##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2933303.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 394374 Sequences flagged as poor quality 0 Sequence length 51 %GC 37 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 28.6167571898756 31.0 28.0 31.0 16.0 33.0 2 28.910937333597044 31.0 30.0 33.0 16.0 34.0 3 29.11419109779042 31.0 30.0 33.0 16.0 34.0 4 32.075332045215966 35.0 30.0 37.0 19.0 37.0 5 33.67273451089575 35.0 33.0 37.0 28.0 37.0 6 32.78690532337325 35.0 33.0 37.0 17.0 37.0 7 32.048093941284165 35.0 31.0 35.0 25.0 37.0 8 32.93019570255645 35.0 32.0 35.0 27.0 37.0 9 32.879175604882676 35.0 31.0 37.0 25.0 39.0 10 31.21099514673888 35.0 27.0 39.0 15.0 39.0 11 32.13176325011284 35.0 27.0 39.0 15.0 39.0 12 32.94165944002393 35.0 31.0 39.0 22.0 39.0 13 33.23841074715879 35.0 31.0 39.0 24.0 39.0 14 33.445364045297104 36.0 31.0 39.0 19.0 41.0 15 34.04340803399818 36.0 32.0 40.0 25.0 41.0 16 34.146234285221645 36.0 32.0 40.0 25.0 41.0 17 32.05993042137666 35.0 27.0 39.0 18.0 41.0 18 32.84486046240371 36.0 30.0 39.0 21.0 39.0 19 32.665736077936174 36.0 30.0 37.0 19.0 39.0 20 32.42708190702227 34.0 30.0 37.0 24.0 39.0 21 32.81294659384239 35.0 31.0 37.0 24.0 39.0 22 33.11724403738583 35.0 31.0 38.0 25.0 39.0 23 34.128502386059935 35.0 33.0 38.0 27.0 40.0 24 32.41633576249956 35.0 31.0 37.0 22.0 39.0 25 31.63218417035606 35.0 30.0 37.0 18.0 39.0 26 30.93218619888735 33.0 26.0 37.0 20.0 39.0 27 32.592260138852964 35.0 31.0 38.0 22.0 39.0 28 32.620636755972754 35.0 31.0 38.0 22.0 39.0 29 32.87707353933069 35.0 31.0 38.0 22.0 40.0 30 31.802403302448944 35.0 30.0 38.0 18.0 40.0 31 32.13499115053224 35.0 30.0 38.0 21.0 40.0 32 32.06571427122478 35.0 30.0 38.0 19.0 40.0 33 32.15730753041529 35.0 31.0 38.0 18.0 40.0 34 31.38217783119577 35.0 30.0 38.0 14.0 40.0 35 30.939151668213423 35.0 29.0 38.0 10.0 40.0 36 30.303792846384397 35.0 27.0 38.0 9.0 40.0 37 30.424574135211753 35.0 27.0 38.0 8.0 40.0 38 30.10666017536653 35.0 25.0 38.0 8.0 40.0 39 29.757740114713446 35.0 25.0 38.0 8.0 40.0 40 29.338957436342152 34.0 23.0 38.0 8.0 40.0 41 28.98742817731392 34.0 23.0 38.0 8.0 40.0 42 29.4554331675009 34.0 23.0 38.0 8.0 40.0 43 29.34423161770299 34.0 23.0 38.0 7.0 40.0 44 29.353742893801314 34.0 23.0 38.0 7.0 40.0 45 29.620938500002534 35.0 23.0 38.0 7.0 40.0 46 29.337332075643932 34.0 23.0 38.0 7.0 40.0 47 29.376137879271962 35.0 23.0 38.0 7.0 40.0 48 29.105506448193847 34.0 23.0 38.0 7.0 40.0 49 28.94672569692728 34.0 23.0 37.0 7.0 40.0 50 29.14222032892635 34.0 23.0 38.0 7.0 40.0 51 27.455704483561288 32.0 20.0 36.0 7.0 39.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 2.0 9 13.0 10 14.0 11 20.0 12 33.0 13 46.0 14 82.0 15 212.0 16 329.0 17 653.0 18 1197.0 19 1958.0 20 2939.0 21 4390.0 22 5925.0 23 8306.0 24 11107.0 25 15266.0 26 19618.0 27 21803.0 28 21719.0 29 22496.0 30 24361.0 31 28027.0 32 32085.0 33 35936.0 34 40375.0 35 43498.0 36 32216.0 37 16350.0 38 3336.0 39 61.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 22.07244899511631 2.529324955499095 36.921298057174155 38.47692799221044 2 38.18228382195581 11.145258054537063 37.1294760810804 13.542982042426733 3 13.077687677179531 10.997175270175012 61.93689239148625 13.988244661159206 4 12.032486928651483 2.7453635381642805 68.57373964815125 16.64840988503299 5 18.604421183952287 3.3234949565640735 61.5550213756485 16.51706248383514 6 13.862982853839249 10.386080218269967 63.33784681545944 12.413090112431346 7 54.880139157246674 1.2039333221764112 40.91268694183693 3.003240578739978 8 56.68502487486498 7.555518365815191 32.188227418643216 3.571229340676617 9 52.78872339454427 2.593223691216967 32.737705832534594 11.88034708170417 10 29.95202523492928 17.019377545172855 38.750779716715606 14.277817503182257 11 22.67162642567715 16.9648607666834 46.23631375293503 14.127199054704418 12 18.357193932662906 15.402638104946067 48.67384766744258 17.56632029494845 13 16.77012176259084 16.076871193334245 53.73503324255656 13.417973801518357 14 14.839213538417848 18.21976093758716 48.92538554772881 18.015639976266186 15 13.02038166816271 16.103495666550028 54.78403748725829 16.092085178028977 16 14.604664607707404 15.764223807857517 47.634986079204005 21.996125505231078 17 14.981717861725164 16.539122761642503 50.887482440526 17.591676936106335 18 14.79230375227576 15.63642633642177 50.82256943916181 18.74870047214066 19 15.170117705528256 18.900079619853237 47.06598305162105 18.86381962299746 20 17.448411913564282 17.14261082120018 51.49097050008368 13.91800676515186 21 17.83231146069467 20.531272345540017 46.65621973050962 14.980196463255691 22 15.857789813730113 16.025143645372157 48.903578836333025 19.213487704564702 23 16.259439009671024 20.172983005979095 47.0989466851263 16.46863129922358 24 16.136966432878435 16.842134623479236 47.65831418906926 19.36258475457307 25 14.426407420367468 20.80816686698413 46.426234995207594 18.339190717440804 26 14.718515926506312 17.258490671291717 50.13819369431047 17.884799707891492 27 15.886696384650104 17.972787252709356 46.70008671971276 19.44042964292778 28 13.145136342659505 18.26033156343978 50.852490275728115 17.742041818172595 29 17.58685917428634 15.388184819486073 48.83587660444147 18.18907940178612 30 16.48790234650357 19.54413830526353 47.81349683295552 16.154462515277377 31 17.88124977812939 17.005431392536018 44.9606211362818 20.152697693052787 32 19.64429703783718 19.314407136373088 45.0278162353502 16.013479590439534 33 16.827174205196084 17.611962249032644 44.423060343734626 21.137803202036647 34 19.149335402435252 19.35599202787202 44.427624539143046 17.06704803054968 35 18.961442691455318 20.203664541780135 42.50914106913742 18.325751697627126 36 17.66115413287894 19.95719798972549 42.18736529284385 20.194282584551722 37 22.0306105372058 20.732604076333633 40.33354125779083 16.90324412866974 38 18.208857581889273 21.565569738370176 41.19363852586631 19.031934153874243 39 22.962720666169677 21.12588558069244 39.130368634849155 16.78102511828873 40 18.50908021319864 20.58832478814526 43.06191584637932 17.840679152276774 41 18.91681500301744 21.567598269662806 40.67915227677281 18.836434450546943 42 17.45322967538428 21.05285845415773 42.295384584176446 19.19852728628155 43 18.373422183003953 20.324108587280097 40.61753563875914 20.68493359095681 44 20.900211474387255 20.850258891306222 38.09733907407689 20.15219056022963 45 17.855893136971503 20.730068412217843 38.98000375278289 22.43403469802776 46 20.958785315461974 22.47232322617617 37.66044414692652 18.90844731143534 47 16.5834968836688 20.12277685648648 44.233646234285224 19.060080025559493 48 20.186929158615932 21.24303326284187 37.65993701410336 20.91010056443883 49 17.66368979699473 19.795929751961335 41.51363933727883 21.02674111376511 50 18.257542332912415 19.179509805413137 40.34266964860767 22.220278213066784 51 19.17621344206261 19.481507401603555 38.63921049562091 22.703068660712926 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 53.0 1 362.5 2 672.0 3 18307.0 4 35942.0 5 23901.5 6 11861.0 7 11437.0 8 11013.0 9 10683.5 10 10354.0 11 9810.0 12 9266.0 13 8389.5 14 7513.0 15 6848.0 16 6183.0 17 5660.5 18 5138.0 19 4695.0 20 4252.0 21 3999.0 22 3746.0 23 3525.0 24 3304.0 25 3337.0 26 3496.0 27 3622.0 28 3870.0 29 4118.0 30 4720.0 31 5322.0 32 5860.0 33 6398.0 34 7341.0 35 8284.0 36 8653.0 37 9022.0 38 9592.0 39 10162.0 40 10828.0 41 11494.0 42 12844.5 43 14195.0 44 15492.5 45 16790.0 46 28197.0 47 39604.0 48 34559.0 49 29514.0 50 28006.5 51 26499.0 52 22968.0 53 19437.0 54 18012.0 55 16587.0 56 15450.5 57 14314.0 58 13234.5 59 12155.0 60 10908.0 61 9661.0 62 8501.5 63 7342.0 64 6469.0 65 5596.0 66 4680.5 67 3765.0 68 3284.0 69 2803.0 70 2334.0 71 1865.0 72 1567.0 73 1269.0 74 1046.0 75 675.0 76 527.0 77 413.0 78 299.0 79 222.5 80 146.0 81 94.5 82 43.0 83 35.0 84 27.0 85 22.5 86 18.0 87 9.5 88 1.0 89 3.0 90 5.0 91 2.5 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 394374.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 43.79860584223858 #Duplication Level Percentage of deduplicated Percentage of total 1 80.68680578382387 35.33969603194958 2 6.72446577120228 5.890444516250271 3 2.841734029618112 3.7339196601516007 4 1.809054797940578 3.169363121680398 5 1.3136286698994368 2.8767552167994785 6 1.0878088635252927 2.8586706987142683 7 0.8880002103922022 2.7225219841955095 8 0.715663444832834 2.507604890874556 9 0.6278804738624997 2.4750260451667447 >10 3.2154761883806677 21.693176382916292 >50 0.05180523324973889 1.5545207798615592 >100 0.03061218328393661 2.57582726668054 >500 0.0029434791619169817 0.9279682014798061 >1k 0.0029434791619169817 3.2758644067243505 >5k 5.886958323833963E-4 1.907246675839435 >10k+ 5.886958323833963E-4 6.491394120715643 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 25176 6.383787977909295 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCTGCGTGTTTCGTATGCCG 7397 1.8756307464488025 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCTGCGTGTTTCGTATGC 4528 1.1481487116290627 No Hit GAATCTGTCTCTTATACACATCTGACGCTGCGTGTTTCGTATGCCGTCTTC 3477 0.8816504130596845 No Hit GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCTGCGTGTTT 1940 0.4919188384629818 No Hit GCTGTCTCTTATACACATCTGACGCTGCGTGTTTCGTATGCCGTCTTCTGC 1592 0.40367772723353973 TruSeq Adapter, Index 14 (95% over 21bp) GAACTGTCTCTTATACACATCTGACGCTGCGTGTTTCGTATGCCGTCTTCT 1168 0.29616556872410454 No Hit GAATGATCTGTCTCTTATACACATCTGACGCTGCGTGTTTCGTATGCCGTC 967 0.24519871999675436 No Hit GAATGATACGGCGACTGTCTCTTATACACATCTGACGCTGCGTGTTTCGTA 901 0.2284633368325498 No Hit GAATGATACCTGTCTCTTCTACACATCTGACGCTGCGTGTTTCGTATGCCG 638 0.1617753705873105 No Hit CTGTCTCTTATACACATCTGACGCTGCGTGTTTCGTATGCCGTCTTCTGCT 547 0.13870082713363457 TruSeq Adapter, Index 21 (95% over 22bp) GAATGACTGTCTCTTATACACATCTGACGCTGCGTGTTTCGTATGCCGTCT 546 0.1384472607220557 No Hit GAATGATACGGCGACCTGTCTCTTATACACATCTGACGCTGCGTGTTTCGT 414 0.10497649439364665 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTA 395 0.10015873257364835 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.17749648810519963 0.0 2 0.0 0.0 0.0 0.9113176832144106 0.0 3 0.0 0.0 0.0 1.1179743086511789 0.0 4 0.0 0.0 0.0 1.7108125789225457 0.0 5 0.0 0.0 0.0 3.0630822518725878 0.0 6 0.0 0.0 0.0 3.3714190083524778 0.0 7 0.0 0.0 0.0 3.726158418151298 0.0 8 0.0 0.0 0.0 4.265494175579526 0.0 9 0.0 0.0 0.0 4.4343694056910445 0.0 10 0.0 0.0 0.0 7.336944119034216 0.0 11 0.0 0.0 0.0 8.042112309635016 0.0 12 0.0 0.0 0.0 9.937774802598549 0.0 13 0.0 0.0 0.0 10.173084432543728 0.0 14 0.0 0.0 0.0 10.314828056616308 0.0 15 0.0 0.0 0.0 10.777586757747722 0.0 16 0.0 0.0 0.0 11.106462393565499 0.0 17 0.0 0.0 0.0 11.44548068584643 0.0 18 0.0 0.0 0.0 11.76928499343263 0.0 19 0.0 0.0 0.0 12.613407577578643 0.0 20 0.0 0.0 0.0 12.933661955402739 0.0 21 0.0 0.0 0.0 13.2795265407963 0.0 22 0.0 0.0 0.0 13.774741742609807 0.0 23 0.0 0.0 0.0 14.128466886762311 0.0 24 0.0 0.0 0.0 14.40181147844432 0.0 25 0.0 0.0 0.0 14.64574236638318 0.0 26 0.0 0.0 0.0 14.880291297093622 0.0 27 0.0 0.0 0.0 15.108501067514593 0.0 28 0.0 0.0 0.0 15.3374715371703 0.0 29 0.0 0.0 0.0 15.566949139649166 0.0 30 0.0 0.0 0.0 15.829390375633283 0.0 31 0.0 0.0 0.0 16.062925040697408 0.0 32 0.0 0.0 0.0 16.29620613934996 0.0 33 0.0 0.0 0.0 16.51554108536567 0.0 34 0.0 0.0 0.0 16.76327546947821 0.0 35 0.0 0.0 0.0 17.02343460775812 0.0 36 0.0 0.0 0.0 17.258490671291717 0.0 37 0.0 0.0 0.0 17.472247156252696 0.0 38 0.0 0.0 0.0 17.72124937242313 0.0 39 0.0 0.0 0.0 17.972787252709356 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ACCGGTC 20 7.027643E-4 45.000004 17 ATAAGCG 20 7.027643E-4 45.000004 33 TGCTACG 55 1.8189894E-12 45.000004 4 ATACAGC 20 7.027643E-4 45.000004 28 GTGCACT 25 3.8861293E-5 45.0 39 CGGGATC 85 0.0 45.0 6 CACCGGT 140 0.0 45.0 16 TATACGG 25 3.8861293E-5 45.0 27 CGTTTTT 10525 0.0 44.18765 1 GATACCT 1005 0.0 42.985073 5 TGATACC 1035 0.0 41.95652 4 TACGGCT 620 0.0 41.370968 7 TAGGGAT 60 3.6379788E-12 41.249996 5 GAATGAT 2925 0.0 41.23077 1 ATGATAC 2810 0.0 40.99644 3 ACATACG 55 6.002665E-11 40.909092 17 AATGATA 2790 0.0 40.887096 2 TGATACG 1785 0.0 40.714287 4 CGGGCTA 50 1.0768417E-9 40.5 6 CGGCTGT 640 0.0 40.42969 9 >>END_MODULE