##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2933312.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 825433 Sequences flagged as poor quality 0 Sequence length 51 %GC 41 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 29.341140952687862 31.0 28.0 31.0 25.0 34.0 2 28.520806655416006 31.0 27.0 33.0 16.0 34.0 3 28.58646673927502 31.0 27.0 34.0 16.0 34.0 4 32.9596248272119 35.0 32.0 37.0 28.0 37.0 5 34.10454876410321 35.0 33.0 37.0 30.0 37.0 6 33.54273454053812 35.0 33.0 37.0 28.0 37.0 7 33.25173454417257 35.0 32.0 36.0 28.0 37.0 8 33.34794586598791 35.0 33.0 37.0 28.0 37.0 9 34.41341332367376 37.0 33.0 39.0 27.0 39.0 10 34.14944641176207 37.0 32.0 39.0 27.0 39.0 11 34.42181618617138 37.0 32.0 39.0 27.0 39.0 12 34.561097024228495 37.0 33.0 39.0 27.0 39.0 13 34.802303760571725 37.0 34.0 39.0 27.0 39.0 14 35.59563162606777 38.0 34.0 40.0 27.0 41.0 15 35.826596465128 38.0 34.0 40.0 27.0 41.0 16 35.65266835709258 37.0 34.0 40.0 27.0 41.0 17 35.06861126221026 37.0 33.0 40.0 27.0 41.0 18 34.832888920118286 37.0 33.0 39.0 27.0 40.0 19 34.160163211308486 37.0 32.0 38.0 26.0 40.0 20 33.904840247482234 35.0 32.0 38.0 27.0 40.0 21 34.41356354785913 35.0 33.0 39.0 27.0 40.0 22 35.06763843946147 36.0 33.0 39.0 29.0 40.0 23 35.40613350811029 36.0 34.0 39.0 30.0 40.0 24 34.93678953955076 36.0 33.0 39.0 28.0 40.0 25 33.88374586429183 35.0 33.0 39.0 24.0 40.0 26 34.032492037512434 35.0 33.0 39.0 25.0 40.0 27 34.64988072926573 36.0 33.0 39.0 27.0 40.0 28 34.387647452912596 36.0 33.0 39.0 25.0 40.0 29 34.65331165582185 36.0 33.0 39.0 25.0 40.0 30 33.961570472709475 35.0 33.0 39.0 23.0 40.0 31 33.93289946004097 35.0 33.0 39.0 24.0 40.0 32 33.574196815489564 36.0 33.0 39.0 21.0 40.0 33 33.284083626411835 36.0 33.0 39.0 18.0 40.0 34 33.06579698170536 37.0 33.0 40.0 15.0 41.0 35 32.715605021849136 37.0 32.0 40.0 12.0 41.0 36 32.382479256341824 37.0 31.0 40.0 10.0 41.0 37 32.38600346727112 37.0 31.0 40.0 10.0 41.0 38 32.095156118061674 36.0 31.0 40.0 10.0 41.0 39 31.720116593351612 36.0 30.0 39.0 10.0 40.0 40 31.483494117632805 35.0 30.0 39.0 9.0 40.0 41 30.91099580462618 35.0 27.0 39.0 8.0 40.0 42 31.242315245452993 35.0 29.0 39.0 8.0 40.0 43 31.11292981986424 35.0 29.0 39.0 8.0 40.0 44 31.307831162553473 36.0 29.0 39.0 8.0 40.0 45 31.38723312491747 36.0 30.0 39.0 8.0 40.0 46 31.16030374361093 35.0 29.0 39.0 8.0 40.0 47 31.101486129098305 35.0 29.0 39.0 8.0 40.0 48 30.94269189625324 35.0 29.0 39.0 8.0 40.0 49 31.14820463926206 35.0 29.0 39.0 8.0 40.0 50 31.106940236215415 35.0 29.0 39.0 8.0 40.0 51 29.67046023117564 34.0 24.0 38.0 8.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 2.0 8 17.0 9 66.0 10 53.0 11 57.0 12 78.0 13 106.0 14 142.0 15 199.0 16 363.0 17 673.0 18 1341.0 19 2390.0 20 3893.0 21 5785.0 22 8675.0 23 11895.0 24 17031.0 25 24012.0 26 30388.0 27 33392.0 28 32693.0 29 32947.0 30 35976.0 31 42203.0 32 50549.0 33 61552.0 34 71474.0 35 84797.0 36 93820.0 37 96658.0 38 72145.0 39 10061.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 29.78981940387651 2.679321035141556 35.409415421966415 32.12144413901552 2 30.867799082420984 17.15293670110112 35.70283717757831 16.276427038899584 3 13.895858294979726 17.364704343053887 52.96529215575341 15.77414520621298 4 12.63143101862901 3.228123905877279 65.30402830999003 18.83641676550368 5 22.482139676993775 3.8169057936864657 53.528027108196554 20.172927421123216 6 15.496351611820705 14.74135393181518 57.19289148846727 12.56940296789685 7 59.54389998946008 1.5169008265964652 35.83198151757926 3.1072176663641993 8 58.30963869871933 10.75811119739579 27.15071968288159 3.78153042100328 9 54.89833820552364 3.0517316366076956 26.121926310191135 15.928003847677521 10 33.54457599829423 18.060823834278494 33.52022514244039 14.874375024986886 11 26.442969932144706 17.14978683914988 39.562266107606554 16.844977121098868 12 19.5870530981921 15.823937254749932 44.32994561642193 20.259064030636043 13 18.749916710381097 17.04462990939301 49.83214870255975 14.373304677666146 14 16.912820301587168 22.54550036162838 42.458321874700914 18.083357462083537 15 14.01821831693184 16.388610583778455 51.059867972324824 18.533303126964878 16 16.339060832314676 19.070718035261493 40.83808134639638 23.752139786027453 17 16.77992035695205 19.32234354575114 44.70102358398562 19.196712513311194 18 17.50329826890856 17.98922504915602 43.419635512512826 21.087841169422596 19 16.902280378904162 20.106053428927606 40.04782944224425 22.943836749923978 20 19.707595892095423 20.2206599445382 44.99735290447559 15.074391258890788 21 19.475475295996162 23.327877610902398 41.28305992127768 15.913587171823758 22 17.84760240988669 16.0577539303614 43.6807106088562 22.41393305089571 23 18.28010268549961 22.37165221162711 43.0118495383635 16.33639556450978 24 19.61576530136304 18.722173695502846 40.95389934737283 20.708161655761277 25 16.808996005732748 26.457871202144812 38.32267428125602 18.410458510866416 26 17.24888634207743 17.01397932963669 42.93358758372878 22.8035467445571 27 19.80330323599856 19.07217181770053 40.05219078956136 21.072334156739554 28 14.277718482299592 20.31915370478282 44.217519774469885 21.1856080384477 29 18.747130294039614 17.374517374517374 43.119429438852094 20.75892289259092 30 16.69354145036605 20.6647904796634 44.839375212767116 17.80229285720343 31 19.7703508340471 17.506569279396388 37.706391675641754 25.016688210914754 32 20.1783791052696 20.74571770210302 38.02052983100991 21.055373361617477 33 17.473859174518104 18.71647971428329 34.738252529278576 29.071408581920032 34 19.156248902091388 19.902160441852942 38.57744965369691 22.36414100235876 35 17.01361588402693 22.252199754553065 39.88403662077964 20.850147740640367 36 18.740951718673713 25.405332716283453 33.55341984146503 22.300295723577808 37 18.148656523303526 22.181085563576936 37.337857827346376 22.332400085773163 38 19.58063222575303 23.051295501875984 31.235000296813915 26.13307197555707 39 21.14284260503275 22.21646093626012 31.533389142425854 25.107307316281275 40 19.91427529551157 21.407188711863956 36.96581067149 21.71272532113448 41 18.706182088673458 26.9330157626361 30.479275725588874 23.881526423101572 42 19.175753816481773 22.257772587236033 38.334789134914644 20.23168446136755 43 21.726536254305316 23.02888302260753 31.86824369755026 23.376337025536902 44 22.018746524551357 21.54832675698694 32.90309449707002 23.52983222139168 45 19.60449848746052 20.555514499662603 33.01527804194889 26.824708970927986 46 23.916417201638414 23.31006877602422 31.121726415105766 21.651787607231597 47 16.73303587329317 21.868764636257577 40.09592541126899 21.30227407918026 48 20.189040176489186 23.8592350923697 31.40812155559567 24.543603175545442 49 18.759729741844584 20.9388284694215 38.26125197320679 22.04018981552712 50 20.003804064048808 21.681832444304987 34.85722039220627 23.457143099439932 51 19.378798763800333 20.936526647226366 32.879228235362525 26.805446353610773 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 83.0 1 995.0 2 1907.0 3 20198.5 4 38490.0 5 28174.5 6 17859.0 7 16892.5 8 15926.0 9 15565.0 10 15204.0 11 14526.0 12 13848.0 13 13020.0 14 12192.0 15 11475.5 16 10759.0 17 9909.5 18 9060.0 19 8489.5 20 7919.0 21 7620.0 22 7321.0 23 7116.0 24 6911.0 25 7197.5 26 8209.5 27 8935.0 28 9511.5 29 10088.0 30 11219.0 31 12350.0 32 13218.5 33 14087.0 34 16177.0 35 18267.0 36 19028.5 37 19790.0 38 20882.5 39 21975.0 40 23015.0 41 24055.0 42 25270.5 43 26486.0 44 30229.5 45 33973.0 46 79419.5 47 124866.0 48 89108.5 49 53351.0 50 50010.5 51 46670.0 52 43296.0 53 39922.0 54 39449.0 55 38976.0 56 37893.5 57 36811.0 58 34934.0 59 33057.0 60 29832.0 61 26607.0 62 23949.5 63 21292.0 64 18539.5 65 15787.0 66 13466.0 67 11145.0 68 9471.0 69 7797.0 70 6415.0 71 5033.0 72 4342.0 73 3651.0 74 3123.5 75 2096.0 76 1596.0 77 1165.0 78 734.0 79 544.5 80 355.0 81 241.5 82 128.0 83 91.5 84 55.0 85 36.0 86 17.0 87 14.0 88 11.0 89 7.5 90 4.0 91 3.5 92 3.0 93 1.5 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 825433.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 41.43916741969048 #Duplication Level Percentage of deduplicated Percentage of total 1 80.4629341671797 33.343170000332925 2 5.859205837669672 4.856012233072427 3 2.733137713399884 3.397768538599434 4 1.8838193601648414 3.122556234173002 5 1.4782682635206232 3.0629103031623113 6 1.3124602298059678 3.263235551676896 7 1.071432330391656 3.107948460257827 8 0.9136460875558179 3.0288586547656577 9 0.7783142663059816 2.9027425667928415 >10 3.3922453268853467 20.604155029667165 >50 0.06854384274657614 1.9395868414074973 >100 0.040354774934554985 3.160587039174514 >500 0.0020770840039804326 0.5694319397137219 >1k 0.0020770840039804326 2.8595787497262615 >5k 2.9672628628291895E-4 0.750184466463705 >10k+ 0.0011869051451316758 10.031273391013851 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GAATCTGTCTCTTATACACATCTGACGCTTCCCCTATCGTATGCCGTCTTC 23986 2.905868798557848 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCTTCCCCTATCGTATGCCG 20888 2.530550632213638 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 18656 2.2601470985531233 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCTTCCCCTATCGTATGC 18051 2.18685223391844 No Hit GAACTGTCTCTTATACACATCTGACGCTTCCCCTATCGTATGCCGTCTTCT 6101 0.7391272217127254 TruSeq Adapter, Index 16 (95% over 21bp) GAATGATCTGTCTCTTATACACATCTGACGCTTCCCCTATCGTATGCCGTC 4426 0.5362034229307527 No Hit GCTGTCTCTTATACACATCTGACGCTTCCCCTATCGTATGCCGTCTTCTGC 4107 0.49755703975973825 TruSeq Adapter, Index 13 (95% over 21bp) GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCTTCCCCTAT 4068 0.49283224683287435 No Hit GAATGATACGGCGACTGTCTCTTATACACATCTGACGCTTCCCCTATCGTA 3697 0.44788613975937475 No Hit GAATGACTGTCTCTTATACACATCTGACGCTTCCCCTATCGTATGCCGTCT 3547 0.42971385927143696 No Hit GAATGCTGTCTCTTATACACATCTGACGCTTCCCCTATCGTATGCCGTCTT 1916 0.23212059609925945 No Hit GAATGATACGGCGACCTGTCTCTTATACACATCTGACGCTTCCCCTATCGT 1495 0.18111706219644721 No Hit GAATGATACGGCGCTGTCTCTTATACACATCTGACGCTTCCCCTATCGTAT 898 0.10879138585445458 No Hit GAATGATACGGCCTGTCTCTTATACACATCTGACGCTTCCCCTATCGTATG 893 0.10818564317152332 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.07232567634199262 0.0 2 0.0 0.0 0.0 0.6653477629316976 0.0 3 0.0 0.0 0.0 0.7987323017131615 0.0 4 0.0 0.0 0.0 1.7039541670856386 0.0 5 0.0 0.0 0.0 5.206479508330779 0.0 6 0.0 0.0 0.0 5.60081799491903 0.0 7 0.0 0.0 0.0 6.202562776142946 0.0 8 0.0 0.0 0.0 6.960225723953368 0.0 9 0.0 0.0 0.0 7.105361670783698 0.0 10 0.0 0.0 0.0 10.178900043976919 0.0 11 0.0 0.0 0.0 10.407265035442004 0.0 12 0.0 0.0 0.0 13.129714949608266 0.0 13 0.0 0.0 0.0 13.36716608131732 0.0 14 0.0 0.0 0.0 13.546344766928389 0.0 15 0.0 0.0 0.0 14.144333943518129 0.0 16 0.0 0.0 0.0 14.432182866447064 0.0 17 0.0 0.0 0.0 14.573684357179808 0.0 18 0.0 0.0 0.0 14.681385406204985 0.0 19 0.0 0.0 0.0 15.38210854181987 0.0 20 0.0 0.0 0.0 15.534149955235616 0.0 21 0.0 0.0 0.0 15.655298491821869 0.0 22 0.0 0.0 0.0 15.92776155060435 0.0 23 0.0 0.0 0.0 16.07035337816637 0.0 24 0.0 0.0 0.0 16.197195895972175 0.0 25 0.0 0.0 0.0 16.308410252558353 0.0 26 0.0 0.0 0.0 16.447125326949614 0.0 27 0.0 0.0 0.0 16.640478391341272 0.0 28 0.0 0.0 0.0 16.75593294670797 0.0 29 0.0 0.0 0.0 16.891861604757747 0.0 30 0.0 0.0 0.0 17.06110611036874 0.0 31 0.0 0.0 0.0 17.19618672866241 0.0 32 0.0 0.0 0.0 17.352226043785503 0.0 33 0.0 0.0 0.0 17.506811576469563 0.0 34 0.0 0.0 0.0 17.698953155495357 0.0 35 0.0 0.0 0.0 17.8889140608626 0.0 36 0.0 0.0 0.0 18.0528280308638 0.0 37 0.0 0.0 0.0 18.228008814767524 0.0 38 0.0 0.0 0.0 18.424511741110422 0.0 39 0.0 0.0 0.0 18.70775701964908 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TACCGTC 20 7.03213E-4 45.0 23 CGTTTTT 14810 0.0 43.966915 1 TACGGCT 2290 0.0 42.641922 7 ATACCTG 2745 0.0 41.885246 6 GATACCT 2740 0.0 41.87956 5 TGATACC 2730 0.0 41.868134 4 ACGGCTG 2340 0.0 41.73077 8 CGATGAA 695 0.0 41.11511 19 CACGACC 430 0.0 40.813953 27 CCGATGA 685 0.0 40.729927 18 AATGATC 625 0.0 40.68 2 GAATCTG 2905 0.0 40.430294 1 ACGACCA 430 0.0 40.2907 28 TACCTGT 2840 0.0 40.246475 7 GCGAGAC 425 0.0 40.235294 21 GGCGACT 545 0.0 40.04587 10 ATGATCT 630 0.0 39.999996 3 GAATGAT 8925 0.0 39.932774 1 ACACGAC 435 0.0 39.827587 26 CGAGACA 430 0.0 39.76744 22 >>END_MODULE