##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2933315.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 483433 Sequences flagged as poor quality 0 Sequence length 51 %GC 37 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 28.517699453698857 31.0 28.0 31.0 16.0 33.0 2 28.78375286751215 31.0 30.0 33.0 16.0 34.0 3 28.982020259270673 31.0 30.0 33.0 16.0 34.0 4 32.14035864328666 35.0 30.0 37.0 19.0 37.0 5 33.67531384907526 35.0 33.0 37.0 28.0 37.0 6 32.749727469990674 35.0 33.0 37.0 17.0 37.0 7 32.13475290267731 35.0 32.0 35.0 25.0 37.0 8 33.02962147805383 35.0 32.0 35.0 28.0 37.0 9 32.8841038985754 35.0 31.0 37.0 25.0 39.0 10 31.483547875300196 35.0 27.0 39.0 15.0 39.0 11 32.399306625737175 35.0 30.0 39.0 17.0 39.0 12 33.15308843210952 35.0 31.0 39.0 23.0 39.0 13 33.51685962687694 35.0 32.0 39.0 25.0 39.0 14 33.54440636034363 36.0 32.0 40.0 19.0 41.0 15 34.19824463782985 37.0 32.0 40.0 25.0 41.0 16 34.287646892123625 37.0 32.0 40.0 25.0 41.0 17 32.22579550837448 35.0 27.0 39.0 18.0 41.0 18 32.95992412599057 36.0 30.0 39.0 22.0 39.0 19 32.809431710288706 36.0 30.0 37.0 20.0 39.0 20 32.48969557311975 34.0 30.0 37.0 24.0 39.0 21 32.87868432647337 35.0 31.0 37.0 24.0 39.0 22 33.20623747241086 35.0 31.0 38.0 25.0 39.0 23 34.18375245380435 35.0 33.0 38.0 27.0 40.0 24 32.40553913365451 35.0 31.0 37.0 22.0 39.0 25 31.55021481777206 35.0 30.0 37.0 18.0 39.0 26 30.90862229098965 33.0 26.0 37.0 20.0 39.0 27 32.625414483496165 35.0 31.0 38.0 22.0 39.0 28 32.58265571444233 35.0 31.0 38.0 21.0 39.0 29 32.811233407731784 35.0 31.0 38.0 22.0 40.0 30 31.770272199043095 35.0 30.0 38.0 18.0 40.0 31 31.955656730094965 35.0 30.0 38.0 20.0 40.0 32 31.801068607232025 35.0 30.0 38.0 18.0 40.0 33 31.570068654808424 35.0 30.0 38.0 15.0 40.0 34 30.541971689975654 35.0 27.0 38.0 10.0 40.0 35 29.946716504665588 35.0 25.0 38.0 8.0 40.0 36 29.392066739341335 35.0 23.0 38.0 7.0 40.0 37 29.572755686930766 35.0 23.0 38.0 7.0 40.0 38 29.432663885171266 35.0 23.0 38.0 7.0 40.0 39 29.085796790868642 34.0 22.0 38.0 7.0 40.0 40 28.780447342237704 34.0 22.0 38.0 7.0 40.0 41 28.41356506485904 33.0 21.0 38.0 7.0 40.0 42 28.84178159124429 34.0 21.0 38.0 7.0 40.0 43 28.899806177898487 34.0 21.0 38.0 7.0 40.0 44 28.903659866000044 34.0 21.0 38.0 7.0 40.0 45 29.1611247060089 35.0 22.0 38.0 7.0 40.0 46 28.937871432028842 35.0 20.0 38.0 7.0 40.0 47 28.9871481673779 35.0 20.0 38.0 7.0 40.0 48 28.740702434463515 34.0 20.0 38.0 7.0 40.0 49 28.5160839247631 34.0 20.0 38.0 7.0 40.0 50 28.69737688573184 34.0 20.0 38.0 7.0 40.0 51 27.132814681662197 32.0 18.0 37.0 7.0 39.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 5.0 9 16.0 10 27.0 11 23.0 12 36.0 13 74.0 14 109.0 15 196.0 16 454.0 17 877.0 18 1574.0 19 2740.0 20 4384.0 21 6095.0 22 8740.0 23 12038.0 24 16449.0 25 22393.0 26 26527.0 27 25762.0 28 24192.0 29 24336.0 30 27236.0 31 32042.0 32 38064.0 33 43915.0 34 49519.0 35 51394.0 36 39437.0 37 20538.0 38 4177.0 39 64.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 22.367732446895435 2.6344912324975747 37.49826759861242 37.499508721994566 2 38.96155206616015 11.602848791869814 35.15233755246332 14.283261589506715 3 12.184315096404259 11.4311600573399 61.49228538391049 14.89223946234535 4 10.892305655592398 2.8200391781280962 69.0507267811672 17.23692838511231 5 17.725930997677033 3.441221430891147 61.83586970686734 16.99697786456448 6 13.70531180122168 10.146183649026856 64.41885431900594 11.729650230745522 7 54.366996047022035 1.174723281199256 41.52798836653683 2.9302923052418843 8 55.74112648495241 6.989800034337747 33.61603365926612 3.6530398214437163 9 51.599704612635044 2.533546530749866 33.667126571831055 12.199622284784034 10 27.74055556819663 14.65332321128264 42.638380085761625 14.967741134759107 11 20.963401339999546 17.79957098501757 46.12055858826352 15.11646908671936 12 15.882242213502181 15.267472431546874 51.28094275732108 17.569342597629866 13 15.365728032633271 16.46805244987413 55.54130562042724 12.624913897065362 14 14.835354640663754 18.958159662248956 49.57998316209278 16.626502534994508 15 12.666284676470163 17.03214302705856 55.357826213766955 14.943746082704326 16 13.57582126168466 16.457502901125906 49.11435503989177 20.85232079729766 17 14.263610469289437 17.699660552754985 50.72760858278189 17.309120395173686 18 14.184178572832224 16.834597555400645 50.693270835875914 18.28795303589122 19 15.197142106558717 19.720623126679396 46.81289858160283 18.26933618515906 20 16.51749053126286 18.32022224382696 51.4553205925123 13.70696663239787 21 16.997805280152576 20.429304577883595 47.990931525154465 14.581958616809363 22 15.046138761731202 16.41302931326575 49.384299375508085 19.15653254949497 23 15.074477745623488 20.882521466263164 48.122490603661724 15.920510184451619 24 16.046277353842207 17.604921467917993 47.58446361750232 18.764337560737477 25 13.904098396261736 21.729588174576413 46.454420778060246 17.9118926511016 26 14.403650557574679 17.989876570279645 49.3611317390414 18.245341133104276 27 15.704141008164523 18.910996973727485 47.29093793762528 18.093924080482715 28 13.24588929593139 18.215140464138774 50.6138389394187 17.925131300511136 29 15.89299861614743 15.953813661872482 47.587359572060656 20.56582814991943 30 14.176938686436383 19.08537480891871 50.56150490347163 16.176181601173276 31 15.347938597489208 17.24665051827244 48.05650421051107 19.348906673727278 32 16.485635031121166 19.537350573916136 45.44559432227423 18.53142007268846 33 14.887688676610821 17.708968978121064 45.411670283162294 21.991672062105813 34 16.7566136362226 19.799848169239585 42.786694329927826 20.656843864609986 35 16.795295314966086 20.31201841827099 41.115728549768015 21.77695771699491 36 16.89499889333165 19.58968460986321 40.08683726597067 23.42847923083447 37 16.495150310384272 21.53411124188874 41.02760878963579 20.943129658091195 38 18.09268295710057 21.64436436900253 40.553292803759774 19.709659870137124 39 18.56782635856468 21.398001377646956 38.91397566984463 21.12019659394373 40 20.21707247953698 21.352907228095724 39.78421001462457 18.64581027774273 41 17.5678946203507 22.68835598728262 38.34719599199889 21.396553400367786 42 19.33546117042072 21.866111746612248 39.01636834887151 19.78205873409552 43 18.91637517505011 21.069517389172855 36.45861991216984 23.5554875236072 44 18.962089886292414 21.79350602875683 37.323476055627154 21.92092802932361 45 17.790469413548514 21.001255603154938 37.64430644991136 23.563968533385186 46 20.271888762248334 22.73117474396659 35.18460676039906 21.81232973338601 47 16.5609298496379 20.519492876986057 41.949763462568754 20.96981381080729 48 18.727517567067203 21.758134012365726 36.58293910428125 22.931409316285816 49 17.89989512507421 20.619817017042692 38.98223745586255 22.49805040202055 50 18.24658225648642 19.917548036646238 37.93183336677471 23.90403634009263 51 18.458607500936015 20.226794612697105 36.0556685207671 25.258929365599787 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 37.0 1 297.0 2 557.0 3 15448.5 4 30340.0 5 21615.5 6 12891.0 7 12509.5 8 12128.0 9 12003.5 10 11879.0 11 11689.0 12 11499.0 13 11102.5 14 10706.0 15 10296.0 16 9886.0 17 9298.5 18 8711.0 19 8307.5 20 7904.0 21 7420.0 22 6936.0 23 6466.0 24 5996.0 25 5872.0 26 5578.5 27 5409.0 28 5559.5 29 5710.0 30 6263.5 31 6817.0 32 7556.0 33 8295.0 34 9246.5 35 10198.0 36 10946.5 37 11695.0 38 12770.0 39 13845.0 40 15557.0 41 17269.0 42 18965.0 43 20661.0 44 22390.5 45 24120.0 46 40020.0 47 55920.0 48 47268.0 49 38616.0 50 35391.5 51 32167.0 52 27768.5 53 23370.0 54 20785.0 55 18200.0 56 16664.5 57 15129.0 58 13619.0 59 12109.0 60 10694.5 61 9280.0 62 7900.5 63 6521.0 64 5465.0 65 4409.0 66 3779.5 67 3150.0 68 2554.0 69 1958.0 70 1602.5 71 1247.0 72 1043.5 73 840.0 74 697.5 75 426.5 76 298.0 77 229.5 78 161.0 79 148.5 80 136.0 81 105.5 82 75.0 83 56.5 84 38.0 85 20.5 86 3.0 87 4.0 88 5.0 89 5.0 90 5.0 91 4.0 92 3.0 93 2.0 94 1.0 95 0.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 483433.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 53.64349518903311 #Duplication Level Percentage of deduplicated Percentage of total 1 82.5182906865553 44.26569529451466 2 7.304064353068396 7.836310819684254 3 3.208402592944083 5.163297871772318 4 1.9269201973495447 4.134669373446841 5 1.2632870935217744 3.3883567561851464 6 0.86574467553373 2.7864942202154803 7 0.6253692246633995 2.348289369622031 8 0.47701619433246145 2.047105274061143 9 0.3805077770434209 1.837059039649659 >10 1.3614668398405432 10.748874893079323 >50 0.03524848218002164 1.3425047667688756 >100 0.028198785740080445 3.0054038633160323 >500 0.001958249009727809 0.7067583779234625 >1k 0.001958249009727809 1.7549205501767786 >5k 0.0011749494058366852 4.47942787625034 >10k+ 3.9164980194556176E-4 4.154831653333649 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 19776 4.090742667546485 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCCTTCTTGCTCGTATGCCG 8733 1.8064550827105306 No Hit GAATCTGTCTCTTATACACATCTGACGCCTTCTTGCTCGTATGCCGTCTTC 6600 1.3652357203583538 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCCTTCTTGCTCGTATGC 5988 1.23864113537967 No Hit GAACTGTCTCTTATACACATCTGACGCCTTCTTGCTCGTATGCCGTCTTCT 2177 0.4503209338212327 TruSeq Adapter, Index 27 (95% over 21bp) GCTGTCTCTTATACACATCTGACGCCTTCTTGCTCGTATGCCGTCTTCTGC 1908 0.3946772355217786 Illumina Single End Adapter 1 (95% over 21bp) GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCCTTCTTGCT 1792 0.37068218346699544 No Hit GAATGATCTGTCTCTTATACACATCTGACGCCTTCTTGCTCGTATGCCGTC 1416 0.29290511818597403 No Hit GAATGATACGGCGACTGTCTCTTATACACATCTGACGCCTTCTTGCTCGTA 1060 0.2192651308454326 No Hit GAATGACTGTCTCTTATACACATCTGACGCCTTCTTGCTCGTATGCCGTCT 847 0.17520525077932206 No Hit GAATGATACCTGTCTCTTCTACACATCTGACGCCTTCTTGCTCGTATGCCG 747 0.15451986107692275 No Hit GAATGCTGTCTCTTATACACATCTGACGCCTTCTTGCTCGTATGCCGTCTT 674 0.13941952659417126 No Hit CTGTCTCTTATACACATCTGACGCCTTCTTGCTCGTATGCCGTCTTCTGCT 585 0.12100952975903591 TruSeq Adapter, Index 27 (95% over 24bp) GAATCTTTCTCTTATACACATCTGACGCCTTCTTGCTCGTATGCCGTCTTC 511 0.10570234137926042 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.1443840201227471 0.0 2 0.0 0.0 0.0 0.738261558478631 0.0 3 0.0 0.0 0.0 0.970765338733599 0.0 4 0.0 0.0 0.0 1.795491826168259 0.0 5 0.0 0.0 0.0 3.7262661009902094 0.0 6 0.0 0.0 0.0 4.266361626119855 0.0 7 0.0 0.0 0.0 4.801699511617949 0.0 8 0.0 0.0 0.0 5.506450738778693 0.0 9 0.0 0.0 0.0 5.7720511425575 0.0 10 0.0 0.0 0.0 8.23113027037873 0.0 11 0.0 0.0 0.0 8.911265883793618 0.0 12 0.0 0.0 0.0 10.86334611000904 0.0 13 0.0 0.0 0.0 11.156458082092037 0.0 14 0.0 0.0 0.0 11.33166333287136 0.0 15 0.0 0.0 0.0 11.790465276470576 0.0 16 0.0 0.0 0.0 12.101159829800613 0.0 17 0.0 0.0 0.0 12.414750337688988 0.0 18 0.0 0.0 0.0 12.752542751529168 0.0 19 0.0 0.0 0.0 13.47177375148159 0.0 20 0.0 0.0 0.0 13.773987295033645 0.0 21 0.0 0.0 0.0 14.122122403725024 0.0 22 0.0 0.0 0.0 14.580717493427217 0.0 23 0.0 0.0 0.0 14.971257651008516 0.0 24 0.0 0.0 0.0 15.283400181617722 0.0 25 0.0 0.0 0.0 15.554999348410224 0.0 26 0.0 0.0 0.0 15.804672002118185 0.0 27 0.0 0.0 0.0 16.062411957810077 0.0 28 0.0 0.0 0.0 16.319738205707928 0.0 29 0.0 0.0 0.0 16.596508719926028 0.0 30 0.0 0.0 0.0 16.88569046796557 0.0 31 0.0 0.0 0.0 17.155221095787834 0.0 32 0.0 0.0 0.0 17.42289003853688 0.0 33 0.0 0.0 0.0 17.69531662091748 0.0 34 0.0 0.0 0.0 17.96981174226832 0.0 35 0.0 0.0 0.0 18.2610620292781 0.0 36 0.0 0.0 0.0 18.53245434217358 0.0 37 0.0 0.0 0.0 18.832185638961345 0.0 38 0.0 0.0 0.0 19.128607273396728 0.0 39 0.0 0.0 0.0 19.424408346141036 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTATGG 20 7.029225E-4 45.000004 2 ACGGGGC 20 7.029225E-4 45.000004 5 CGAGCAA 20 7.029225E-4 45.000004 24 CCGAACA 20 7.029225E-4 45.000004 34 TGTACGG 30 2.162882E-6 45.000004 2 TTGTACG 25 3.887441E-5 45.0 1 CCGGTGA 25 3.887441E-5 45.0 18 CGTTTTT 13400 0.0 44.395523 1 TACGGCT 795 0.0 42.16981 7 TTATACG 70 0.0 41.785717 26 ACGGCTG 820 0.0 40.884148 8 GAATGAT 3290 0.0 40.69149 1 ATACGGA 50 1.0786607E-9 40.5 28 ATGCTAC 95 0.0 40.263157 3 CGATGAA 95 0.0 40.263157 19 CCGATGA 140 0.0 40.178574 18 CACCGGT 135 0.0 40.000004 16 GATACCT 1280 0.0 39.726566 5 CACGACC 85 0.0 39.705883 27 AATGATA 3140 0.0 39.697453 2 >>END_MODULE