##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2933316.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 799629 Sequences flagged as poor quality 0 Sequence length 51 %GC 37 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 29.45467085360836 31.0 28.0 33.0 25.0 34.0 2 28.732318362640676 31.0 28.0 33.0 16.0 34.0 3 28.751554783530864 31.0 28.0 34.0 16.0 34.0 4 33.17842149296737 35.0 32.0 37.0 28.0 37.0 5 34.24389560658756 35.0 33.0 37.0 30.0 37.0 6 33.707974573208325 35.0 33.0 37.0 28.0 37.0 7 33.59530107087161 35.0 32.0 37.0 29.0 37.0 8 33.59692307307514 35.0 33.0 37.0 28.0 37.0 9 34.692073449062 37.0 34.0 39.0 28.0 39.0 10 34.44547784034846 37.0 32.0 39.0 27.0 39.0 11 34.892496395203274 37.0 34.0 39.0 27.0 39.0 12 35.03953833590327 37.0 34.0 39.0 27.0 39.0 13 35.334582662709835 37.0 34.0 39.0 30.0 39.0 14 36.07422317099555 38.0 34.0 40.0 29.0 41.0 15 36.46492310809138 38.0 34.0 40.0 30.0 41.0 16 36.295660862725086 38.0 34.0 40.0 30.0 41.0 17 35.599700611158426 38.0 33.0 40.0 27.0 41.0 18 35.35862006005285 37.0 33.0 39.0 27.0 40.0 19 34.71026938742842 37.0 33.0 38.0 27.0 40.0 20 34.067112373363145 35.0 33.0 38.0 27.0 40.0 21 34.38765852664173 35.0 33.0 38.0 27.0 40.0 22 34.870855109056826 35.0 33.0 39.0 29.0 40.0 23 35.1728864260801 35.0 34.0 39.0 30.0 40.0 24 34.60045596145212 35.0 33.0 39.0 27.0 40.0 25 33.55415699030426 35.0 33.0 38.0 24.0 40.0 26 33.59502344212128 35.0 32.0 38.0 24.0 40.0 27 34.38746093500861 35.0 33.0 39.0 27.0 40.0 28 34.11809726760785 35.0 33.0 39.0 25.0 40.0 29 34.14512104988688 35.0 33.0 39.0 24.0 40.0 30 33.34372315161156 35.0 33.0 39.0 21.0 40.0 31 33.22869480721685 35.0 33.0 39.0 21.0 40.0 32 32.573896144336935 35.0 31.0 39.0 16.0 40.0 33 31.808781322338234 35.0 30.0 39.0 12.0 40.0 34 31.198759674799188 36.0 28.0 40.0 8.0 40.0 35 30.64354594443173 36.0 24.0 40.0 7.0 41.0 36 30.0920189237759 35.0 22.0 40.0 7.0 41.0 37 30.056915144398214 36.0 21.0 40.0 7.0 41.0 38 29.789915073115157 35.0 21.0 39.0 7.0 40.0 39 29.49783712196531 35.0 20.0 39.0 7.0 40.0 40 29.24675443236801 35.0 20.0 39.0 7.0 40.0 41 29.010030901830724 35.0 18.0 39.0 7.0 40.0 42 29.151001276842134 35.0 18.0 39.0 7.0 40.0 43 29.098829582218755 35.0 18.0 39.0 7.0 40.0 44 29.175238766978186 35.0 18.0 39.0 7.0 40.0 45 29.308865736485295 35.0 20.0 39.0 7.0 40.0 46 29.069208345370164 35.0 18.0 39.0 7.0 40.0 47 29.009963370513077 35.0 18.0 39.0 7.0 40.0 48 28.83928922037595 35.0 18.0 39.0 7.0 40.0 49 28.954305058971098 35.0 18.0 39.0 7.0 40.0 50 28.928106659463324 35.0 18.0 39.0 7.0 40.0 51 27.921606144849672 34.0 18.0 38.0 7.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 3.0 8 11.0 9 31.0 10 33.0 11 69.0 12 89.0 13 138.0 14 174.0 15 238.0 16 440.0 17 986.0 18 1813.0 19 3416.0 20 5516.0 21 8080.0 22 11878.0 23 17637.0 24 25261.0 25 36241.0 26 44717.0 27 41281.0 28 34775.0 29 30346.0 30 30769.0 31 34350.0 32 41132.0 33 49736.0 34 59200.0 35 70813.0 36 82571.0 37 88925.0 38 69185.0 39 9775.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 24.7547300060403 2.6010812514303505 34.56202814055018 38.08216060197917 2 38.346783320765006 14.611025863244079 33.01305980648526 14.029131009505658 3 11.361393846396266 14.706945345904163 59.20808274837456 14.723578059325012 4 10.107437324059031 2.6944995741775246 70.73342762706206 16.464635474701392 5 18.949662906172737 3.408580729313219 60.75204876261366 16.88970760190038 6 12.99615196547399 12.807064276058021 64.1862663810342 10.010517377433786 7 53.354493146196546 1.1591625616379597 43.018574864093225 2.4677694280722684 8 53.126262304143545 8.792202383855512 35.178188885095466 2.903346426905477 9 49.98880730938973 2.555560141015396 34.23775275784145 13.217879791753425 10 28.086275010035905 13.837292044185489 43.86909429247814 14.20733865330047 11 21.802986134820024 17.271134488619097 46.001583234224874 14.924296142336008 12 15.43503299655215 14.907413312923868 51.70472806764137 17.952825622882614 13 15.541207234855165 15.8902441007017 56.486195473150666 12.082353191292462 14 14.902285935102405 21.020998488048832 48.884420149844495 15.192295427004273 15 12.552446196923823 16.74914241479486 56.542846745178075 14.155564643103238 16 13.603308534332797 17.651060679390067 48.7167173776839 20.028913408593237 17 14.152438193212102 18.40053324729343 51.44423226271183 16.002796296782634 18 14.379168339317358 17.814886653685647 50.601216314065645 17.204728692931347 19 15.053606109833433 19.865587666280238 47.06082445734209 18.019981766544234 20 16.583065396577663 18.44492883574758 52.017748230742015 12.954257536932753 21 16.510781875094573 21.474833954246282 48.85453128888522 13.159852881773922 22 14.948432335495587 15.613865930325188 50.37135971806925 19.06634201610997 23 15.051605181903108 21.079400572015274 49.575740749772706 14.293253496308914 24 16.626835695053582 17.939444417348547 47.559055511993684 17.874664375604183 25 13.561414105791561 24.595781293574895 46.49918899889824 15.343615601735305 26 14.238102920229256 17.433084592979995 50.060340482898944 18.268472003891805 27 16.999258406085822 19.05446150652365 46.95077342117407 16.99550666621646 28 13.182988610968335 18.726434383945556 50.77041978217398 17.320157222912126 29 16.34045288502543 16.070077498439904 47.35083394924396 20.238635667290705 30 14.12705142009607 20.166727319794557 50.98551953468421 14.720701725425167 31 15.605612102612588 17.012389495628597 48.1244427103069 19.257555691451913 32 17.087799467002824 19.94462431952818 44.37070191301216 18.596874300456836 33 15.427904690800359 18.147165748115686 44.54015549711178 21.884774063972166 34 17.41132450173768 20.304916404982812 42.5348505369365 19.748908556343004 35 18.291482675090574 20.822531448959456 40.294686660939014 20.59129921501096 36 17.169337280163678 20.772508250701264 38.48634804390536 23.5718064252297 37 17.01201432164166 22.287460809950616 40.54217643432141 20.158348434086307 38 18.432798210169963 22.798072606171115 39.26445889281155 19.504670290847383 39 19.613595805054594 22.20367195286814 37.43461030052687 20.748121941550394 40 20.381076724330907 22.58059675174362 38.86764987262843 18.17067665129704 41 17.692079701961784 24.72158963719425 36.65424840769907 20.932082253144895 42 19.648987217822263 23.38171827184857 38.36341603418585 18.60587847614331 43 19.677000208846852 22.26495037073443 34.58691468168363 23.47113473873509 44 19.662243365360684 23.15036097990443 35.51159350148632 21.67580215324857 45 17.88479407325147 22.398512310083802 36.06985239404774 23.646841222616988 46 21.955681947503155 24.2595003432842 32.94452802487153 20.840289684341112 47 16.74363986298646 21.856761072947577 41.20285782531649 20.196741238749468 48 19.40649976426568 23.680731939436914 33.9362379303402 22.976530365957213 49 18.19831446833469 22.30134224746726 37.96698218798968 21.533361096208367 50 18.880005602598203 21.570753436906365 36.45890781850083 23.090333141994602 51 18.94040861449497 22.004454565804892 33.89822029966397 25.156916520036166 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 50.0 1 889.5 2 1729.0 3 20481.0 4 39233.0 5 30436.5 6 21640.0 7 21289.0 8 20938.0 9 20793.5 10 20649.0 11 20353.5 12 20058.0 13 19682.5 14 19307.0 15 18597.0 16 17887.0 17 17042.0 18 16197.0 19 15478.5 20 14760.0 21 13892.5 22 13025.0 23 12314.0 24 11603.0 25 11325.0 26 10738.5 27 10430.0 28 10753.0 29 11076.0 30 11974.5 31 12873.0 32 13985.0 33 15097.0 34 16723.0 35 18349.0 36 19593.0 37 20837.0 38 22424.5 39 24012.0 40 26427.5 41 28843.0 42 30789.0 43 32735.0 44 35216.5 45 37698.0 46 74857.0 47 112016.0 48 81823.5 49 51631.0 50 47792.5 51 43954.0 52 39312.5 53 34671.0 54 31931.0 55 29191.0 56 27192.5 57 25194.0 58 22751.5 59 20309.0 60 17634.0 61 14959.0 62 12544.5 63 10130.0 64 8336.0 65 6542.0 66 5422.0 67 4302.0 68 3467.5 69 2633.0 70 2092.5 71 1552.0 72 1275.5 73 999.0 74 828.5 75 511.0 76 364.0 77 277.0 78 190.0 79 156.0 80 122.0 81 98.5 82 75.0 83 55.5 84 36.0 85 24.5 86 13.0 87 7.0 88 1.0 89 2.0 90 3.0 91 5.0 92 7.0 93 5.0 94 3.0 95 2.0 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 799629.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 50.1304952152057 #Duplication Level Percentage of deduplicated Percentage of total 1 83.23969491427641 41.72847127615315 2 6.00055619795032 6.016217075398427 3 2.7665089049277243 4.160593842639096 4 1.7880177940677977 3.585368698808735 5 1.279785726449281 3.2078146118127107 6 0.9939337207892069 2.989583378055296 7 0.797480265173545 2.798465643225235 8 0.6276455055458141 2.517134401008783 9 0.4793457649528563 2.162685651875845 >10 1.9528157026448452 14.525852138470219 >50 0.04301990974316112 1.4465667332330623 >100 0.027170355610964845 2.586785372838204 >500 0.0010063094670290736 0.3213460645426124 >1k 0.002012618934058147 3.026933632294835 >5k 0.0 0.0 >10k+ 0.0010063094670290736 8.926181479643828 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GAATCTGTCTCTTATACACATCTGACGCCTTCTTGCTCGTATGCCGTCTTC 19990 2.4999093329531568 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 18846 2.356842985934727 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCCTTCTTGCTCGTATGCCG 17904 2.2390383540366843 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCCTTCTTGCTCGTATGC 14037 1.755439084875611 No Hit GAACTGTCTCTTATACACATCTGACGCCTTCTTGCTCGTATGCCGTCTTCT 4609 0.57639230193002 TruSeq Adapter, Index 27 (95% over 21bp) GAATGATCTGTCTCTTATACACATCTGACGCCTTCTTGCTCGTATGCCGTC 3911 0.4891018209694746 No Hit GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCCTTCTTGCT 3346 0.4184440534297781 No Hit GCTGTCTCTTATACACATCTGACGCCTTCTTGCTCGTATGCCGTCTTCTGC 3326 0.4159428935168684 Illumina Single End Adapter 1 (95% over 21bp) GAATGACTGTCTCTTATACACATCTGACGCCTTCTTGCTCGTATGCCGTCT 3071 0.38405310462727094 No Hit GAATGATACGGCGACTGTCTCTTATACACATCTGACGCCTTCTTGCTCGTA 2938 0.36742039120642195 No Hit GAATGCTGTCTCTTATACACATCTGACGCCTTCTTGCTCGTATGCCGTCTT 1630 0.20384453290213334 No Hit GAATGATACGGCGACCTGTCTCTTATACACATCTGACGCCTTCTTGCTCGT 1170 0.1463178549052123 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 1.250579956454806E-4 0.0 0.0 0.05915243194031232 0.0 2 1.250579956454806E-4 0.0 0.0 0.547754020927205 0.0 3 1.250579956454806E-4 0.0 0.0 0.6554289551779637 0.0 4 1.250579956454806E-4 0.0 0.0 1.356504078766528 0.0 5 1.250579956454806E-4 0.0 0.0 4.304746326108733 0.0 6 1.250579956454806E-4 0.0 0.0 4.635899898577965 0.0 7 1.250579956454806E-4 0.0 0.0 5.1687720180233585 0.0 8 1.250579956454806E-4 0.0 0.0 5.824326031196968 0.0 9 1.250579956454806E-4 0.0 0.0 5.942630895077592 0.0 10 1.250579956454806E-4 0.0 0.0 8.643758543024328 0.0 11 1.250579956454806E-4 0.0 0.0 8.827093564640602 0.0 12 1.250579956454806E-4 0.0 0.0 11.038494101639635 0.0 13 1.250579956454806E-4 0.0 0.0 11.233459516850939 0.0 14 1.250579956454806E-4 0.0 0.0 11.376650921865014 0.0 15 1.250579956454806E-4 0.0 0.0 11.875382208499191 0.0 16 1.250579956454806E-4 0.0 0.0 12.121496343929497 0.0 17 1.250579956454806E-4 0.0 0.0 12.2625617630176 0.0 18 1.250579956454806E-4 0.0 0.0 12.383367786811133 0.0 19 1.250579956454806E-4 0.0 0.0 13.001154285299808 0.0 20 1.250579956454806E-4 0.0 0.0 13.15435032996552 0.0 21 1.250579956454806E-4 0.0 0.0 13.290288371232158 0.0 22 1.250579956454806E-4 0.0 0.0 13.523646591106626 0.0 23 1.250579956454806E-4 0.0 0.0 13.670214562003128 0.0 24 1.250579956454806E-4 0.0 0.0 13.794522209674737 0.0 25 1.250579956454806E-4 0.0 0.0 13.907199463751315 0.0 26 1.250579956454806E-4 0.0 0.0 14.031882285409859 0.0 27 1.250579956454806E-4 0.0 0.0 14.215967655000005 0.0 28 1.250579956454806E-4 0.0 0.0 14.325518459185448 0.0 29 1.250579956454806E-4 0.0 0.0 14.459705688513047 0.0 30 1.250579956454806E-4 0.0 0.0 14.600270875618568 0.0 31 2.501159912909612E-4 0.0 0.0 14.749590122419272 0.0 32 2.501159912909612E-4 0.0 0.0 14.91066482081065 0.0 33 2.501159912909612E-4 0.0 0.0 15.057983139681028 0.0 34 2.501159912909612E-4 0.0 0.0 15.257200526744278 0.0 35 2.501159912909612E-4 0.0 0.0 15.420151095070338 0.0 36 2.501159912909612E-4 0.0 0.0 15.587478693243991 0.0 37 2.501159912909612E-4 0.0 0.0 15.771313946842849 0.0 38 2.501159912909612E-4 0.0 0.0 15.961277042228334 0.0 39 2.501159912909612E-4 0.0 0.0 16.166247097091276 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CTCGTTC 30 2.1646683E-6 45.000004 15 CTCGTCG 20 7.0319965E-4 45.000004 1 TTCGCTA 20 7.0319965E-4 45.000004 21 CGTTTTT 20845 0.0 44.30919 1 TGATACC 2125 0.0 42.458824 4 TACGGCT 1935 0.0 41.860462 7 GATACCT 2145 0.0 41.748253 5 CGATGAA 535 0.0 41.635513 19 ACGGCTG 1925 0.0 41.61039 8 CGGCTGT 1950 0.0 41.192307 9 GAATCTG 2535 0.0 40.56213 1 TCAAGCG 50 1.0804797E-9 40.5 17 CCGATGA 545 0.0 40.458714 18 ATACCTG 2235 0.0 40.167786 6 TATGCGG 45 1.9270374E-8 40.0 2 ATGATAC 6865 0.0 39.919884 3 GAATGAT 7245 0.0 39.565216 1 AATCTGT 2600 0.0 39.46154 2 CGCGCAT 40 3.4564619E-7 39.375004 36 AATCGTT 40 3.4564619E-7 39.375004 22 >>END_MODULE