.0 40.0 37 31.00531762791879 35.0 30.0 38.0 10.0 40.0 38 30.855520013924583 35.0 29.0 38.0 10.0 40.0 39 30.444442865693485 35.0 27.0 38.0 9.0 40.0 40 30.163970850731662 35.0 26.0 38.0 8.0 40.0 41 29.667506167489293 34.0 24.0 38.0 8.0 40.0 42 30.15071585502093 35.0 26.0 38.0 8.0 40.0 43 30.13662964693011 35.0 26.0 38.0 8.0 40.0 44 30.196897872771224 35.0 26.0 38.0 8.0 40.0 45 30.455220209117407 35.0 27.0 38.0 8.0 40.0 46 30.222312013683034 35.0 26.0 38.0 8.0 40.0 47 30.249496921139613 35.0 26.0 38.0 7.0 40.0 48 30.02946718931217 35.0 26.0 38.0 8.0 40.0 49 29.81893246044193 34.0 26.0 38.0 8.0 40.0 50 30.006335330255954 35.0 26.0 38.0 8.0 40.0 51 28.377890816346465 33.0 23.0 36.0 7.0 39.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 5.0 9 19.0 10 26.0 11 36.0 12 35.0 13 64.0 14 122.0 15 247.0 16 431.0 17 875.0 18 1562.0 19 2634.0 20 3893.0 21 5671.0 22 7903.0 23 10983.0 24 14648.0 25 19780.0 26 25162.0 27 27143.0 28 27988.0 29 29805.0 30 34167.0 31 40239.0 32 47843.0 33 55058.0 34 62430.0 35 66511.0 36 47435.0 37 25266.0 38 4964.0 39 88.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 21.717554743682875 2.7147609465164564 39.20516204201175 36.36252226778892 2 35.93252970962625 10.927778655957999 38.34997238172541 14.78971925269034 3 13.27186861160891 10.721929265247331 60.902114085675265 15.104088037468497 4 12.105684746719996 2.9868586743583414 66.50729175732151 18.400164821600153 5 17.89451062371122 3.949679681297544 59.95030486667744 18.205504828313792 6 15.413661366207664 9.642418828026065 62.224416686055704 12.719503119710568 7 57.930885045814364 1.241667895132257 37.481284400736726 3.346162658316653 8 59.421028607559414 6.488429630234817 30.43462816566702 3.6559135965387464 9 55.014182117211604 2.8513426388861753 30.665165274504336 11.469309969397887 10 30.24121143876114 20.25067802420107 36.3630550962377 13.145055440800096 11 20.91866728948392 17.920796827184198 45.947040404381276 15.213495478950612 12 17.744075391673313 16.16743601174354 48.55221629993269 17.536272296650463 13 16.83347157271421 17.076618954839237 52.03034280406299 14.059566668383559 14 15.20052998669705 18.905463800523236 47.27325041338607 18.620755799393642 15 12.648281717057436 17.500928009548286 53.019094795509325 16.831695477884956 16 14.889535782094477 17.432370749139036 46.05147478034147 21.626618688425012 17 15.041747108961642 18.247775885250064 48.12027003745784 18.590206968330452 18 14.833766404455867 17.858633508160267 48.089543596911724 19.218056490472136 19 15.227704237584652 20.04127644383189 45.353469512444214 19.37754980613925 20 16.96135040042058 19.70683778748315 48.72680642164847 14.605005390447806 21 17.274120699852407 21.56818516854252 45.61899568941785 15.538698442187226 22 15.966382077071858 17.587068608767158 46.78358106896043 19.66296824520055 23 15.883971276994421 21.52857825385013 46.076517717433966 16.51093275172148 24 16.29407157306943 18.477957775121528 46.230149920164536 18.997820731644506 25 14.749579509549173 22.709858924787714 43.64113648755934 18.89942507810377 26 15.377429031690859 19.411473217378024 46.004941095814985 19.20615665511613 27 15.805467885541344 19.380036338900204 44.876765660272135 19.937730115286314 28 13.93204305964304 19.64982514346406 47.56488518434976 18.85324661254314 29 15.888589123550483 19.27826610518389 44.38194564084166 20.451199130423973 30 14.550124060223823 20.94282217916179 45.77173984473379 18.735313915880596 31 16.169389716055722 19.44521901913387 44.26934122866688 20.11605003614353 32 16.901673614157605 22.43918207280923 41.32137903106923 19.337765281963932 33 15.154351521136416 22.01096560947582 40.31770784305716 22.516975026330606 34 16.23226347301135 23.43113103494822 39.45399292759039 20.88261256445004 35 15.120428109897643 23.617443382537083 37.39905121014221 23.863077297423064 36 16.264588398903797 25.86296007516433 38.15424673154149 19.71820479439038 37 15.591448458616103 23.872490600018118 37.9753939822355 22.56066695913028 38 17.087808352263544 24.94738319068332 38.13666339273186 19.828145064321273 39 17.705178914912626 24.246180952093393 35.87072160956818 22.177918523425802 40 17.988288430695892 24.29182658920525 37.123046073675965 20.596838906422892 41 16.793687048538896 26.328296920429175 35.888127338894876 20.98988869213705 42 16.700619679485925 23.386195835768063 38.587436260396814 21.325748224349194 43 18.6406480614813 24.82501025694764 35.77179312757867 20.762548553992392 44 18.76834927970474 22.9931460500539 36.19841110556575 22.040093564675605 45 17.165601305784918 22.423019609863008 36.86959734154126 23.541781742810812 46 19.478076773475088 24.19094440290356 35.81299852761738 20.517980296003966 47 15.769945988956241 22.71785135151936 41.34304738798614 20.16915527153826 48 17.46984635003632 23.39187933922168 36.445110677349284 22.693163633392714 49 16.338651553283732 21.908307328344875 39.66019753726691 22.092843581104482 50 17.355110624066437 21.97295718012976 38.269160066994296 22.402772128809502 51 17.013745197883605 21.807602751526108 36.82572779925866 24.352924251331626 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 115.0 1 531.0 2 947.0 3 24578.0 4 48209.0 5 31539.0 6 14869.0 7 13843.5 8 12818.0 9 12598.5 10 12379.0 11 11779.0 12 11179.0 13 10679.0 14 10179.0 15 9288.0 16 8397.0 17 7811.0 18 7225.0 19 6609.0 20 5993.0 21 5646.5 22 5300.0 23 5230.0 24 5160.0 25 5189.5 26 5755.5 27 6292.0 28 7018.5 29 7745.0 30 8904.0 31 10063.0 32 10854.5 33 11646.0 34 12571.5 35 13497.0 36 14599.0 37 15701.0 38 16799.0 39 17897.0 40 18835.5 41 19774.0 42 20748.0 43 21722.0 44 23688.5 45 25655.0 46 42542.5 47 59430.0 48 49937.0 49 40444.0 50 37392.5 51 34341.0 52 30071.5 53 25802.0 54 23480.5 55 21159.0 56 19780.5 57 18402.0 58 17140.0 59 15878.0 60 14498.0 61 13118.0 62 11845.0 63 10572.0 64 9497.0 65 8422.0 66 7306.0 67 6190.0 68 5171.0 69 4152.0 70 3374.5 71 2597.0 72 2152.5 73 1708.0 74 1437.0 75 1008.0 76 850.0 77 649.5 78 449.0 79 319.0 80 189.0 81 141.5 82 94.0 83 73.0 84 52.0 85 36.0 86 20.0 87 12.0 88 4.0 89 6.5 90 9.0 91 5.5 92 2.0 93 2.0 94 2.0 95 1.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 563033.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 45.53700922312507 #Duplication Level Percentage of deduplicated Percentage of total 1 79.24084834131037 36.08391241766505 2 7.478156709754755 6.810657821281538 3 3.4001938506144205 4.64503976207526 4 2.2365664441508906 4.073861871817246 5 1.6088633651353106 3.6631412948457336 6 1.2346859584173968 3.3734343525669606 7 0.9416695636456159 3.00165709234066 8 0.7578284247169643 2.76073919727062 9 0.6289268687139272 2.5775503759167546 >10 2.391952501301475 15.794296935690443 >50 0.040153986135300725 1.2517026442613723 >100 0.03339539438314316 3.005607070779351 >500 0.0035780779696224815 1.1195442793458323 >1k 0.0015902568753877696 1.3882059401720315 >5k 0.001192692656540827 4.1059612314947405 >10k+ 3.975642188469424E-4 6.3446877124763965 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 35046 6.224501938607506 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCACTCACCATCGTATGCCG 8783 1.559944088534775 No Hit GAATCTGTCTCTTATACACATCTGACGCACTCACCATCGTATGCCGTCTTC 7198 1.278433058097838 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCACTCACCATCGTATGC 6699 1.1898059261180074 No Hit GAACTGTCTCTTATACACATCTGACGCACTCACCATCGTATGCCGTCTTCT 2719 0.48292018407446813 No Hit GCTGTCTCTTATACACATCTGACGCACTCACCATCGTATGCCGTCTTCTGC 1820 0.32324925892443246 No Hit GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCACTCACCAT 1639 0.2911019425149148 No Hit GAATGATCTGTCTCTTATACACATCTGACGCACTCACCATCGTATGCCGTC 1490 0.2646381295590134 No Hit GAATGATACGGCGACTGTCTCTTATACACATCTGACGCACTCACCATCGTA 950 0.16872900877923674 No Hit GAATGACTGTCTCTTATACACATCTGACGCACTCACCATCGTATGCCGTCT 807 0.14333085272088847 No Hit GAATGCTGTCTCTTATACACATCTGACGCACTCACCATCGTATGCCGTCTT 746 0.13249667426243222 No Hit GAATGATACCTGTCTCTTCTACACATCTGACGCACTCACCATCGTATGCCG 731 0.12983253201854955 No Hit GCTCAACTTGACCCTGCATTAGAAATTGAAGACTGTAAATACAAAATAAAA 707 0.12556990442833724 No Hit GAATCTTTCTCTTATACACATCTGACGCACTCACCATCGTATGCCGTCTTC 685 0.12166249580397596 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.11136114579429625 0.0 2 0.0 0.0 0.0 0.6163049057515279 0.0 3 0.0 0.0 0.0 0.7978217973014016 0.0 4 0.0 0.0 0.0 1.6432429360268404 0.0 5 0.0 0.0 0.0 3.4468672351354184 0.0 6 0.0 0.0 0.0 3.962822783034032 0.0 7 0.0 0.0 0.0 4.448762328318233 0.0 8 0.0 0.0 0.0 5.113554622908426 0.0 9 0.0 0.0 0.0 5.390270197306375 0.0 10 0.0 0.0 0.0 7.579839902812091 0.0 11 0.0 0.0 0.0 8.206623768056224 0.0 12 0.0 0.0 0.0 10.082002298266708 0.0 13 0.0 0.0 0.0 10.352146321796413 0.0 14 0.0 0.0 0.0 10.502226334868471 0.0 15 0.0 0.0 0.0 10.881955409363217 0.0 16 0.0 0.0 0.0 11.111426861302979 0.0 17 0.0 0.0 0.0 11.368072564130344 0.0 18 0.0 0.0 0.0 11.619567591952869 0.0 19 0.0 0.0 0.0 12.196087973529083 0.0 20 0.0 0.0 0.0 12.447227782385758 0.0 21 0.0 0.0 0.0 12.740283429212852 0.0 22 0.0 0.0 0.0 13.130491463200203 0.0 23 0.0 0.0 0.0 13.437045430729638 0.0 24 0.0 0.0 0.0 13.681258469752217 0.0 25 0.0 0.0 0.0 13.913926892384637 0.0 26 0.0 0.0 0.0 14.131853727934242 0.0 27 0.0 0.0 0.0 14.335394195366879 0.0 28 0.0 0.0 0.0 14.53715856797026 0.0 29 0.0 0.0 0.0 14.756506279383268 0.0 30 0.0 0.0 0.0 15.02558464601542 0.0 31 0.0 0.0 0.0 15.246886061740609 0.0 32 0.0 0.0 0.0 15.479376874890104 0.0 33 0.0 0.0 0.0 15.690021721639761 0.0 34 0.0 0.0 0.0 15.925531895998992 0.0 35 0.0 0.0 0.0 16.190525244523855 0.0 36 0.0 0.0 0.0 16.415378849907555 0.0 37 0.0 0.0 0.0 16.635081780286413 0.0 38 0.0 0.0 0.0 16.86437562274325 0.0 39 0.0 0.0 0.0 17.213200647208957 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ATACTCG 20 7.030217E-4 45.0 44 TATTGCG 20 7.030217E-4 45.0 1 CGTTTTT 14045 0.0 44.359203 1 TACGGCT 1020 0.0 42.132355 7 GATACCT 1260 0.0 41.785713 5 TGATACC 1270 0.0 41.279526 4 GAATGAT 3470 0.0 41.239193 1 ATGATAC 3315 0.0 41.199093 3 AATGATA 3300 0.0 41.045452 2 ACGGCTG 1060 0.0 40.542454 8 TATACGG 50 1.0786607E-9 40.5 27 GTTTTTT 15595 0.0 40.35428 2 CACCGGT 145 0.0 40.34483 16 CCTGCAT 230 0.0 40.1087 13 GAATCTG 1010 0.0 40.09901 1 TGATACG 2145 0.0 39.96504 4 ATACGGC 2130 0.0 39.929577 6 CGGCTGT 1015 0.0 39.901478 9 GCATTAG 220 0.0 39.886364 16 GATACGG 2150 0.0 39.767437 5 >>END_MODULE