##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2933320.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 374653 Sequences flagged as poor quality 0 Sequence length 51 %GC 39 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 29.317838106194266 31.0 28.0 31.0 25.0 34.0 2 28.438653901076464 31.0 27.0 33.0 16.0 34.0 3 28.488153037610804 31.0 26.0 34.0 16.0 34.0 4 32.98323515359546 35.0 32.0 37.0 28.0 37.0 5 34.1568304537799 35.0 33.0 37.0 30.0 37.0 6 33.45371850752563 35.0 33.0 37.0 28.0 37.0 7 33.40552724788004 35.0 32.0 37.0 28.0 37.0 8 33.36268760693228 35.0 33.0 37.0 28.0 37.0 9 34.530536256215754 37.0 34.0 39.0 28.0 39.0 10 34.33594819739866 37.0 32.0 39.0 27.0 39.0 11 34.67602554897465 37.0 33.0 39.0 27.0 39.0 12 34.7648570810857 37.0 33.0 39.0 27.0 39.0 13 34.99693583128922 37.0 34.0 39.0 27.0 39.0 14 35.66876015940083 38.0 34.0 40.0 27.0 41.0 15 36.01819550357264 38.0 34.0 40.0 27.0 41.0 16 35.99599896437503 38.0 34.0 40.0 30.0 41.0 17 35.25273786677272 37.0 33.0 40.0 27.0 41.0 18 35.07854201087406 37.0 33.0 39.0 27.0 40.0 19 34.51229003904947 37.0 33.0 38.0 27.0 40.0 20 33.958452221121945 35.0 32.0 38.0 27.0 40.0 21 34.35860649721209 35.0 33.0 38.0 27.0 40.0 22 34.98951830093446 36.0 33.0 39.0 29.0 40.0 23 35.262162587781226 36.0 34.0 39.0 30.0 40.0 24 34.795458731145885 36.0 33.0 39.0 27.0 40.0 25 33.64501285189228 35.0 32.0 39.0 24.0 40.0 26 33.81693994175944 35.0 32.0 38.0 25.0 40.0 27 34.50993319151321 35.0 33.0 39.0 27.0 40.0 28 34.28733521418486 35.0 33.0 39.0 25.0 40.0 29 34.35695697085036 36.0 33.0 39.0 25.0 40.0 30 33.61628760479697 35.0 33.0 39.0 23.0 40.0 31 33.73232831446699 35.0 33.0 39.0 23.0 40.0 32 33.31512092522948 35.0 33.0 39.0 21.0 40.0 33 32.99349798346737 36.0 32.0 39.0 16.0 40.0 34 32.5495378390137 36.0 31.0 40.0 13.0 41.0 35 32.17301075928926 36.0 31.0 40.0 10.0 41.0 36 31.65814767264642 36.0 30.0 40.0 8.0 41.0 37 31.570744128566968 36.0 30.0 40.0 8.0 41.0 38 31.42814284150934 36.0 29.0 40.0 8.0 41.0 39 30.998238369904954 35.0 28.0 39.0 8.0 40.0 40 30.96226107891836 35.0 27.0 39.0 8.0 40.0 41 30.40320776825489 35.0 24.0 39.0 8.0 40.0 42 30.727833488588107 35.0 26.0 39.0 7.0 40.0 43 30.649456964177517 35.0 26.0 39.0 7.0 40.0 44 30.72048802491906 36.0 26.0 39.0 7.0 40.0 45 30.853640568739607 36.0 26.0 39.0 7.0 40.0 46 30.568253824205332 35.0 25.0 39.0 7.0 40.0 47 30.513339009696974 35.0 25.0 39.0 7.0 40.0 48 30.369880929820393 35.0 25.0 39.0 7.0 40.0 49 30.581244511588057 35.0 26.0 39.0 7.0 40.0 50 30.447592839240578 35.0 25.0 39.0 7.0 40.0 51 29.286035344705635 34.0 23.0 38.0 7.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 3.0 9 18.0 10 16.0 11 21.0 12 47.0 13 40.0 14 64.0 15 113.0 16 175.0 17 347.0 18 687.0 19 1295.0 20 2105.0 21 3111.0 22 4358.0 23 6137.0 24 8427.0 25 12247.0 26 15852.0 27 16748.0 28 15810.0 29 15210.0 30 16031.0 31 18468.0 32 22126.0 33 26053.0 34 30538.0 35 36208.0 36 40199.0 37 42945.0 38 34133.0 39 5120.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 28.274163025519616 2.8458333444547357 34.890952427980025 33.98905120204563 2 32.724414324721806 17.919781771399133 35.07752506986465 14.278278834014408 3 12.55321590912124 17.964089437426097 55.26527213181264 14.217422521640025 4 11.348634603219512 2.8210103749336053 69.20403680205418 16.626318219792715 5 22.9054618540356 3.5184557443821345 55.373905987673936 18.202176413908337 6 14.272940560999112 15.749773790680976 58.55444905018777 11.422836598132138 7 57.12779558684969 1.04149706528441 39.16744294053431 2.663264407331584 8 55.99875084411442 11.520793907962835 29.228913154305452 3.251542093617294 9 52.915364350478974 2.8589121133422126 28.110278043950004 16.115445492228808 10 32.59175824029168 20.980480604719567 34.13211691885558 12.29564423613317 11 23.951496451383015 17.734009870466807 43.95640766255708 14.358086015593097 12 18.23046926088941 16.358870741726346 45.76928517855189 19.64137481883236 13 17.667815285077122 17.316556920670596 52.09860857913856 12.917019215113717 14 16.084750422390854 23.4171353225518 43.358787998494606 17.13932625656274 15 12.884455749720408 17.036564501018276 53.69448529706155 16.384494452199768 16 14.907127395216374 19.354442644260157 43.32061934643524 22.417810614088236 17 15.301625771046808 19.45133229948779 48.39384710652257 16.85319482294283 18 15.347001091676832 18.247017907236827 46.63034861591927 19.775632385167075 19 15.284810211048624 20.443450339380707 44.07198127333826 20.199758176232407 20 18.213119873589694 20.105270743861652 48.562803447456716 13.118805935091938 21 17.82182446156844 24.58648402655257 43.89875431399188 13.692937197887112 22 15.89337333479246 16.393302602675007 47.25893026347047 20.454393799062064 23 16.038574360808536 23.53724646539598 45.79277357981919 14.631405593976293 24 17.16815293084534 19.304262877916365 43.7983947813043 19.72918940993399 25 14.462716166692912 27.765425607161827 41.348394380933826 16.423463845211437 26 15.121192143129777 18.66660616623916 45.925429664249314 20.286772026381744 27 17.831433352995973 21.137692745020058 41.991389365626326 19.03948453635764 28 13.029389862085717 21.26287524722877 47.51062983614171 18.197105054543805 29 17.917112634891485 18.103685276776112 42.514540121125414 21.46466196720699 30 15.212476611691352 25.20065233696247 44.92316890562734 14.663702145718837 31 18.866791404312792 18.03402081392649 43.60755152100744 19.491636260753285 32 22.819782572140088 22.493347177254684 39.628135901754426 15.058734348850802 33 20.398875759702978 19.43745278964802 38.26794393745679 21.895727513192206 34 18.955139822715953 20.93830824789872 41.444216381558405 18.66233554782692 35 17.853587186009452 24.528296850685834 39.26006197734971 18.358053985955003 36 20.853963534257034 21.895193685890675 37.141034503927635 20.109808275924657 37 20.22404731845201 24.919859176357857 38.56742105361495 16.288672451575188 38 22.328661454732778 22.425818023611182 36.44198765257451 18.803532869081526 39 23.74837516315097 22.584898559467025 36.36698491670959 17.299741360672407 40 21.40514022308643 23.12272956575818 37.946046074634395 17.526084136520996 41 21.071498159630377 25.028493032219146 35.642047441232286 18.257961366918188 42 18.774973108449686 22.557673367089013 40.690185318147726 17.977168206313575 43 24.156753048821177 21.525518279581373 32.31016433873478 22.007564332862675 44 20.963665044721385 23.576749685709174 34.613095317533826 20.846489952035615 45 18.354317194844295 21.512973337995426 35.922840601836896 24.20986886532338 46 25.099492063322593 24.560326488777616 31.865753110211315 18.474428337688476 47 18.02361118154666 21.96165518493112 41.028364913666785 18.98636871985544 48 20.18828088924952 24.13780217961687 33.11811195959995 22.555804971533657 49 18.217924319303464 21.38805774943748 39.71861962936371 20.675398301895353 50 21.242322896119877 20.971939367895093 35.75708722471193 22.0286505112731 51 19.19642976300737 21.506834324027835 33.69784840906119 25.59888750390361 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 23.0 1 421.0 2 819.0 3 9692.5 4 18566.0 5 13886.0 6 9206.0 7 8905.0 8 8604.0 9 8369.0 10 8134.0 11 7897.5 12 7661.0 13 7214.0 14 6767.0 15 6398.5 16 6030.0 17 5612.5 18 5195.0 19 4789.5 20 4384.0 21 4189.5 22 3995.0 23 3948.5 24 3902.0 25 3955.5 26 4397.0 27 4785.0 28 5219.5 29 5654.0 30 6109.0 31 6564.0 32 7141.0 33 7718.0 34 8375.0 35 9032.0 36 9750.0 37 10468.0 38 11466.5 39 12465.0 40 12900.5 41 13336.0 42 14243.0 43 15150.0 44 16636.0 45 18122.0 46 39279.0 47 60436.0 48 43143.0 49 25850.0 50 23872.5 51 21895.0 52 19500.0 53 17105.0 54 15628.5 55 14152.0 56 13379.0 57 12606.0 58 11254.5 59 9903.0 60 8508.0 61 7113.0 62 6155.5 63 5198.0 64 4246.5 65 3295.0 66 2741.0 67 2187.0 68 1761.0 69 1335.0 70 1125.5 71 916.0 72 758.0 73 600.0 74 603.5 75 506.0 76 405.0 77 344.0 78 283.0 79 207.0 80 131.0 81 82.5 82 34.0 83 18.5 84 3.0 85 5.0 86 7.0 87 4.0 88 1.0 89 1.5 90 2.0 91 1.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 374653.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 43.705814284085285 #Duplication Level Percentage of deduplicated Percentage of total 1 83.31345995509223 36.41282608161838 2 5.122729878079088 4.47786161357719 3 2.201004198490046 2.8859004221309386 4 1.4968849120230119 2.6169029587810844 5 1.1518485913055871 2.517124030749363 6 0.9989079907089501 2.6194852277288496 7 0.8435259839046493 2.580689299743584 8 0.6910995941731102 2.416405641178933 9 0.6417261649585182 2.524244812822375 >10 3.44684624306179 23.11964658674847 >50 0.05678467727972149 1.6884472696839108 >100 0.02777511388682029 2.0472321983753314 >500 0.001234449506080902 0.3436781948517818 >1k 0.003703348518242706 3.215576203008822 >5k 0.001234449506080902 5.025416869618401 >10k+ 0.001234449506080902 5.508562589382563 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GAATCTGTCTCTTATACACATCTGACGCCATGGTTGTCGTATGCCGTCTTC 10232 2.7310604746258536 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCCATGGTTGTCGTATGCCG 10188 2.719316273992201 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCCATGGTTGTCGTATGC 9538 2.5458224009950543 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 9091 2.4265119991031705 No Hit GAACTGTCTCTTATACACATCTGACGCCATGGTTGTCGTATGCCGTCTTCT 2480 0.6619458538968058 No Hit GAATGATCTGTCTCTTATACACATCTGACGCCATGGTTGTCGTATGCCGTC 2175 0.5805371904135292 No Hit GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCCATGGTTGT 2124 0.5669245942245225 No Hit GAATGATACGGCGACTGTCTCTTATACACATCTGACGCCATGGTTGTCGTA 1737 0.46362901137852897 No Hit GCTGTCTCTTATACACATCTGACGCCATGGTTGTCGTATGCCGTCTTCTGC 1736 0.46336209772776404 TruSeq Adapter, Index 22 (95% over 22bp) GAATGACTGTCTCTTATACACATCTGACGCCATGGTTGTCGTATGCCGTCT 1668 0.4452119694757549 No Hit GAATGATACGGCGACCTGTCTCTTATACACATCTGACGCCATGGTTGTCGT 703 0.18764029648768327 No Hit GAATGCTGTCTCTTATACACATCTGACGCCATGGTTGTCGTATGCCGTCTT 571 0.15240769458672423 No Hit GAATGATACGGCCTGTCTCTTATACACATCTGACGCCATGGTTGTCGTATG 467 0.12464867490718079 No Hit GAATGATACGGCGCTGTCTCTTATACACATCTGACGCCATGGTTGTCGTAT 446 0.11904348824111911 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.08861533205392723 0.0 2 0.0 0.0 0.0 0.6512693078662122 0.0 3 0.0 0.0 0.0 0.7388169853170801 0.0 4 2.669136507648411E-4 0.0 0.0 1.5320843553901877 0.0 5 2.669136507648411E-4 0.0 0.0 4.7596042204386455 0.0 6 2.669136507648411E-4 0.0 0.0 5.004897865491535 0.0 7 2.669136507648411E-4 0.0 0.0 5.5867696241588884 0.0 8 2.669136507648411E-4 0.0 0.0 6.33999994661727 0.0 9 2.669136507648411E-4 0.0 0.0 6.452637507240032 0.0 10 2.669136507648411E-4 0.0 0.0 9.722863556410866 0.0 11 2.669136507648411E-4 0.0 0.0 9.932924599562796 0.0 12 2.669136507648411E-4 0.0 0.0 13.114268403028936 0.0 13 2.669136507648411E-4 0.0 0.0 13.378779830936894 0.0 14 2.669136507648411E-4 0.0 0.0 13.566953954726106 0.0 15 2.669136507648411E-4 0.0 0.0 14.217689435290788 0.0 16 2.669136507648411E-4 0.0 0.0 14.525707788273415 0.0 17 2.669136507648411E-4 0.0 0.0 14.686923633335379 0.0 18 2.669136507648411E-4 0.0 0.0 14.815576013004033 0.0 19 2.669136507648411E-4 0.0 0.0 15.649948085294927 0.0 20 2.669136507648411E-4 0.0 0.0 15.821840476387484 0.0 21 2.669136507648411E-4 0.0 0.0 15.964639279546674 0.0 22 2.669136507648411E-4 0.0 0.0 16.244097871897463 0.0 23 2.669136507648411E-4 0.0 0.0 16.386095934104357 0.0 24 2.669136507648411E-4 0.0 0.0 16.52889473726355 0.0 25 2.669136507648411E-4 0.0 0.0 16.634058715664896 0.0 26 2.669136507648411E-4 0.0 0.0 16.776323691522556 0.0 27 2.669136507648411E-4 0.0 0.0 16.954888923884234 0.0 28 2.669136507648411E-4 0.0 0.0 17.059519074984053 0.0 29 2.669136507648411E-4 0.0 0.0 17.192175159414177 0.0 30 2.669136507648411E-4 0.0 0.0 17.333639394319544 0.0 31 2.669136507648411E-4 0.0 0.0 17.466562392400434 0.0 32 2.669136507648411E-4 0.0 0.0 17.598150822227502 0.0 33 2.669136507648411E-4 0.0 0.0 17.737212834275983 0.0 34 2.669136507648411E-4 0.0 0.0 17.952345236792446 0.0 35 2.669136507648411E-4 0.0 0.0 18.115696391060528 0.0 36 2.669136507648411E-4 0.0 0.0 18.270506308504135 0.0 37 2.669136507648411E-4 0.0 0.0 18.431455239915334 0.0 38 2.669136507648411E-4 0.0 0.0 18.612956522435425 0.0 39 2.669136507648411E-4 0.0 0.0 18.841167693839367 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGGCTAT 25 3.8857546E-5 45.000004 31 CGTATGG 20 7.027193E-4 45.0 2 CACGGAT 20 7.027193E-4 45.0 15 CGACCCG 20 7.027193E-4 45.0 32 CGTCTTG 20 7.027193E-4 45.0 1 CCGCTTG 20 7.027193E-4 45.0 1 TGGCACG 20 7.027193E-4 45.0 22 TCTACGG 20 7.027193E-4 45.0 2 TTGCACG 20 7.027193E-4 45.0 1 TGCACGG 35 1.2089913E-7 45.0 2 CCCGATC 45 3.8380676E-10 45.0 41 CGTTTTT 7275 0.0 44.319584 1 CGATGAA 345 0.0 43.04348 19 GCGACCT 110 0.0 42.954544 11 GAATGAC 175 0.0 42.42857 1 CGGCTGT 1200 0.0 42.375 9 ACGGCTG 1205 0.0 42.19917 8 TACGGCT 1210 0.0 41.83884 7 TGATACC 1175 0.0 41.74468 4 CCGATGA 345 0.0 41.739132 18 >>END_MODULE