SRR2933317.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2933317.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	186764
Sequences flagged as poor quality	0
Sequence length	51
%GC	36

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	12222	6.544087725685892	No Hit
GAATGATACCTGTCTCTTATACACATCTGACGCTCAACCGATCGTATGCCG	2451	1.3123514167612602	No Hit
GAATCTGTCTCTTATACACATCTGACGCTCAACCGATCGTATGCCGTCTTC	2111	1.1303034846115954	No Hit
GAATGATACGGCTGTCTCTTATACACATCTGACGCTCAACCGATCGTATGC	1774	0.9498618577456039	No Hit
GAACTGTCTCTTATACACATCTGACGCTCAACCGATCGTATGCCGTCTTCT	711	0.38069435223062265	No Hit
GCTGTCTCTTATACACATCTGACGCTCAACCGATCGTATGCCGTCTTCTGC	432	0.2313079608489859	No Hit
GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCTCAACCGAT	422	0.22595360990340752	No Hit
GAATGATCTGTCTCTTATACACATCTGACGCTCAACCGATCGTATGCCGTC	415	0.22220556424150262	No Hit
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTA	283	0.15152813175986807	No Hit
GAATGCTGTCTCTTATACACATCTGACGCTCAACCGATCGTATGCCGTCTT	252	0.1349296438285751	No Hit
GAATGATACGGCGACTGTCTCTTATACACATCTGACGCTCAACCGATCGTA	236	0.1263626823156497	No Hit
GAATGACTGTCTCTTATACACATCTGACGCTCAACCGATCGTATGCCGTCT	232	0.12422094193741834	No Hit
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAAA	207	0.1108350645734724	No Hit
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTCTT	196	0.10494527853333618	No Hit
GAATGATACCTGTCTCTTCTACACATCTGACGCTCAACCGATCGTATGCCG	194	0.1038744083442205	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TGATCCG	35	1.2046257E-7	45.000004	4
ATGATCC	35	1.2046257E-7	45.000004	3
CTCGTAA	20	7.0181023E-4	45.000004	33
AACTTAA	30	2.1557116E-6	45.000004	45
GAGAGTC	20	7.0181023E-4	45.000004	9
TACGGCC	20	7.0181023E-4	45.000004	7
CTTATCC	35	1.2046257E-7	45.000004	11
GCGATCT	20	7.0181023E-4	45.000004	9
TCGTAAC	20	7.0181023E-4	45.000004	34
CGTAACC	20	7.0181023E-4	45.000004	35
GGGCAAC	20	7.0181023E-4	45.000004	7
CACCGGT	55	1.8189894E-12	45.000004	16
TTACACG	75	0.0	45.000004	34
GTAACCA	20	7.0181023E-4	45.000004	36
TTCTTCG	25	3.878225E-5	45.0	1
TGATTGG	25	3.878225E-5	45.0	2
GGATTGT	50	2.1827873E-11	45.0	8
CGTTTTT	5935	0.0	44.545074	1
TACGGCT	260	0.0	42.40385	7
TGCGGGC	85	0.0	42.35294	4