##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2933306.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 801893 Sequences flagged as poor quality 0 Sequence length 51 %GC 35 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 29.5140249384893 31.0 28.0 33.0 25.0 34.0 2 28.783285301156138 31.0 28.0 33.0 16.0 34.0 3 28.778218540378827 31.0 28.0 34.0 16.0 34.0 4 33.23415094033743 35.0 32.0 37.0 28.0 37.0 5 34.30102145797507 35.0 33.0 37.0 30.0 37.0 6 33.83015065601022 35.0 33.0 37.0 28.0 37.0 7 33.72723044096906 35.0 33.0 37.0 29.0 37.0 8 33.707633063264055 35.0 33.0 37.0 28.0 37.0 9 34.8010781987123 37.0 34.0 39.0 28.0 39.0 10 34.63761249942324 37.0 33.0 39.0 27.0 39.0 11 35.101972457672034 37.0 34.0 39.0 28.0 39.0 12 35.24170805830703 37.0 34.0 39.0 30.0 39.0 13 35.539419847785176 37.0 34.0 39.0 30.0 39.0 14 36.229705210046724 38.0 34.0 40.0 30.0 41.0 15 36.62973987801365 38.0 35.0 40.0 30.0 41.0 16 36.527483093130876 38.0 34.0 40.0 30.0 41.0 17 35.79755777890566 38.0 34.0 40.0 27.0 41.0 18 35.56548691658364 38.0 34.0 39.0 28.0 40.0 19 34.901831042296166 37.0 34.0 38.0 27.0 40.0 20 34.1582143752346 35.0 33.0 38.0 27.0 40.0 21 34.42807332150299 35.0 33.0 38.0 28.0 40.0 22 34.91399475989939 35.0 33.0 39.0 30.0 40.0 23 35.23555387065357 35.0 34.0 39.0 30.0 40.0 24 34.627597447539756 35.0 33.0 39.0 27.0 40.0 25 33.5154503156905 35.0 33.0 38.0 24.0 40.0 26 33.58962604736542 35.0 32.0 38.0 24.0 40.0 27 34.417731542737 35.0 33.0 39.0 27.0 40.0 28 34.094468962816734 35.0 33.0 39.0 25.0 40.0 29 34.15123214693232 35.0 33.0 39.0 24.0 40.0 30 33.22337020026362 35.0 33.0 39.0 21.0 40.0 31 33.23478319426657 35.0 33.0 39.0 21.0 40.0 32 32.47261043555687 35.0 31.0 39.0 16.0 40.0 33 31.644715691495 35.0 30.0 39.0 11.0 40.0 34 30.9468545055263 36.0 25.0 39.0 8.0 40.0 35 30.33776576176622 36.0 23.0 40.0 7.0 41.0 36 29.68644070967074 35.0 21.0 40.0 7.0 41.0 37 29.576094316822818 35.0 19.0 40.0 7.0 41.0 38 29.41185295295008 35.0 18.0 39.0 7.0 40.0 39 29.004994431925457 35.0 18.0 39.0 7.0 40.0 40 28.883881016544603 35.0 18.0 39.0 7.0 40.0 41 28.50757520018257 35.0 18.0 39.0 7.0 40.0 42 28.728895251610876 35.0 18.0 39.0 7.0 40.0 43 28.628491581794577 35.0 17.0 39.0 7.0 40.0 44 28.687767569987518 35.0 17.0 39.0 7.0 40.0 45 28.85455790236353 35.0 18.0 39.0 7.0 40.0 46 28.547420915259266 35.0 17.0 39.0 7.0 40.0 47 28.477421551254345 35.0 15.0 39.0 7.0 40.0 48 28.279972515036295 35.0 15.0 39.0 7.0 40.0 49 28.47646132339352 35.0 15.0 39.0 7.0 40.0 50 28.430830547217646 35.0 15.0 39.0 7.0 40.0 51 27.259086935538782 33.0 15.0 38.0 7.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 2.0 8 5.0 9 19.0 10 26.0 11 24.0 12 53.0 13 80.0 14 144.0 15 219.0 16 429.0 17 915.0 18 1870.0 19 3355.0 20 5677.0 21 8444.0 22 12458.0 23 18369.0 24 26978.0 25 38685.0 26 47306.0 27 44263.0 28 35740.0 29 30967.0 30 29939.0 31 33523.0 32 39642.0 33 47717.0 34 56799.0 35 69049.0 36 80494.0 37 87609.0 38 70444.0 39 10649.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 24.673491351090483 2.5221569461262288 34.050677584166465 38.75367411861682 2 39.84733624062063 14.760572794624718 32.303062877466196 13.089028087288455 3 10.508883354761794 14.868567252738208 60.929575392228145 13.692974000271857 4 9.188133578918883 2.49397363488645 73.02857114353162 15.289321642663047 5 18.126982028774414 2.9380478442884526 63.09357981675859 15.841390310178541 6 12.154364734447116 12.109845079081623 66.02539241519753 9.710397771273724 7 52.18426897354136 0.7937467966424447 44.88741016569542 2.134574064120774 8 51.88036309083631 8.327544946769706 37.08399998503541 2.7080919773585754 9 48.93969644329106 2.274243571149767 35.973876813988895 12.812183171570272 10 27.11633597001096 15.216868085891758 44.69997867545919 12.966817268638083 11 19.94530442340811 17.213393806904413 48.88183336180762 13.959468407879855 12 14.138170553926772 15.257521888830555 53.38480320940574 17.21950434783693 13 14.56628253395403 16.170985405783565 58.15688626786866 11.105845792393747 14 14.135551750669977 21.33040193641795 50.50698784002354 14.027058472888527 15 11.826390802762962 17.27038395396892 57.826168828010715 13.077056415257395 16 12.675007762881082 18.774325252870394 49.52181899580118 19.028847988447335 17 13.47636155945993 18.74040551544907 53.03550473691627 14.74772818817473 18 13.771163983224694 18.122991471430726 51.89807118904891 16.207773356295665 19 13.59433241093263 19.979099455912447 49.1802522281651 17.246315904989817 20 15.375492740303256 18.911126546808614 53.858183074300435 11.855197638587692 21 15.400683133535273 21.60462804887934 50.627328084919064 12.367360732666329 22 14.067338161076353 15.527133919363306 52.44951633197945 17.956011587580885 23 14.250030864466956 21.3145644119602 51.60027584727638 12.835128876296464 24 15.82019047429021 18.351326174439734 49.31318766967663 16.51529568159343 25 12.36810896216827 25.405509213822793 48.1233780566734 14.103003767335542 26 13.669404770960714 17.645371639358366 51.67123294504379 17.01399064463713 27 16.41565645291828 19.445611821028493 48.006155434702634 16.132576291350592 28 12.494435043079314 18.989316529761453 52.383672135808645 16.132576291350592 29 15.300794495026143 16.87057999009843 51.56261496234536 16.266010552530076 30 13.031663825472975 20.3197932891296 49.419062144201284 17.229480741196145 31 14.86308023639064 18.140325454892363 46.21950808898444 20.777086219732556 32 15.363895183023171 23.369826148875227 45.94528197652305 15.320996691578554 33 14.081429816696241 18.9734790053037 45.24768267088003 21.697408507120027 34 16.220617962745653 20.954291906775595 42.6443428237932 20.180747306685557 35 14.477742042891009 21.806026489818468 39.31372390081969 24.402507566470838 36 15.735889950404855 21.305835067770886 41.99475491119139 20.963520070632864 37 15.52239513251768 25.271950247726316 39.27818299947749 19.927471620278517 38 17.35817621553 23.334285247533025 38.1906314184062 21.116907118530776 39 18.99679882478086 24.811040874530644 36.53667010436554 19.65549019632295 40 17.274000396561636 23.305852526459265 39.59605583288543 19.824091244093665 41 17.260906380277667 25.219948297341414 37.44414778530303 20.07499753707789 42 17.138196741959337 24.261341600437962 38.66887477506351 19.931586882539193 43 19.39323575589262 22.704151301981685 38.00856223960054 19.894050702525153 44 18.888305546999412 23.750051440778257 35.068893231391215 22.29274978083111 45 17.17485998755445 23.363590903025717 35.19659106638915 24.264958043030678 46 21.588541114587606 25.5944371630629 33.77832204545993 19.038699676889557 47 16.438477452727483 23.069661413679878 40.98277450981615 19.50908662377649 48 18.768962941439817 24.659898515138554 33.30606452481815 23.265074018603478 49 16.999649579183256 23.165684199762314 38.32967740085024 21.50498882020419 50 18.68590946672436 22.246359551710764 37.11417857494703 21.953552406617842 51 18.281740830759215 22.594785089781304 34.36181635205695 24.761657727402532 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 32.0 1 840.5 2 1649.0 3 21380.0 4 41111.0 5 32306.0 6 23501.0 7 23179.0 8 22857.0 9 22779.0 10 22701.0 11 22246.0 12 21791.0 13 21268.0 14 20745.0 15 19881.5 16 19018.0 17 18401.5 18 17785.0 19 16682.0 20 15579.0 21 14672.5 22 13766.0 23 13092.0 24 12418.0 25 12267.0 26 12191.0 27 12266.0 28 12883.5 29 13501.0 30 14285.5 31 15070.0 32 16087.5 33 17105.0 34 18825.0 35 20545.0 36 22567.5 37 24590.0 38 25722.5 39 26855.0 40 28219.5 41 29584.0 42 31602.0 43 33620.0 44 36268.0 45 38916.0 46 76855.0 47 114794.0 48 82613.5 49 50433.0 50 46017.0 51 41601.0 52 36677.5 53 31754.0 54 28806.0 55 25858.0 56 23058.5 57 20259.0 58 17630.5 59 15002.0 60 12601.0 61 10200.0 62 8315.5 63 6431.0 64 5048.5 65 3666.0 66 2916.5 67 2167.0 68 1638.5 69 1110.0 70 869.0 71 628.0 72 488.5 73 349.0 74 304.5 75 190.5 76 121.0 77 97.5 78 74.0 79 52.0 80 30.0 81 24.5 82 19.0 83 13.0 84 7.0 85 6.0 86 5.0 87 4.0 88 3.0 89 1.5 90 0.0 91 0.0 92 0.0 93 0.0 94 0.0 95 0.5 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 801893.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 51.60325527896874 #Duplication Level Percentage of deduplicated Percentage of total 1 83.03995673092825 42.8513208554061 2 6.406944369150091 6.612383716788071 3 3.099244540943216 4.797933216547292 4 1.9317177641845737 3.987316996485412 5 1.331102918482718 3.4344621852522 6 0.9594362032321729 2.9706018791564612 7 0.6980171240221158 2.521396908800338 8 0.5234501768400454 2.1609386481038553 9 0.42151043365682894 1.9576179459667948 >10 1.5111922793634844 11.605674612582888 >50 0.04772268120264087 1.701485326400054 >100 0.025565587617909 2.644314736605004 >500 0.0012174089340974861 0.405580536417118 >1k 0.0017043725077364805 2.3558349001923675 >5k 2.434817868194972E-4 0.7449464065728292 >10k+ 9.739271472779888E-4 9.248191128723168 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GAATCTGTCTCTTATACACATCTGACGCTCCATCCTTCGTATGCCGTCTTC 21511 2.68252746937559 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 20770 2.5901211258858727 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCTCCATCCTTCGTATGCCG 16704 2.083070933403833 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCTCCATCCTTCGTATGC 14621 1.8233105913133048 No Hit GAACTGTCTCTTATACACATCTGACGCTCCATCCTTCGTATGCCGTCTTCT 5929 0.7393754528347298 No Hit GAATGATCTGTCTCTTATACACATCTGACGCTCCATCCTTCGTATGCCGTC 3744 0.466895209211204 No Hit GCTGTCTCTTATACACATCTGACGCTCCATCCTTCGTATGCCGTCTTCTGC 3219 0.40142512779136363 No Hit GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCTCCATCCTT 3047 0.3799758820690541 No Hit GAATGACTGTCTCTTATACACATCTGACGCTCCATCCTTCGTATGCCGTCT 2768 0.3451832102287961 No Hit GAATGATACGGCGACTGTCTCTTATACACATCTGACGCTCCATCCTTCGTA 2661 0.3318397841108477 No Hit GAATGCTGTCTCTTATACACATCTGACGCTCCATCCTTCGTATGCCGTCTT 2004 0.2499086536483047 No Hit GAATGATACGGCGACCTGTCTCTTATACACATCTGACGCTCCATCCTTCGT 1307 0.1629893265061548 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.05312429463781328 0.0 2 0.0 0.0 0.0 0.5151560120864006 0.0 3 0.0 0.0 0.0 0.6020753392285504 0.0 4 0.0 0.0 0.0 1.4914708072024572 0.0 5 0.0 0.0 0.0 4.7258175342595585 0.0 6 0.0 0.0 0.0 5.107663990083465 0.0 7 0.0 0.0 0.0 5.612095379308711 0.0 8 0.0 0.0 0.0 6.247466931373637 0.0 9 0.0 0.0 0.0 6.359451946830812 0.0 10 0.0 0.0 0.0 8.969276449601132 0.0 11 0.0 0.0 0.0 9.141743349798539 0.0 12 0.0 0.0 0.0 11.432572674907998 0.0 13 0.0 0.0 0.0 11.641952230534498 0.0 14 0.0 0.0 0.0 11.78112291789553 0.0 15 0.0 0.0 0.0 12.22282773387472 0.0 16 0.0 0.0 0.0 12.477101059617679 0.0 17 0.0 0.0 0.0 12.606669468370468 0.0 18 0.0 0.0 0.0 12.70219343478494 0.0 19 0.0 0.0 0.0 13.278205446362545 0.0 20 0.0 0.0 0.0 13.414009100964842 0.0 21 0.0 0.0 0.0 13.520257690240468 0.0 22 0.0 0.0 0.0 13.758444081691698 0.0 23 0.0 0.0 0.0 13.873172605322655 0.0 24 0.0 0.0 0.0 13.988275243704583 0.0 25 0.0 0.0 0.0 14.081928636364204 0.0 26 0.0 0.0 0.0 14.201645356674769 0.0 27 0.0 0.0 0.0 14.352039486564916 0.0 28 0.0 0.0 0.0 14.453175174243945 0.0 29 0.0 0.0 0.0 14.564037845448208 0.0 30 0.0 0.0 0.0 14.689241582106341 0.0 31 0.0 0.0 0.0 14.817687646606219 0.0 32 0.0 0.0 0.0 14.957481858552201 0.0 33 0.0 0.0 0.0 15.090791414814694 0.0 34 0.0 0.0 0.0 15.256150134743663 0.0 35 0.0 0.0 0.0 15.411283051479437 0.0 36 0.0 0.0 0.0 15.559183083029781 0.0 37 0.0 0.0 0.0 15.721673589867974 0.0 38 0.0 0.0 0.0 15.886782899962963 0.0 39 0.0 0.0 0.0 16.072094406610358 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TGCCTCG 30 2.1646774E-6 45.000004 1 CGGCTAT 30 2.1646774E-6 45.000004 31 AAGACGC 25 3.8897466E-5 45.0 39 CTGCGCG 20 7.03201E-4 45.0 1 ATCCGGC 20 7.03201E-4 45.0 6 TCGTAAC 25 3.8897466E-5 45.0 34 CGTTTTT 22705 0.0 44.64325 1 CGATGAA 540 0.0 44.166668 19 CGGCTGT 1890 0.0 42.61905 9 CCGATGA 555 0.0 42.567566 18 ACGGCTG 1880 0.0 42.486702 8 TACGGCT 1905 0.0 42.04724 7 ACGGTGA 70 0.0 41.785717 8 GATACCT 2135 0.0 41.100704 5 TGATACC 2155 0.0 40.61485 4 ATACCTG 2180 0.0 40.561928 6 CGCTTTT 555 0.0 40.54054 1 GCGATCG 50 1.0804797E-9 40.5 9 GAATGAT 6965 0.0 40.05743 1 TGATCCG 45 1.9270374E-8 40.0 4 >>END_MODULE