SRR2933318.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2933318.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	264132
Sequences flagged as poor quality	0
Sequence length	51
%GC	37

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	8557	3.2396680447654957	No Hit
GAATCTGTCTCTTATACACATCTGACGCTCAACCGATCGTATGCCGTCTTC	7708	2.918237850771584	No Hit
GAATGATACCTGTCTCTTATACACATCTGACGCTCAACCGATCGTATGCCG	6000	2.271591476988778	No Hit
GAATGATACGGCTGTCTCTTATACACATCTGACGCTCAACCGATCGTATGC	5077	1.9221449881120047	No Hit
GAACTGTCTCTTATACACATCTGACGCTCAACCGATCGTATGCCGTCTTCT	2006	0.7594687504732482	No Hit
GAATGATCTGTCTCTTATACACATCTGACGCTCAACCGATCGTATGCCGTC	1408	0.5330667999333667	No Hit
GCTGTCTCTTATACACATCTGACGCTCAACCGATCGTATGCCGTCTTCTGC	1170	0.4429603380128118	No Hit
GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCTCAACCGAT	1036	0.3922281283600624	No Hit
GAATGACTGTCTCTTATACACATCTGACGCTCAACCGATCGTATGCCGTCT	979	0.370648009328669	No Hit
GAATGATACGGCGACTGTCTCTTATACACATCTGACGCTCAACCGATCGTA	951	0.36004724910272135	No Hit
GAATGCTGTCTCTTATACACATCTGACGCTCAACCGATCGTATGCCGTCTT	754	0.2854633289415898	No Hit
GAATGATACGGCGACCTGTCTCTTATACACATCTGACGCTCAACCGATCGT	484	0.18324171247709478	No Hit
CTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	274	0.10373601078248755	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
ACACGAC	50	2.1827873E-11	45.0	26
CCGATGA	225	0.0	45.0	18
ATGCTAC	25	3.8826212E-5	45.0	3
TACGGTG	40	6.7811925E-9	45.0	7
CGCGACC	25	3.8826212E-5	45.0	10
AGGCACG	40	6.7811925E-9	45.0	10
CTGTTCG	20	7.02341E-4	45.0	1
GATGATC	20	7.02341E-4	45.0	9
ATACGGT	40	6.7811925E-9	45.0	6
TTCTTCG	30	2.1591313E-6	44.999996	1
GTATGAT	30	2.1591313E-6	44.999996	1
CGTTTTT	7265	0.0	44.4735	1
CGATGAA	230	0.0	44.02174	19
GATGAAT	240	0.0	43.124996	20
GCGACTG	95	0.0	42.63158	11
GATACCT	750	0.0	42.600002	5
TCTGGGT	85	0.0	42.35294	4
ACGGCTG	745	0.0	42.28188	8
TGATCTG	210	0.0	41.785713	4
CGGCTGT	765	0.0	41.764706	9