##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2933319.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 244378 Sequences flagged as poor quality 0 Sequence length 51 %GC 38 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 28.40538428172749 31.0 27.0 31.0 16.0 33.0 2 28.65392138408531 31.0 28.0 33.0 16.0 34.0 3 28.852924567677942 31.0 30.0 33.0 16.0 34.0 4 31.89584987191973 35.0 30.0 37.0 19.0 37.0 5 33.56869276285099 35.0 33.0 37.0 28.0 37.0 6 32.52494905433386 35.0 33.0 37.0 17.0 37.0 7 31.84358248287489 35.0 30.0 35.0 25.0 37.0 8 32.791147320953606 35.0 32.0 35.0 27.0 37.0 9 32.66355400240611 34.0 31.0 37.0 25.0 39.0 10 30.987576623100278 35.0 27.0 38.0 15.0 39.0 11 32.02778073312655 35.0 27.0 39.0 16.0 39.0 12 32.8505757474077 35.0 31.0 39.0 23.0 39.0 13 33.108393554247925 35.0 31.0 39.0 23.0 39.0 14 33.08434883663832 36.0 31.0 39.0 17.0 41.0 15 33.782865069687126 36.0 31.0 39.0 23.0 41.0 16 34.0129553396787 36.0 32.0 40.0 25.0 41.0 17 31.94002324268142 34.0 27.0 39.0 18.0 41.0 18 32.76071904999632 35.0 30.0 39.0 21.0 39.0 19 32.67682442773081 36.0 30.0 37.0 19.0 39.0 20 32.48958989761763 34.0 30.0 37.0 24.0 39.0 21 32.7860159261472 35.0 31.0 37.0 24.0 39.0 22 33.251937572121875 35.0 31.0 38.0 25.0 39.0 23 34.20559543003053 35.0 33.0 38.0 27.0 40.0 24 32.48958171357487 35.0 31.0 37.0 22.0 39.0 25 31.430992151503 35.0 29.0 37.0 18.0 39.0 26 31.03472898542422 33.0 27.0 37.0 20.0 39.0 27 32.67031402172045 35.0 31.0 38.0 22.0 39.0 28 32.60252968761509 35.0 31.0 38.0 21.0 39.0 29 32.93312818666165 35.0 31.0 38.0 22.0 40.0 30 31.72905498858326 35.0 30.0 38.0 18.0 40.0 31 32.20003028095819 35.0 30.0 38.0 21.0 40.0 32 32.10757924199396 35.0 30.0 38.0 19.0 40.0 33 32.24869259917014 35.0 31.0 38.0 18.0 40.0 34 31.552938480550623 35.0 30.0 38.0 15.0 40.0 35 31.0671623468561 35.0 30.0 38.0 10.0 40.0 36 30.5679357388963 35.0 28.0 38.0 10.0 40.0 37 30.65964612199134 35.0 28.0 38.0 9.0 40.0 38 30.698700374010755 35.0 28.0 38.0 9.0 40.0 39 30.184627912496214 35.0 26.0 38.0 8.0 40.0 40 30.14621610783295 35.0 25.0 38.0 8.0 40.0 41 29.532339244940214 34.0 24.0 38.0 8.0 40.0 42 30.086079761680676 35.0 25.0 38.0 8.0 40.0 43 30.162743782173518 35.0 25.0 38.0 8.0 40.0 44 30.04862549001956 35.0 25.0 38.0 7.0 40.0 45 30.313825303423386 35.0 26.0 38.0 7.0 40.0 46 30.05113389912349 35.0 25.0 38.0 7.0 40.0 47 30.113013446382244 35.0 25.0 38.0 7.0 40.0 48 29.809860134709343 35.0 25.0 38.0 7.0 40.0 49 29.629528844658683 34.0 25.0 38.0 7.0 40.0 50 29.759962026041624 35.0 25.0 38.0 7.0 40.0 51 28.15202677818789 33.0 23.0 37.0 7.0 39.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 3.0 9 9.0 10 9.0 11 14.0 12 22.0 13 25.0 14 55.0 15 109.0 16 218.0 17 464.0 18 789.0 19 1282.0 20 1902.0 21 2699.0 22 3624.0 23 4983.0 24 6631.0 25 9193.0 26 11341.0 27 12295.0 28 12262.0 29 13053.0 30 14809.0 31 17572.0 32 20359.0 33 22880.0 34 26270.0 35 27414.0 36 20494.0 37 11202.0 38 2366.0 39 30.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 23.427640785995465 2.9376621463470522 38.136411624614325 35.49828544304315 2 35.37143278036484 12.445064613017538 37.74685118955061 14.436651417067004 3 13.279018569593006 12.429924133923675 59.900645720973245 14.39041157551007 4 12.19135928766092 2.82267634566123 67.74095867876814 17.245005687909714 5 19.87331101817676 3.5273224267323573 58.82076127965693 17.77860527543396 6 14.82703025640606 11.390141502099208 60.98175776870258 12.80107047279215 7 57.91192333188748 1.0426470467881725 38.1294551882739 2.915974433050438 8 59.01022186939905 8.194682009018814 29.265727684161426 3.5293684374207173 9 55.015181399307636 2.755976397220699 29.434318964882273 12.794523238589397 10 30.947548469993208 21.725769095417753 34.87998101302081 12.446701421568227 11 22.126377988198612 18.36376433230487 45.64608925517027 13.863768424326247 12 18.385861247739157 17.20081185704114 46.728838111450294 17.684488783769407 13 17.105876961101245 18.17143932759905 51.657268657571464 13.065415053728241 14 15.620882403489675 20.354532732078994 46.098666819435465 17.925918044995868 15 13.08014633068443 17.64766059137893 52.9998608712732 16.27233220666345 16 15.05168222998797 17.47702329996972 45.78644558839176 21.68484888165056 17 15.362266652480994 18.157117252780527 49.188552160996494 17.292063933741993 18 15.24523484110681 16.963883819329073 48.373421502753935 19.41745983681019 19 15.570959742693697 19.678940002782575 45.62112792477228 19.128972329751452 20 17.79742857376687 19.61796888426945 49.34527657972485 13.239325962238826 21 18.387907258427518 22.396042196924437 44.649682049939024 14.566368494709018 22 16.084508425472013 17.089099673456694 47.586116589873065 19.240275311198225 23 15.469477612551048 22.595732840108358 46.01682639190107 15.917963155439525 24 15.956428156380689 18.768056044324776 45.798312450384245 19.477203348910294 25 14.758284297277168 23.489839510921605 43.46463265924101 18.28724353256021 26 14.527085089492509 19.90522878491517 46.54715236232394 19.02053376326838 27 15.513671443419621 21.075137696519327 44.507688908166855 18.903501951894196 28 13.089557979850886 20.827570403227785 48.66272741408801 17.420144202833317 29 16.981479511248967 18.04254065423238 44.73275008388644 20.243229750632217 30 15.348353779800144 22.733224758366138 46.268894908707004 15.649526553126714 31 17.900547512460204 18.84171242910573 44.795358010950245 18.462382047483818 32 20.172028578677295 21.94714745189829 42.28203848136903 15.59878548805539 33 18.645704605160855 19.66789154506543 41.010647439622225 20.675756410151486 34 17.721316976159883 21.419276694301452 42.1817839576394 18.67762237189927 35 16.7474158885006 23.990702927432093 40.40052705235332 18.861354131713984 36 19.24109371547357 21.916866493710565 39.09026180752768 19.751777983288186 37 19.495208242967863 24.104051919567226 39.8534237942859 16.54731604317901 38 21.35707796937531 22.34857474895449 38.542340145184916 17.752007136485283 39 21.796970267372675 22.141927669430146 38.65364312663169 17.407458936565483 40 20.590233163378045 22.682892895432484 39.136501649084614 17.590372292104853 41 19.889269901545966 23.49884195795039 38.26449189370565 18.34739624679799 42 18.7005376916089 22.04576516707723 40.726251953940206 18.527445187373658 43 22.094460221460196 21.377538076258908 35.18360899917341 21.34439270310748 44 20.251822995523327 23.132196842596304 36.434539934036614 20.18144022784375 45 18.22422640335873 21.38735892756304 37.85569895817136 22.532715710906874 46 22.672253639853015 24.08195500413294 34.45031876846525 18.795472587548797 47 18.01962533452275 21.529761271472882 41.38793181055578 19.062681583448594 48 19.499709466482255 22.859668218906776 36.49632945682508 21.14429285778589 49 18.063000761115976 21.096007005540596 40.26262593195787 20.578366301385557 50 20.73263550728789 20.39790815867222 37.3339662326396 21.53549010140029 51 19.103601797215788 21.155341315503033 35.954545826547395 23.78651106073378 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 46.0 1 184.0 2 322.0 3 9150.5 4 17979.0 5 12040.5 6 6102.0 7 5722.0 8 5342.0 9 5401.0 10 5460.0 11 5197.0 12 4934.0 13 4728.5 14 4523.0 15 4187.5 16 3852.0 17 3594.5 18 3337.0 19 3049.0 20 2761.0 21 2605.0 22 2449.0 23 2369.5 24 2290.0 25 2317.0 26 2567.5 27 2791.0 28 3078.5 29 3366.0 30 3689.0 31 4012.0 32 4420.0 33 4828.0 34 5304.5 35 5781.0 36 6353.5 37 6926.0 38 7459.0 39 7992.0 40 8504.5 41 9017.0 42 9688.5 43 10360.0 44 11407.0 45 12454.0 46 20673.0 47 28892.0 48 24173.0 49 19454.0 50 18013.0 51 16572.0 52 14250.0 53 11928.0 54 10697.5 55 9467.0 56 8619.5 57 7772.0 58 7008.5 59 6245.0 60 5289.5 61 4334.0 62 3876.0 63 3418.0 64 2819.0 65 2220.0 66 1808.5 67 1397.0 68 1187.0 69 977.0 70 851.0 71 725.0 72 612.0 73 499.0 74 488.0 75 407.0 76 337.0 77 284.5 78 232.0 79 169.0 80 106.0 81 73.5 82 41.0 83 27.5 84 14.0 85 8.0 86 2.0 87 1.5 88 1.0 89 0.5 90 0.0 91 0.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 244378.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 43.76228502124398 #Duplication Level Percentage of deduplicated Percentage of total 1 78.32895004973815 34.27853837491424 2 7.609499679293324 6.660181876685983 3 3.4802821499228296 4.569152981978119 4 2.2088847101698 3.866633690620748 5 1.6119176986380028 3.5270600879291965 6 1.239532684852409 3.2546869588595353 7 0.9750472294160083 2.9869206334014335 8 0.7944074891300892 2.7812069569857396 9 0.6706553694364263 2.641447028547411 >10 3.00297901687054 19.564089498281124 >50 0.03991996027303629 1.183584830364875 >100 0.028941971197951305 2.3313563927998904 >500 0.002993997020477722 1.0053919850553295 >1k 0.0049899950341295365 5.829701223509356 >5k 0.0 0.0 >10k+ 9.97999006825907E-4 5.520047480067032 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 12639 5.171905818035993 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCCATGGTTGTCGTATGCCG 4673 1.9122015893411028 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCCATGGTTGTCGTATGC 3708 1.5173215264876543 No Hit GAATCTGTCTCTTATACACATCTGACGCCATGGTTGTCGTATGCCGTCTTC 2915 1.1928242313137845 No Hit GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCCATGGTTGT 1039 0.4251610210411739 No Hit GCTGTCTCTTATACACATCTGACGCCATGGTTGTCGTATGCCGTCTTCTGC 1013 0.4145217654617028 TruSeq Adapter, Index 22 (95% over 22bp) GAACTGTCTCTTATACACATCTGACGCCATGGTTGTCGTATGCCGTCTTCT 972 0.3977444778171521 No Hit GAATGATCTGTCTCTTATACACATCTGACGCCATGGTTGTCGTATGCCGTC 715 0.29257952843545654 No Hit GAATGATACGGCGACTGTCTCTTATACACATCTGACGCCATGGTTGTCGTA 615 0.2516593146682598 No Hit GAATGACTGTCTCTTATACACATCTGACGCCATGGTTGTCGTATGCCGTCT 477 0.19518941966952835 No Hit GAATGATACCTGTCTCTTCTACACATCTGACGCCATGGTTGTCGTATGCCG 431 0.17636612133661786 No Hit CTGTCTCTTATACACATCTGACGCCATGGTTGTCGTATGCCGTCTTCTGCT 284 0.11621340709883868 TruSeq Adapter, Index 23 (95% over 22bp) GAATCTTTCTCTTATACACATCTGACGCCATGGTTGTCGTATGCCGTCTTC 266 0.10884776862074327 No Hit GAATGATACGGCGACCTGTCTCTTATACACATCTGACGCCATGGTTGTCGT 255 0.10434654510635163 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 4.092021376719672E-4 0.0 0.0 0.14485755673587639 0.0 2 4.092021376719672E-4 0.0 0.0 0.8114478390035109 0.0 3 4.092021376719672E-4 0.0 0.0 0.9874047582024569 0.0 4 4.092021376719672E-4 0.0 0.0 1.708009722642791 0.0 5 4.092021376719672E-4 0.0 0.0 3.3648691780765865 0.0 6 4.092021376719672E-4 0.0 0.0 3.676681206982625 0.0 7 4.092021376719672E-4 0.0 0.0 4.089156961755968 0.0 8 4.092021376719672E-4 0.0 0.0 4.662858358772066 0.0 9 4.092021376719672E-4 0.0 0.0 4.839633682246356 0.0 10 4.092021376719672E-4 0.0 0.0 7.402466670485887 0.0 11 4.092021376719672E-4 0.0 0.0 8.036729983877436 0.0 12 4.092021376719672E-4 0.0 0.0 10.304119028717807 0.0 13 4.092021376719672E-4 0.0 0.0 10.597107759290935 0.0 14 4.092021376719672E-4 0.0 0.0 10.764062231461097 0.0 15 4.092021376719672E-4 0.0 0.0 11.246511551776347 0.0 16 4.092021376719672E-4 0.0 0.0 11.567326027711168 0.0 17 4.092021376719672E-4 0.0 0.0 11.888958907921335 0.0 18 4.092021376719672E-4 0.0 0.0 12.187676468421872 0.0 19 4.092021376719672E-4 0.0 0.0 12.998305903150039 0.0 20 4.092021376719672E-4 0.0 0.0 13.29415904868687 0.0 21 4.092021376719672E-4 0.0 0.0 13.635024429367618 0.0 22 4.092021376719672E-4 0.0 0.0 14.094558429973238 0.0 23 4.092021376719672E-4 0.0 0.0 14.468978385943089 0.0 24 4.092021376719672E-4 0.0 0.0 14.75828429727717 0.0 25 4.092021376719672E-4 0.0 0.0 15.012808026909132 0.0 26 4.092021376719672E-4 0.0 0.0 15.219864308571148 0.0 27 4.092021376719672E-4 0.0 0.0 15.433467824435915 0.0 28 4.092021376719672E-4 0.0 0.0 15.618017988525972 0.0 29 4.092021376719672E-4 0.0 0.0 15.827938685151691 0.0 30 4.092021376719672E-4 0.0 0.0 16.094329276776143 0.0 31 4.092021376719672E-4 0.0 0.0 16.315298431119004 0.0 32 4.092021376719672E-4 0.0 0.0 16.541587213251603 0.0 33 4.092021376719672E-4 0.0 0.0 16.773195623173937 0.0 34 4.092021376719672E-4 0.0 0.0 17.00275802240791 0.0 35 4.092021376719672E-4 0.0 0.0 17.275286646097438 0.0 36 4.092021376719672E-4 0.0 0.0 17.503621438918398 0.0 37 4.092021376719672E-4 0.0 0.0 17.7327746360147 0.0 38 4.092021376719672E-4 0.0 0.0 17.990571982748037 0.0 39 4.092021376719672E-4 0.0 0.0 18.281514702632805 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CAGCGCT 30 2.1584638E-6 45.000004 26 AGCGCTC 30 2.1584638E-6 45.000004 27 GAAATCG 20 7.0223754E-4 45.0 17 GGTACCA 20 7.0223754E-4 45.0 8 ACCGGGA 20 7.0223754E-4 45.0 4 TTGTGCG 35 1.2066812E-7 45.0 1 CACGGGA 50 2.1827873E-11 45.0 4 GGGTACC 40 6.7775545E-9 45.0 7 TACGGGA 20 7.0223754E-4 45.0 4 TGCGGAT 20 7.0223754E-4 45.0 4 CCGCTGA 20 7.0223754E-4 45.0 18 ACGGGAC 20 7.0223754E-4 45.0 5 ATCCGGC 25 3.881764E-5 45.0 6 CGAGCGA 20 7.0223754E-4 45.0 24 CCGACCC 20 7.0223754E-4 45.0 36 ATGCGCT 20 7.0223754E-4 45.0 12 CGATGCG 45 3.8198777E-10 45.0 10 CGCCGGT 25 3.881764E-5 45.0 28 AATCGAC 20 7.0223754E-4 45.0 19 GTACGGG 25 3.881764E-5 45.0 3 >>END_MODULE