##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2933308.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 821991 Sequences flagged as poor quality 0 Sequence length 51 %GC 33 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 29.813182869398812 31.0 28.0 33.0 25.0 34.0 2 29.401964255083083 31.0 30.0 33.0 16.0 34.0 3 29.30858853685746 31.0 28.0 34.0 16.0 34.0 4 33.589544167758525 35.0 32.0 37.0 28.0 37.0 5 34.48623403419259 35.0 35.0 37.0 32.0 37.0 6 34.145572153466404 35.0 35.0 37.0 29.0 37.0 7 33.99656565582835 35.0 33.0 37.0 30.0 37.0 8 34.041945714734105 35.0 35.0 37.0 29.0 37.0 9 35.192266095370876 37.0 34.0 39.0 30.0 39.0 10 35.08900462413822 37.0 34.0 39.0 28.0 39.0 11 35.46134203415853 37.0 34.0 39.0 30.0 39.0 12 35.579301963160184 37.0 34.0 39.0 30.0 39.0 13 35.82717937301017 37.0 35.0 39.0 30.0 39.0 14 36.59698463851794 38.0 35.0 41.0 30.0 41.0 15 36.980544799152305 39.0 36.0 41.0 31.0 41.0 16 36.89654144631754 39.0 35.0 41.0 31.0 41.0 17 36.14420717501773 38.0 34.0 40.0 29.0 41.0 18 35.855870684715526 38.0 34.0 39.0 29.0 40.0 19 35.076416895075496 37.0 34.0 38.0 27.0 40.0 20 34.28006146052694 35.0 33.0 38.0 27.0 40.0 21 34.432602060119876 35.0 33.0 38.0 29.0 40.0 22 34.81714519988662 35.0 33.0 39.0 30.0 40.0 23 35.18199590993089 35.0 34.0 39.0 30.0 40.0 24 34.53449855290386 35.0 33.0 38.0 27.0 40.0 25 33.47288838928893 35.0 33.0 38.0 24.0 40.0 26 33.479348314032634 35.0 32.0 38.0 24.0 40.0 27 34.33895018315285 35.0 33.0 38.0 27.0 40.0 28 34.089206572821354 35.0 33.0 39.0 25.0 40.0 29 33.97531359832407 35.0 33.0 39.0 24.0 40.0 30 33.058479959026315 35.0 33.0 38.0 21.0 40.0 31 32.91271193966844 35.0 33.0 38.0 21.0 40.0 32 32.039976106794356 35.0 31.0 38.0 15.0 40.0 33 30.942257275322966 35.0 27.0 39.0 10.0 40.0 34 30.004838252486948 35.0 22.0 39.0 7.0 40.0 35 29.32818850814668 35.0 19.0 39.0 7.0 41.0 36 28.640487547917193 35.0 17.0 39.0 7.0 41.0 37 28.400627257476057 35.0 15.0 39.0 7.0 40.0 38 28.197110430649484 35.0 15.0 39.0 7.0 40.0 39 27.78368011328591 34.0 15.0 39.0 7.0 40.0 40 27.63369915242381 34.0 15.0 39.0 7.0 40.0 41 27.362575745963156 34.0 13.0 39.0 7.0 40.0 42 27.377929928673186 34.0 12.0 39.0 7.0 40.0 43 27.271218298010563 34.0 12.0 39.0 7.0 40.0 44 27.223341861407242 34.0 10.0 39.0 7.0 40.0 45 27.33881149550299 34.0 10.0 39.0 7.0 40.0 46 27.05628528779512 34.0 10.0 39.0 7.0 40.0 47 26.88443425779601 33.0 10.0 39.0 7.0 40.0 48 26.77638197985136 33.0 10.0 38.0 7.0 40.0 49 26.896456287234287 34.0 10.0 39.0 7.0 40.0 50 26.860957115102234 34.0 10.0 39.0 7.0 40.0 51 25.895177684427203 32.0 10.0 37.0 7.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 8.0 9 15.0 10 35.0 11 34.0 12 53.0 13 92.0 14 138.0 15 201.0 16 479.0 17 988.0 18 1967.0 19 3431.0 20 5848.0 21 8773.0 22 13175.0 23 19843.0 24 29544.0 25 43873.0 26 55031.0 27 52937.0 28 43972.0 29 36367.0 30 34102.0 31 35085.0 32 38679.0 33 44635.0 34 52037.0 35 63368.0 36 73184.0 37 83230.0 38 69787.0 39 11080.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 21.15242137687639 2.2204622678350496 30.965424195642044 45.66169215964651 2 45.858774609454365 11.799277607662372 29.833295011745868 12.508652771137395 3 10.153882463433298 12.015946646617785 64.76579427268668 13.064376617262234 4 8.89766432965811 2.360488131865191 74.3065313367178 14.4353162017589 5 16.124872413444916 2.8808101305245435 66.57055855842704 14.423758897603504 6 11.711563751914559 10.227727554194633 68.62106762726113 9.439641066629683 7 47.865122610831506 0.7861399942335136 49.358447963542176 1.9902894313928012 8 47.97984406155298 6.913092722426402 42.92711234064607 2.179950875374548 9 45.37032643909726 2.203187139518559 42.09498644145739 10.331499979926788 10 24.576181491038223 16.151150073419295 48.77170187994759 10.500966555594891 11 17.59325832034657 15.604915382285208 54.70984475499123 12.091981542376985 12 13.129462488032107 14.690671795676593 57.49174869311221 14.688117023179087 13 13.502945896001295 14.809772856393804 61.42330025511228 10.26398099249262 14 13.034327626458197 18.781592499187948 55.49014526923044 12.693934605123413 15 11.035400630907152 15.653577715571096 61.19337073033646 12.11765092318529 16 12.155364231481853 17.042035740050682 54.637337878395265 16.165262150072202 17 12.783473298369447 16.94458941764569 57.675205689600006 12.596731594384853 18 12.983232176508016 16.02462800687599 56.84770271207349 14.144437104542506 19 12.914861598241343 17.651896431956068 54.4822266910465 14.951015278756094 20 14.233002551122823 17.319532695613454 58.09309347669257 10.354371276571154 21 14.421569092605639 19.707393389951957 55.34354999020671 10.5274875272357 22 13.302335427030224 14.48434350254443 56.93638981448702 15.276931255938326 23 12.750504567568258 19.3696767969479 56.42008245832375 11.45973617716009 24 13.822535769856362 16.655413502094305 55.02006712968877 14.501983598360566 25 11.778231148516225 22.60706017462478 53.35423380547962 12.26047487137937 26 13.081895057245152 16.417454692326313 55.89319104467081 14.607459205757728 27 14.510499506685596 18.082923049035816 53.570051253602536 13.836526190676054 28 11.819959099308873 18.02270341159453 56.373974897535376 13.783362591561222 29 16.841546926912827 16.33120070657708 53.32771283383882 13.499539532671282 30 12.860968064127224 21.833937354545245 53.61287410689412 11.692220474433418 31 15.08860802612194 19.647538720010317 50.86977837956863 14.39407487429911 32 17.672456267769356 20.623218502392362 49.18168203788119 12.522643191957089 33 13.849786676496459 22.148904306738153 46.0284844967889 17.972824519976495 34 18.46480070949682 23.605611253651198 44.137466225299306 13.792121811552683 35 16.84398004357712 24.916696168206222 41.60228031693778 16.637043471278883 36 17.731824314378137 24.844675914943107 39.13582995434257 18.287669816336187 37 18.120028078166307 25.835197708977347 40.50275489634315 15.542019316513198 38 17.935476179179577 27.833029802029465 37.978639668804156 16.2528543499868 39 20.727599207290588 25.304534964494746 37.67656823493201 16.291297593282653 40 20.447790790896736 25.946269484702388 38.638865875660436 14.967073848740437 41 18.060173408224664 27.68959757466931 36.679233714237746 17.57099530286828 42 19.565177720923952 25.058911837234227 39.373423796610915 16.00248664523091 43 19.921629312243077 23.493201263760795 37.01792355390752 19.567245870088602 44 19.508729414312324 25.461835956841377 35.929955437468294 19.09947919137801 45 17.68681165608869 24.524112794422322 36.88860340320028 20.900472146288706 46 21.299503279232983 24.751974170033492 35.675451434383106 18.273071116350422 47 16.759794206992535 24.35184813459028 41.11882003574248 17.7695376226747 48 18.687187572613325 25.829723196482686 35.314376921401816 20.168712309502173 49 17.844964239267828 23.858290419238166 39.26746156588089 19.029283775613116 50 18.25701254636608 23.25487748649316 37.90564616887533 20.582463798265433 51 18.006158218277328 23.325681181424127 36.22472752134755 22.443433078950985 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 37.0 1 1117.5 2 2198.0 3 30925.5 4 59653.0 5 45442.5 6 31232.0 7 29987.5 8 28743.0 9 28381.0 10 28019.0 11 27384.5 12 26750.0 13 25969.0 14 25188.0 15 24118.0 16 23048.0 17 21941.5 18 20835.0 19 19289.5 20 17744.0 21 16600.5 22 15457.0 23 14640.5 24 13824.0 25 13581.0 26 13486.5 27 13635.0 28 13852.5 29 14070.0 30 14959.5 31 15849.0 32 16912.0 33 17975.0 34 19482.5 35 20990.0 36 22017.0 37 23044.0 38 24788.5 39 26533.0 40 27629.0 41 28725.0 42 29500.0 43 30275.0 44 32330.0 45 34385.0 46 63774.5 47 93164.0 48 68682.0 49 44200.0 50 40520.0 51 36840.0 52 33084.0 53 29328.0 54 26908.5 55 24489.0 56 22101.5 57 19714.0 58 17676.0 59 15638.0 60 12997.0 61 10356.0 62 8526.5 63 6697.0 64 5401.0 65 4105.0 66 3213.0 67 2321.0 68 1860.0 69 1399.0 70 1069.5 71 740.0 72 621.0 73 502.0 74 436.0 75 359.5 76 349.0 77 248.0 78 147.0 79 99.5 80 52.0 81 34.5 82 17.0 83 12.0 84 7.0 85 6.0 86 5.0 87 3.0 88 1.0 89 1.5 90 2.0 91 1.5 92 1.0 93 0.5 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 821991.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 57.4913515030671 #Duplication Level Percentage of deduplicated Percentage of total 1 82.90754989133751 47.66467093060957 2 7.773669859371476 8.938375727078474 3 3.653462403224725 6.3012747368109885 4 2.11178884498262 4.856383791486076 5 1.2572783718672322 3.6141316407111477 6 0.7277543555876134 2.510374887898534 7 0.45306930756749564 1.8233296771629877 8 0.29614059843371665 1.362041859110516 9 0.18145437984287252 0.9388851779985875 >10 0.5673035534100113 5.286689909951906 >50 0.032927747318689415 1.3607995182465094 >100 0.03292715533558461 3.4839018400095276 >500 0.002124332600222979 0.8033760881613345 >1k 0.0016994660801783832 2.2718762529609524 >5k 0.0 0.0 >10k+ 8.497330400891916E-4 8.783887961802904 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 29723 3.6159763306410895 No Hit GAATCTGTCTCTTATACACATCTGACGCGAAGAAGCTCGTATGCCGTCTTC 15862 1.929704826451871 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCGAAGAAGCTCGTATGCCG 14411 1.753182212457314 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCGAAGAAGCTCGTATGC 11926 1.4508674669187376 No Hit GAACTGTCTCTTATACACATCTGACGCGAAGAAGCTCGTATGCCGTCTTCT 3658 0.44501703789944175 RNA PCR Primer, Index 40 (95% over 22bp) GAATGATCTGTCTCTTATACACATCTGACGCGAAGAAGCTCGTATGCCGTC 2749 0.3344318855072622 No Hit GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCGAAGAAGCT 2708 0.32944399634545873 No Hit GCTGTCTCTTATACACATCTGACGCGAAGAAGCTCGTATGCCGTCTTCTGC 2470 0.3004899080403557 RNA PCR Primer, Index 40 (95% over 24bp) GAATGACTGTCTCTTATACACATCTGACGCGAAGAAGCTCGTATGCCGTCT 2289 0.27847020222849156 No Hit GAATGATACGGCGACTGTCTCTTATACACATCTGACGCGAAGAAGCTCGTA 2026 0.24647471809302046 No Hit GAATGCTGTCTCTTATACACATCTGACGCGAAGAAGCTCGTATGCCGTCTT 1612 0.19610920314212685 No Hit GAATGATACGGCGACCTGTCTCTTATACACATCTGACGCGAAGAAGCTCGT 1090 0.1326048582040436 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTA 830 0.10097434156821669 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 1.216558332147189E-4 0.0 0.0 0.04172795079264858 0.0 2 1.216558332147189E-4 0.0 0.0 0.4132648654304001 0.0 3 1.216558332147189E-4 0.0 0.0 0.4895430728560288 0.0 4 1.216558332147189E-4 0.0 0.0 1.057675813968766 0.0 5 1.216558332147189E-4 0.0 0.0 3.4486995599708514 0.0 6 1.216558332147189E-4 0.0 0.0 3.7931072238017203 0.0 7 1.216558332147189E-4 0.0 0.0 4.225715366713261 0.0 8 1.216558332147189E-4 0.0 0.0 4.7130686345714246 0.0 9 1.216558332147189E-4 0.0 0.0 4.821099014466095 0.0 10 1.216558332147189E-4 0.0 0.0 6.969176061538387 0.0 11 1.216558332147189E-4 0.0 0.0 7.133046468878613 0.0 12 1.216558332147189E-4 0.0 0.0 8.97345591375088 0.0 13 1.216558332147189E-4 0.0 0.0 9.1471804435815 0.0 14 1.216558332147189E-4 0.0 0.0 9.25654903764153 0.0 15 1.216558332147189E-4 0.0 0.0 9.595603844810952 0.0 16 1.216558332147189E-4 0.0 0.0 9.807771617937423 0.0 17 1.216558332147189E-4 0.0 0.0 9.923466315324621 0.0 18 1.216558332147189E-4 0.0 0.0 10.002907574413832 0.0 19 1.216558332147189E-4 0.0 0.0 10.498411783097382 0.0 20 1.216558332147189E-4 0.0 0.0 10.60972687048885 0.0 21 1.216558332147189E-4 0.0 0.0 10.686735012913767 0.0 22 1.216558332147189E-4 0.0 0.0 10.842697791095036 0.0 23 1.216558332147189E-4 0.0 0.0 10.93199317267464 0.0 24 1.216558332147189E-4 0.0 0.0 11.014719139260649 0.0 25 1.216558332147189E-4 0.0 0.0 11.085279522525186 0.0 26 1.216558332147189E-4 0.0 0.0 11.167275554111907 0.0 27 1.216558332147189E-4 0.0 0.0 11.28284859566589 0.0 28 1.216558332147189E-4 0.0 0.0 11.359005147258303 0.0 29 1.216558332147189E-4 0.0 0.0 11.442826016343245 0.0 30 1.216558332147189E-4 0.0 0.0 11.549274870406125 0.0 31 1.216558332147189E-4 0.0 0.0 11.640881712816807 0.0 32 1.216558332147189E-4 0.0 0.0 11.748547125211834 0.0 33 1.216558332147189E-4 0.0 0.0 11.851711271777916 0.0 34 1.216558332147189E-4 0.0 0.0 11.990642233309124 0.0 35 1.216558332147189E-4 0.0 0.0 12.115461118187426 0.0 36 1.216558332147189E-4 0.0 0.0 12.229330978076403 0.0 37 1.216558332147189E-4 0.0 0.0 12.356582979618999 0.0 38 1.216558332147189E-4 0.0 0.0 12.501353421144513 0.0 39 1.216558332147189E-4 0.0 0.0 12.674712983475489 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TACGGTG 45 3.8380676E-10 45.0 7 TCGCGCG 20 7.032113E-4 45.0 1 CGTTTTT 28765 0.0 44.616722 1 CGATGAA 395 0.0 42.72152 19 TACGGCT 1545 0.0 42.524273 7 CCGATGA 405 0.0 42.222225 18 TGATACC 1645 0.0 42.12766 4 GATACCT 1645 0.0 42.12766 5 CGACCTG 155 0.0 42.096775 12 ACGGCTG 1580 0.0 41.724686 8 ATACGGT 60 3.6379788E-12 41.249996 6 GCGACCT 165 0.0 40.90909 11 CGGCTGT 1630 0.0 40.858894 9 ACGGTGA 50 1.0804797E-9 40.5 8 CGCTTTT 625 0.0 40.32 1 ACCCGAA 45 1.9272193E-8 40.0 39 ATACCTG 1745 0.0 39.842407 6 GAATGAT 5765 0.0 39.61405 1 ATGATAC 5420 0.0 39.603317 3 CGCGGGT 80 0.0 39.375 4 >>END_MODULE