##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2933317.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 186764 Sequences flagged as poor quality 0 Sequence length 51 %GC 36 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 28.746241245636202 31.0 28.0 31.0 16.0 33.0 2 29.114053029491764 31.0 30.0 33.0 16.0 34.0 3 29.276193484825768 31.0 30.0 33.0 16.0 34.0 4 32.269414876528664 35.0 32.0 37.0 19.0 37.0 5 33.68160887537213 35.0 33.0 37.0 28.0 37.0 6 33.057687777087665 35.0 33.0 37.0 25.0 37.0 7 32.141831402197425 35.0 31.0 35.0 25.0 37.0 8 33.210950718553896 35.0 33.0 36.0 28.0 37.0 9 32.99367651153327 35.0 31.0 37.0 25.0 39.0 10 31.49902015377696 35.0 27.0 39.0 15.0 39.0 11 32.35663725343214 35.0 29.0 39.0 15.0 39.0 12 33.17065922768842 35.0 31.0 39.0 23.0 39.0 13 33.32322610353173 35.0 32.0 39.0 23.0 39.0 14 33.63346255166949 37.0 31.0 40.0 20.0 41.0 15 34.241791780000426 37.0 32.0 40.0 25.0 41.0 16 34.41104281339016 37.0 32.0 40.0 25.0 41.0 17 32.47027799790109 36.0 27.0 40.0 18.0 41.0 18 33.077745175729795 36.0 30.0 39.0 23.0 39.0 19 32.814926859566086 36.0 30.0 37.0 21.0 39.0 20 32.42411278404832 34.0 30.0 36.0 24.0 39.0 21 32.71308175023024 35.0 31.0 37.0 24.0 39.0 22 32.88308239275235 34.0 30.0 37.0 25.0 39.0 23 33.945637274849545 35.0 33.0 38.0 27.0 40.0 24 32.12373905035231 34.0 31.0 37.0 21.0 39.0 25 31.293959221263197 34.0 29.0 37.0 18.0 39.0 26 30.495100768884797 33.0 25.0 37.0 18.0 39.0 27 32.316683086676235 34.0 30.0 37.0 22.0 39.0 28 32.370531794135914 35.0 31.0 37.0 21.0 39.0 29 32.57454862821529 35.0 31.0 38.0 22.0 40.0 30 31.555781628151035 35.0 30.0 37.0 18.0 40.0 31 31.83674048531837 35.0 30.0 37.0 21.0 40.0 32 31.636659099183998 35.0 30.0 37.0 18.0 40.0 33 31.43140005568525 35.0 30.0 38.0 15.0 40.0 34 30.474802424450107 35.0 27.0 38.0 12.0 40.0 35 29.77578119980296 34.0 24.0 38.0 8.0 40.0 36 28.84165577948641 34.0 22.0 38.0 7.0 40.0 37 28.89009659249106 34.0 21.0 38.0 7.0 40.0 38 28.74338737658221 34.0 21.0 38.0 7.0 40.0 39 28.334502366623116 33.0 20.0 37.0 7.0 40.0 40 28.1545158595875 33.0 20.0 37.0 7.0 40.0 41 27.789922040650232 33.0 18.0 37.0 7.0 40.0 42 28.146141654708615 33.0 20.0 37.0 7.0 40.0 43 28.133992632413097 33.0 19.0 37.0 7.0 40.0 44 27.983208755434667 33.0 18.0 38.0 7.0 40.0 45 28.092373262513117 34.0 20.0 38.0 7.0 40.0 46 27.81291897796149 33.0 18.0 38.0 7.0 40.0 47 27.756291362361054 33.0 18.0 38.0 7.0 40.0 48 27.570104516930456 33.0 18.0 37.0 7.0 40.0 49 27.33169133237669 33.0 18.0 37.0 7.0 39.0 50 27.523725129039857 33.0 18.0 37.0 7.0 39.0 51 25.937247006917822 31.0 15.0 35.0 7.0 38.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 2.0 9 4.0 10 9.0 11 15.0 12 23.0 13 26.0 14 49.0 15 89.0 16 188.0 17 357.0 18 630.0 19 1131.0 20 1679.0 21 2441.0 22 3494.0 23 4664.0 24 6378.0 25 8804.0 26 11207.0 27 11826.0 28 11234.0 29 10728.0 30 11621.0 31 12755.0 32 14278.0 33 15789.0 34 17424.0 35 18299.0 36 13178.0 37 7007.0 38 1396.0 39 39.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 20.55749502045362 2.474245571951768 34.23090103017712 42.737358377417486 2 43.03934377074811 9.74384785076353 34.169325994302966 13.047482384185388 3 12.19078623289285 9.623374954488018 64.83476472981945 13.351074082799682 4 10.869332419524106 2.7901522777408925 70.38401404981688 15.95650125291812 5 16.311494720609968 3.1692403246878413 64.6296930886038 15.889571866098393 6 13.531515709665673 8.430960998907713 66.70129146944808 11.33623182197854 7 52.23490608468442 1.203658092566019 43.95868582810392 2.602749994645649 8 53.597052965239556 5.7644942280096805 37.61699256816089 3.0214602385898783 9 49.77993617613673 2.375725514553126 37.5291812126534 10.315157096656744 10 28.215287742819818 16.663275577734467 43.304919577648796 11.816517101796919 11 20.996016362896487 15.724122421880018 50.08352787475102 13.196333340472469 12 17.327215094986187 14.433188408901074 52.85493992418239 15.38465657193035 13 16.1053522092052 14.979867640444624 56.821443104666855 12.093337045683322 14 14.121565183868412 16.54119637617528 53.471761153113015 15.865477286843287 15 12.367479814096935 15.217600822428306 57.88321089717504 14.531708466299714 16 14.863142789831016 15.417853547792937 51.27219378466942 18.446809877706624 17 14.916150864192243 15.642200852412671 53.481934419909614 15.959713863485469 18 15.145317084662995 15.008781135550747 52.95720802724294 16.888693752543315 19 15.009852005739866 17.84819344199096 50.013385877363945 17.128568674905228 20 16.4367865327365 17.876036066907968 53.01128697179328 12.67589042856225 21 16.55833029920113 18.902465143175345 51.109421515923835 13.429783041699686 22 15.20635668544259 14.878134972478636 52.60382086483476 17.311687477244007 23 15.185474716754834 18.981174102075347 51.67323467049324 14.160116510676577 24 15.537255573879335 16.899402454434473 50.95575164378574 16.60759032790045 25 14.676811376924888 20.056863207042042 48.99177571694759 16.274549699085476 26 14.21098284465957 16.736094750594333 51.653959007089156 17.398963397656935 27 14.935426527596324 17.10875757640659 50.2184575185796 17.73735837741749 28 12.7920798440813 17.944036323916816 52.439977725900064 16.82390610610182 29 15.298451521706538 16.475873294639225 51.38838320018847 16.837291983465764 30 14.49369257458611 18.074147051894368 50.65644342592791 16.77571694759161 31 16.05823392088411 18.805551391060376 48.17148915208499 16.96472553597053 32 17.161765650767812 20.471825405324367 47.079201559187 15.287207384720825 33 15.53297209312287 18.47304619733996 44.93210683001006 21.061874879527103 34 16.59848793129297 20.19875350709987 45.8257480028271 17.377010558780064 35 16.53048767428412 21.85806686513461 42.11357649225761 19.497868968323658 36 16.421258914994326 24.34837548992311 41.512282881069154 17.71808271401341 37 16.471054378788203 24.200595403825147 41.32488059797391 18.003469619412733 38 18.06879270094879 23.264654858538048 39.8379773403868 18.82857510012636 39 18.06932813604335 22.411706752907413 40.10141140690926 19.417553704139983 40 20.080422351202586 20.829496048489002 40.826390524940564 18.263691075367845 41 17.3588057655651 23.890578484076162 39.73517380223169 19.015441948127048 42 18.317770019918186 21.789531173031204 42.27152984515217 17.62116896189844 43 18.34882525540254 21.956051487438693 40.701634147908585 18.993489109250177 44 18.954937782442013 21.943736480263862 38.6391381636718 20.462187573622327 45 17.423593412006596 22.648904499796537 38.042128033239806 21.885374054957058 46 18.963504743954935 24.360155062003383 36.22325501702684 20.45308517701484 47 15.6100747467392 22.435265897067957 40.96774538990384 20.986913966289006 48 17.559593926024284 23.708530551926497 36.05512839733567 22.676747124713543 49 17.1746160930372 22.056713285215565 38.785847379580645 21.982823242166585 50 16.884945706881414 21.538947548778136 38.93576920605684 22.64033753828361 51 17.145702597931077 20.8942836949305 37.92433231243709 24.03568139470133 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 24.0 1 170.5 2 317.0 3 9053.0 4 17789.0 5 12357.5 6 6926.0 7 6906.0 8 6886.0 9 6702.5 10 6519.0 11 5949.5 12 5380.0 13 4735.0 14 4090.0 15 3694.0 16 3298.0 17 3021.0 18 2744.0 19 2547.5 20 2351.0 21 2217.5 22 2084.0 23 1965.5 24 1847.0 25 1855.5 26 1895.5 27 1927.0 28 2080.0 29 2233.0 30 2514.0 31 2795.0 32 3065.0 33 3335.0 34 3533.0 35 3731.0 36 4010.0 37 4289.0 38 4616.5 39 4944.0 40 5217.5 41 5491.0 42 5774.5 43 6058.0 44 6697.0 45 7336.0 46 11867.0 47 16398.0 48 14011.0 49 11624.0 50 10989.5 51 10355.0 52 9144.5 53 7934.0 54 7562.5 55 7191.0 56 6750.0 57 6309.0 58 5923.5 59 5538.0 60 5123.5 61 4709.0 62 4200.5 63 3692.0 64 3183.5 65 2675.0 66 2300.5 67 1926.0 68 1681.0 69 1436.0 70 1216.0 71 996.0 72 810.0 73 624.0 74 547.0 75 373.5 76 277.0 77 245.5 78 214.0 79 147.0 80 80.0 81 53.5 82 27.0 83 21.0 84 15.0 85 12.5 86 10.0 87 6.0 88 2.0 89 2.5 90 3.0 91 1.5 92 0.0 93 0.0 94 0.0 95 0.5 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 186764.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 55.64485397155092 #Duplication Level Percentage of deduplicated Percentage of total 1 79.50274101593216 44.23918414169577 2 10.115269628375845 11.25725402707676 3 4.36726688286688 7.290477838557538 4 2.4017311016945 5.3457590573089036 5 1.2523054367943234 3.4842176579099706 6 0.778566691375538 2.599393790922322 7 0.426762427088092 1.6622993055103068 8 0.26685144465916305 1.1879127736125226 9 0.15391431628057364 0.7708085688207259 >10 0.653636122348531 6.8471826109441745 >50 0.05197106783195435 1.9498231184178583 >100 0.023986646691671238 2.6494459030640836 >500 9.994436121529683E-4 0.39541478528097473 >1k 0.0029983308364589048 3.52369631440261 >5k 0.0 0.0 >10k+ 9.994436121529683E-4 6.797130106475489 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 12222 6.544087725685892 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCTCAACCGATCGTATGCCG 2451 1.3123514167612602 No Hit GAATCTGTCTCTTATACACATCTGACGCTCAACCGATCGTATGCCGTCTTC 2111 1.1303034846115954 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCTCAACCGATCGTATGC 1774 0.9498618577456039 No Hit GAACTGTCTCTTATACACATCTGACGCTCAACCGATCGTATGCCGTCTTCT 711 0.38069435223062265 No Hit GCTGTCTCTTATACACATCTGACGCTCAACCGATCGTATGCCGTCTTCTGC 432 0.2313079608489859 No Hit GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCTCAACCGAT 422 0.22595360990340752 No Hit GAATGATCTGTCTCTTATACACATCTGACGCTCAACCGATCGTATGCCGTC 415 0.22220556424150262 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTA 283 0.15152813175986807 No Hit GAATGCTGTCTCTTATACACATCTGACGCTCAACCGATCGTATGCCGTCTT 252 0.1349296438285751 No Hit GAATGATACGGCGACTGTCTCTTATACACATCTGACGCTCAACCGATCGTA 236 0.1263626823156497 No Hit GAATGACTGTCTCTTATACACATCTGACGCTCAACCGATCGTATGCCGTCT 232 0.12422094193741834 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAAA 207 0.1108350645734724 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTCTT 196 0.10494527853333618 No Hit GAATGATACCTGTCTCTTCTACACATCTGACGCTCAACCGATCGTATGCCG 194 0.1038744083442205 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.07121286757619241 0.0 2 0.0 0.0 0.0 0.4358441669700799 0.0 3 0.0 0.0 0.0 0.5814825126898118 0.0 4 0.0 0.0 0.0 1.2400676789959522 0.0 5 0.0 0.0 0.0 2.7864042320789872 0.0 6 0.0 0.0 0.0 3.2243901394272987 0.0 7 0.0 0.0 0.0 3.6173994988327514 0.0 8 0.0 0.0 0.0 4.13034631941916 0.0 9 0.0 0.0 0.0 4.384142554239575 0.0 10 0.0 0.0 0.0 6.390417853547793 0.0 11 0.0 0.0 0.0 6.856246385813112 0.0 12 0.0 0.0 0.0 8.299779400741043 0.0 13 0.0 0.0 0.0 8.52037865969887 0.0 14 0.0 0.0 0.0 8.660127219378467 0.0 15 0.0 0.0 0.0 8.979781970829496 0.0 16 0.0 0.0 0.0 9.191278833179842 0.0 17 0.0 0.0 0.0 9.369578719667603 0.0 18 0.0 0.0 0.0 9.53609903407509 0.0 19 0.0 0.0 0.0 9.97140776595061 0.0 20 0.0 0.0 0.0 10.139534385641772 0.0 21 0.0 0.0 0.0 10.3258657985479 0.0 22 0.0 0.0 0.0 10.599473131866954 0.0 23 0.0 0.0 0.0 10.808828253839069 0.0 24 0.0 0.0 0.0 10.965175301449959 0.0 25 0.0 0.0 0.0 11.119380608682615 0.0 26 0.0 0.0 0.0 11.248420466471055 0.0 27 0.0 0.0 0.0 11.412263605405753 0.0 28 0.0 0.0 0.0 11.557901951125485 0.0 29 0.0 0.0 0.0 11.70514660212889 0.0 30 0.0 0.0 0.0 11.89790323616971 0.0 31 0.0 0.0 0.0 12.03711636075475 0.0 32 0.0 0.0 0.0 12.189179927609175 0.0 33 0.0 0.0 0.0 12.354093936732989 0.0 34 0.0 0.0 0.0 12.535070998693538 0.0 35 0.0 0.0 0.0 12.738536334625516 0.0 36 0.0 0.0 0.0 12.920584266775181 0.0 37 0.0 0.0 0.0 13.102632198924846 0.0 38 0.0 0.0 0.0 13.313058191086077 0.0 39 0.0 0.0 0.0 13.657342956886767 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TGATCCG 35 1.2046257E-7 45.000004 4 ATGATCC 35 1.2046257E-7 45.000004 3 CTCGTAA 20 7.0181023E-4 45.000004 33 AACTTAA 30 2.1557116E-6 45.000004 45 GAGAGTC 20 7.0181023E-4 45.000004 9 TACGGCC 20 7.0181023E-4 45.000004 7 CTTATCC 35 1.2046257E-7 45.000004 11 GCGATCT 20 7.0181023E-4 45.000004 9 TCGTAAC 20 7.0181023E-4 45.000004 34 CGTAACC 20 7.0181023E-4 45.000004 35 GGGCAAC 20 7.0181023E-4 45.000004 7 CACCGGT 55 1.8189894E-12 45.000004 16 TTACACG 75 0.0 45.000004 34 GTAACCA 20 7.0181023E-4 45.000004 36 TTCTTCG 25 3.878225E-5 45.0 1 TGATTGG 25 3.878225E-5 45.0 2 GGATTGT 50 2.1827873E-11 45.0 8 CGTTTTT 5935 0.0 44.545074 1 TACGGCT 260 0.0 42.40385 7 TGCGGGC 85 0.0 42.35294 4 >>END_MODULE