##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2933310.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 752491 Sequences flagged as poor quality 0 Sequence length 51 %GC 41 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 29.531490742081964 31.0 28.0 33.0 25.0 34.0 2 28.936029799691955 31.0 28.0 33.0 16.0 34.0 3 28.955623389515623 31.0 28.0 34.0 16.0 34.0 4 33.1642797056709 35.0 32.0 37.0 28.0 37.0 5 34.202308067471904 35.0 33.0 37.0 30.0 37.0 6 33.75169802695314 35.0 33.0 37.0 28.0 37.0 7 33.36780639236881 35.0 32.0 37.0 28.0 37.0 8 33.593835673782145 35.0 33.0 37.0 28.0 37.0 9 34.55487972613626 37.0 34.0 39.0 28.0 39.0 10 34.21811822334088 37.0 32.0 39.0 27.0 39.0 11 34.45432835741557 37.0 32.0 39.0 27.0 39.0 12 34.55895552239163 37.0 33.0 39.0 27.0 39.0 13 34.7809967162398 37.0 34.0 39.0 27.0 39.0 14 35.56482403111798 38.0 34.0 40.0 27.0 41.0 15 35.91600298209546 38.0 34.0 40.0 27.0 41.0 16 35.70107549459063 38.0 34.0 40.0 27.0 41.0 17 35.161635155769304 37.0 33.0 40.0 27.0 41.0 18 34.91090524670727 37.0 33.0 39.0 27.0 40.0 19 34.25591668205998 37.0 32.0 38.0 26.0 40.0 20 34.03124024074707 35.0 32.0 38.0 27.0 40.0 21 34.341468535836306 35.0 33.0 38.0 27.0 40.0 22 34.95537886831869 36.0 33.0 39.0 29.0 40.0 23 35.38163911594956 36.0 34.0 39.0 30.0 40.0 24 34.843687167022594 35.0 33.0 39.0 28.0 40.0 25 33.788137000974096 35.0 33.0 39.0 24.0 40.0 26 33.90215165364104 35.0 32.0 39.0 25.0 40.0 27 34.547534787791484 35.0 33.0 39.0 27.0 40.0 28 34.410661389970116 35.0 33.0 39.0 25.0 40.0 29 34.58528540540684 36.0 33.0 39.0 25.0 40.0 30 33.815114067809446 35.0 33.0 39.0 23.0 40.0 31 33.69103019172322 35.0 33.0 39.0 23.0 40.0 32 33.210575275983366 35.0 32.0 39.0 21.0 40.0 33 32.924986478243596 36.0 32.0 39.0 16.0 40.0 34 32.60332814611736 36.0 32.0 40.0 15.0 41.0 35 32.24983820404496 36.0 31.0 40.0 10.0 41.0 36 31.72297874658966 36.0 30.0 40.0 10.0 41.0 37 31.690777697009 36.0 30.0 40.0 8.0 41.0 38 31.361892700377812 35.0 29.0 39.0 8.0 41.0 39 31.035152579897964 35.0 29.0 39.0 8.0 40.0 40 30.79492246418894 35.0 27.0 39.0 8.0 40.0 41 30.379777299662056 35.0 25.0 39.0 8.0 40.0 42 30.583309302038163 35.0 26.0 39.0 7.0 40.0 43 30.479654906171636 35.0 26.0 39.0 7.0 40.0 44 30.60230354914544 35.0 27.0 39.0 7.0 40.0 45 30.683415482710092 35.0 27.0 39.0 7.0 40.0 46 30.49805645516026 35.0 26.0 39.0 7.0 40.0 47 30.452139626919127 35.0 26.0 39.0 7.0 40.0 48 30.283192755793756 35.0 26.0 38.0 7.0 40.0 49 30.42812339283792 35.0 27.0 39.0 7.0 40.0 50 30.414654793213472 35.0 26.0 39.0 7.0 40.0 51 29.04583975090732 34.0 23.0 38.0 7.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 23.0 9 50.0 10 50.0 11 60.0 12 73.0 13 101.0 14 157.0 15 185.0 16 384.0 17 675.0 18 1370.0 19 2357.0 20 3867.0 21 5821.0 22 8211.0 23 11796.0 24 17041.0 25 24486.0 26 30882.0 27 33357.0 28 32514.0 29 31719.0 30 32957.0 31 38095.0 32 45515.0 33 53798.0 34 61988.0 35 72669.0 36 82220.0 37 86143.0 38 64833.0 39 9093.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 25.801637494667713 2.7894021323843075 37.332273741479966 34.076686631468014 2 33.54339121663914 13.56268712848393 36.93147160564047 15.962450049236468 3 14.350869312722677 13.869135976377125 55.92093460254009 15.8590601083601 4 12.68958698509351 3.3466180990868994 65.11147641632923 18.85231849949036 5 20.395194095344664 3.9377215142772473 56.37608954791485 19.29099484246323 6 16.06052431191868 12.30991467007579 59.135192314592466 12.494368703413064 7 60.14942371403777 1.4506485791856647 35.49411222194019 2.9058154848363635 8 59.838988107498956 8.342159574001549 28.662003930944024 3.1568483875554656 9 56.20239976292075 3.018507862552509 28.18492181301836 12.594170561508378 10 33.70551940156095 17.562070509813406 34.737292539046976 13.995117549578667 11 26.3268265002505 16.98345893837933 40.74972325250402 15.939991308866153 12 20.28675426018384 15.812813708070927 45.40811783795421 18.49231419379102 13 19.31451671847238 15.99819798509218 50.27834219944158 14.40894309699385 14 16.738804849493217 20.284096421086765 45.68174237299848 17.295356356421536 15 14.309008346943685 15.95939353427483 52.256040271577994 17.475557847203486 16 17.561007374174576 17.716623853308544 43.32490355366376 21.397465218853114 17 18.32048489616487 17.744265379918165 45.68652648337322 18.24872324054374 18 18.798231473864803 16.686179635371055 44.99788037332008 19.517708517444063 19 18.42626689222861 18.93019318503477 42.12581944501662 20.51772047772 20 19.664687019512524 19.721830560099722 45.950848581577716 14.662633838810033 21 19.660966044776615 21.64995993307561 43.83839806721941 14.850675954928363 22 18.11941936847085 15.343439323526791 46.036298108548806 20.50084319945355 23 18.230915718593312 20.809152534714702 45.078944465780985 15.880987280911002 24 19.26162572044051 18.71357929862284 42.719314915394335 19.305480065542312 25 17.86612730251923 24.0008186144419 40.45842408746417 17.674629995574698 26 17.35927738670629 17.140271445106986 44.3180051322873 21.18244603589943 27 19.28541338035937 18.295766992562037 41.952794119796785 20.466025507281817 28 15.296661355418204 19.536712066988176 44.94977348566295 20.216853091930666 29 18.65935938104243 18.356232832020584 43.62364466817543 19.360763118761554 30 18.521018856039472 19.846881889617286 42.99626174930996 18.63583750503328 31 22.38126436063687 17.98054727564848 40.43822451032637 19.19996385338828 32 21.35214906224792 22.50910642120637 39.39741471991027 16.74132979663544 33 19.479701418355834 18.407130450729646 39.482199787107085 22.630968343807435 34 20.34403069272589 20.697921968501948 42.20528883401928 16.752758504752883 35 20.392536256247585 22.886253789081863 35.401087853542435 21.32012210112812 36 22.514953667219938 22.209567954965575 34.547788611425254 20.727689766389233 37 19.692594330031852 25.064352929138025 34.754435601223136 20.488617139606983 38 23.51483273554102 22.824591922029633 34.13303282032609 19.527542522103257 39 22.01913378365987 23.70606425857585 34.49689099271619 19.777910965048086 40 23.814371201781814 21.829629856038146 35.79152441690333 18.564474525276715 41 20.358250131895264 23.597092855595612 33.53701240280615 22.50764460970297 42 21.98338584780416 22.428175220700314 36.05531494728841 19.53312398420712 43 21.925710739397548 20.93672881137449 33.54618194769107 23.591378501536894 44 22.75482364573131 21.740459354331147 33.25541435047064 22.249302649466905 45 20.999320922110694 21.07546801224201 32.70431141369133 25.220899651955968 46 23.091571859331207 23.49782256531972 31.706159940783348 21.70444563456573 47 17.90838694416279 22.118271181980916 39.68579026194333 20.287551611912967 48 20.44024446804015 24.53677186836786 32.71627168962818 22.306711973963807 49 20.085688732489825 22.267641739236748 36.488144044247704 21.158525484025724 50 19.695517953038642 21.615939592633 34.98314265552678 23.70539979880158 51 19.384949454544973 22.039599144707378 33.34086387744172 25.23458752330593 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 84.0 1 1011.5 2 1939.0 3 20186.5 4 38434.0 5 28429.0 6 18424.0 7 17523.0 8 16622.0 9 16169.0 10 15716.0 11 15057.0 12 14398.0 13 13366.5 14 12335.0 15 11549.0 16 10763.0 17 10021.0 18 9279.0 19 8652.0 20 8025.0 21 7713.5 22 7402.0 23 7247.0 24 7092.0 25 7149.5 26 7808.5 27 8410.0 28 8812.5 29 9215.0 30 10155.5 31 11096.0 32 12112.5 33 13129.0 34 14966.0 35 16803.0 36 17143.5 37 17484.0 38 18433.5 39 19383.0 40 20602.5 41 21822.0 42 22874.5 43 23927.0 44 26726.5 45 29526.0 46 60816.5 47 92107.0 48 68625.0 49 45143.0 50 43095.5 51 41048.0 52 38777.0 53 36506.0 54 37328.5 55 38151.0 56 36762.5 57 35374.0 58 33619.0 59 31864.0 60 28844.5 61 25825.0 62 23223.5 63 20622.0 64 17949.0 65 15276.0 66 12908.0 67 10540.0 68 9013.0 69 7486.0 70 6233.0 71 4980.0 72 4231.5 73 3483.0 74 2960.5 75 1996.0 76 1554.0 77 1220.5 78 887.0 79 645.0 80 403.0 81 295.0 82 187.0 83 125.0 84 63.0 85 41.0 86 19.0 87 13.5 88 8.0 89 5.5 90 3.0 91 3.5 92 4.0 93 4.0 94 4.0 95 2.5 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 752491.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 43.75631557365955 #Duplication Level Percentage of deduplicated Percentage of total 1 80.49143381901307 35.220085791610686 2 6.011978028345135 5.261240156603545 3 2.7460238307313056 3.6046765593080545 4 1.9855767223919665 3.4752608664278193 5 1.5338189363562593 3.355713270602966 6 1.2642650406342462 3.3191748052042542 7 1.060919260468341 3.249534257145837 8 0.8940256257867661 3.129541393029136 9 0.7065789267521595 2.782556144699865 >10 3.2077220552448487 20.53614263534338 >50 0.05083132967948482 1.541432164456403 >100 0.0409731215219339 3.002658000560177 >500 0.0021564800801007113 0.5551041816522095 >1k 0.0024645486629722418 2.7230839178135713 >5k 0.0 0.0 >10k+ 0.0012322743314861209 8.243795855542139 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 18725 2.488401854640122 No Hit GAATCTGTCTCTTATACACATCTGACGCTCGATTGCTCGTATGCCGTCTTC 16471 2.1888633883993296 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCTCGATTGCTCGTATGCCG 14212 1.8886604623842678 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCTCGATTGCTCGTATGC 11748 1.5612146856241471 No Hit GAACTGTCTCTTATACACATCTGACGCTCGATTGCTCGTATGCCGTCTTCT 4306 0.5722327576010876 No Hit GAATGATCTGTCTCTTATACACATCTGACGCTCGATTGCTCGTATGCCGTC 3005 0.39934032433610506 No Hit GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCTCGATTGCT 2811 0.3735592850944397 No Hit GCTGTCTCTTATACACATCTGACGCTCGATTGCTCGTATGCCGTCTTCTGC 2791 0.3709014459973608 TruSeq Adapter, Index 27 (95% over 22bp) GAATGATACGGCGACTGTCTCTTATACACATCTGACGCTCGATTGCTCGTA 2457 0.3265155330761431 No Hit GAATGACTGTCTCTTATACACATCTGACGCTCGATTGCTCGTATGCCGTCT 2340 0.3109671743582315 No Hit GAATGCTGTCTCTTATACACATCTGACGCTCGATTGCTCGTATGCCGTCTT 1468 0.19508538972559142 No Hit GAATGATACGGCGACCTGTCTCTTATACACATCTGACGCTCGATTGCTCGT 1023 0.13594846981558584 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 1.328919548539451E-4 0.0 0.0 0.050498942844499135 0.0 2 1.328919548539451E-4 0.0 0.0 0.48904239386251797 0.0 3 1.328919548539451E-4 0.0 0.0 0.573561677149627 0.0 4 1.328919548539451E-4 0.0 0.0 1.266061653893535 0.0 5 1.328919548539451E-4 0.0 0.0 3.918585072778279 0.0 6 1.328919548539451E-4 0.0 0.0 4.2343363575112525 0.0 7 1.328919548539451E-4 0.0 0.0 4.684840084466127 0.0 8 1.328919548539451E-4 0.0 0.0 5.253484759286158 0.0 9 1.328919548539451E-4 0.0 0.0 5.377472953164888 0.0 10 1.328919548539451E-4 0.0 0.0 7.727667174756907 0.0 11 1.328919548539451E-4 0.0 0.0 7.939364058839242 0.0 12 1.328919548539451E-4 0.0 0.0 9.942843170217317 0.0 13 1.328919548539451E-4 0.0 0.0 10.145503401369584 0.0 14 1.328919548539451E-4 0.0 0.0 10.28650176546962 0.0 15 1.328919548539451E-4 0.0 0.0 10.748434200541933 0.0 16 1.328919548539451E-4 0.0 0.0 10.98445031236254 0.0 17 1.328919548539451E-4 0.0 0.0 11.11415286029999 0.0 18 1.328919548539451E-4 0.0 0.0 11.236546350720474 0.0 19 1.328919548539451E-4 0.0 0.0 11.804260781856527 0.0 20 1.328919548539451E-4 0.0 0.0 11.941671063175507 0.0 21 1.328919548539451E-4 0.0 0.0 12.064197445550844 0.0 22 1.328919548539451E-4 0.0 0.0 12.30154247691999 0.0 23 1.328919548539451E-4 0.0 0.0 12.433769971999665 0.0 24 1.328919548539451E-4 0.0 0.0 12.556296354375002 0.0 25 1.328919548539451E-4 0.0 0.0 12.658091591793124 0.0 26 1.328919548539451E-4 0.0 0.0 12.786066544317473 0.0 27 1.328919548539451E-4 0.0 0.0 12.953510407433445 0.0 28 1.328919548539451E-4 0.0 0.0 13.061418674774847 0.0 29 1.328919548539451E-4 0.0 0.0 13.194044845719086 0.0 30 1.328919548539451E-4 0.0 0.0 13.364412331841843 0.0 31 1.328919548539451E-4 0.0 0.0 13.500493693612283 0.0 32 1.328919548539451E-4 0.0 0.0 13.655844388836544 0.0 33 1.328919548539451E-4 0.0 0.0 13.808537244963727 0.0 34 1.328919548539451E-4 0.0 0.0 14.004552878373296 0.0 35 1.328919548539451E-4 0.0 0.0 14.206947325615854 0.0 36 1.328919548539451E-4 0.0 0.0 14.379972650835692 0.0 37 1.328919548539451E-4 0.0 0.0 14.563097764624427 0.0 38 1.328919548539451E-4 0.0 0.0 14.787419384417888 0.0 39 1.328919548539451E-4 0.0 0.0 15.204700122659274 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGAATAT 50 2.1827873E-11 45.000004 14 GTTACGT 40 6.8102963E-9 45.0 22 CGTACAT 20 7.031732E-4 45.0 35 TTCGGTA 20 7.031732E-4 45.0 25 CGTTTTT 15405 0.0 44.006817 1 GATACCT 1665 0.0 42.162163 5 CGATGAA 390 0.0 42.115383 19 CCGATGA 385 0.0 42.07792 18 TGATACC 1685 0.0 41.928783 4 TAATCGT 65 0.0 41.538464 21 TACGGCT 1400 0.0 41.464287 7 TCAAGCG 290 0.0 41.12069 17 ATACCTG 1720 0.0 40.944763 6 CTACGAA 55 6.002665E-11 40.909092 11 GCTACGA 55 6.002665E-11 40.909092 10 ACGGCTG 1445 0.0 40.17301 8 CACGACC 315 0.0 40.0 27 GGCGACT 445 0.0 39.94382 10 GAATCTG 2000 0.0 39.9375 1 ATGATAC 5660 0.0 39.75265 3 >>END_MODULE