SRR2933319.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2933319.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	244378
Sequences flagged as poor quality	0
Sequence length	51
%GC	38

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	12639	5.171905818035993	No Hit
GAATGATACCTGTCTCTTATACACATCTGACGCCATGGTTGTCGTATGCCG	4673	1.9122015893411028	No Hit
GAATGATACGGCTGTCTCTTATACACATCTGACGCCATGGTTGTCGTATGC	3708	1.5173215264876543	No Hit
GAATCTGTCTCTTATACACATCTGACGCCATGGTTGTCGTATGCCGTCTTC	2915	1.1928242313137845	No Hit
GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCCATGGTTGT	1039	0.4251610210411739	No Hit
GCTGTCTCTTATACACATCTGACGCCATGGTTGTCGTATGCCGTCTTCTGC	1013	0.4145217654617028	TruSeq Adapter, Index 22 (95% over 22bp)
GAACTGTCTCTTATACACATCTGACGCCATGGTTGTCGTATGCCGTCTTCT	972	0.3977444778171521	No Hit
GAATGATCTGTCTCTTATACACATCTGACGCCATGGTTGTCGTATGCCGTC	715	0.29257952843545654	No Hit
GAATGATACGGCGACTGTCTCTTATACACATCTGACGCCATGGTTGTCGTA	615	0.2516593146682598	No Hit
GAATGACTGTCTCTTATACACATCTGACGCCATGGTTGTCGTATGCCGTCT	477	0.19518941966952835	No Hit
GAATGATACCTGTCTCTTCTACACATCTGACGCCATGGTTGTCGTATGCCG	431	0.17636612133661786	No Hit
CTGTCTCTTATACACATCTGACGCCATGGTTGTCGTATGCCGTCTTCTGCT	284	0.11621340709883868	TruSeq Adapter, Index 23 (95% over 22bp)
GAATCTTTCTCTTATACACATCTGACGCCATGGTTGTCGTATGCCGTCTTC	266	0.10884776862074327	No Hit
GAATGATACGGCGACCTGTCTCTTATACACATCTGACGCCATGGTTGTCGT	255	0.10434654510635163	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CAGCGCT	30	2.1584638E-6	45.000004	26
AGCGCTC	30	2.1584638E-6	45.000004	27
GAAATCG	20	7.0223754E-4	45.0	17
GGTACCA	20	7.0223754E-4	45.0	8
ACCGGGA	20	7.0223754E-4	45.0	4
TTGTGCG	35	1.2066812E-7	45.0	1
CACGGGA	50	2.1827873E-11	45.0	4
GGGTACC	40	6.7775545E-9	45.0	7
TACGGGA	20	7.0223754E-4	45.0	4
TGCGGAT	20	7.0223754E-4	45.0	4
CCGCTGA	20	7.0223754E-4	45.0	18
ACGGGAC	20	7.0223754E-4	45.0	5
ATCCGGC	25	3.881764E-5	45.0	6
CGAGCGA	20	7.0223754E-4	45.0	24
CCGACCC	20	7.0223754E-4	45.0	36
ATGCGCT	20	7.0223754E-4	45.0	12
CGATGCG	45	3.8198777E-10	45.0	10
CGCCGGT	25	3.881764E-5	45.0	28
AATCGAC	20	7.0223754E-4	45.0	19
GTACGGG	25	3.881764E-5	45.0	3