##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2933295.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 453309 Sequences flagged as poor quality 0 Sequence length 51 %GC 37 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 28.554577561883836 31.0 28.0 31.0 16.0 33.0 2 28.82693924012098 31.0 30.0 33.0 16.0 34.0 3 29.02545724880821 31.0 30.0 33.0 16.0 34.0 4 32.04526713566243 35.0 30.0 37.0 19.0 37.0 5 33.67193239048861 35.0 33.0 37.0 28.0 37.0 6 32.706370268404115 35.0 33.0 37.0 17.0 37.0 7 32.13589847102087 35.0 32.0 35.0 25.0 37.0 8 32.86173007815861 35.0 32.0 35.0 27.0 37.0 9 33.03075165064007 35.0 31.0 37.0 25.0 39.0 10 31.470153912673254 35.0 27.0 39.0 15.0 39.0 11 32.324017392110015 35.0 28.0 39.0 17.0 39.0 12 33.16591331740601 35.0 31.0 39.0 23.0 39.0 13 33.370674308253314 35.0 31.0 39.0 25.0 39.0 14 33.58031276678822 36.0 32.0 40.0 20.0 41.0 15 34.128157614342534 37.0 32.0 40.0 25.0 41.0 16 34.29278924530508 37.0 32.0 40.0 25.0 41.0 17 32.26278984092529 35.0 27.0 39.0 18.0 41.0 18 32.960841280451085 36.0 30.0 39.0 22.0 39.0 19 32.75680165185337 36.0 30.0 37.0 20.0 39.0 20 32.466997125581 34.0 30.0 37.0 24.0 39.0 21 32.88946391975452 35.0 31.0 37.0 24.0 39.0 22 33.09618604528037 35.0 31.0 38.0 25.0 39.0 23 34.120079239547415 35.0 33.0 38.0 27.0 40.0 24 32.441947986914 35.0 31.0 37.0 22.0 39.0 25 31.61161591761911 35.0 30.0 37.0 18.0 39.0 26 30.797054547780874 33.0 25.0 37.0 19.0 39.0 27 32.481095676459105 35.0 30.0 37.0 22.0 39.0 28 32.51666302676541 35.0 31.0 38.0 21.0 39.0 29 32.73614245470529 35.0 31.0 38.0 22.0 40.0 30 31.653704206181654 35.0 30.0 38.0 18.0 40.0 31 31.96460912975476 35.0 30.0 37.0 21.0 40.0 32 31.845421114515705 35.0 30.0 37.0 18.0 40.0 33 31.80175332940665 35.0 30.0 38.0 16.0 40.0 34 30.934750909423816 35.0 29.0 38.0 12.0 40.0 35 30.50240343783159 35.0 28.0 38.0 10.0 40.0 36 29.713678748932846 35.0 25.0 38.0 8.0 40.0 37 29.90833846228511 35.0 25.0 38.0 8.0 40.0 38 29.77306208347948 35.0 24.0 38.0 8.0 40.0 39 29.42387201665972 34.0 23.0 38.0 7.0 40.0 40 29.358395708004917 34.0 23.0 38.0 8.0 40.0 41 28.72489846881487 33.0 22.0 38.0 7.0 40.0 42 29.1875210948823 34.0 23.0 38.0 7.0 40.0 43 28.957675669355783 34.0 22.0 38.0 7.0 40.0 44 29.049910767269125 34.0 22.0 38.0 7.0 40.0 45 29.292213479105865 35.0 23.0 38.0 7.0 40.0 46 29.06023043883973 34.0 23.0 38.0 7.0 40.0 47 29.152284644690486 34.0 23.0 38.0 7.0 40.0 48 28.896384144148914 34.0 23.0 38.0 7.0 40.0 49 28.739833093982252 34.0 22.0 37.0 7.0 40.0 50 28.804281406281365 34.0 22.0 38.0 7.0 40.0 51 27.358009657871342 32.0 20.0 36.0 7.0 39.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 2.0 9 14.0 10 18.0 11 17.0 12 40.0 13 54.0 14 95.0 15 212.0 16 441.0 17 855.0 18 1386.0 19 2298.0 20 3507.0 21 4942.0 22 7112.0 23 9825.0 24 13371.0 25 18216.0 26 23601.0 27 25918.0 28 25306.0 29 25657.0 30 28309.0 31 32616.0 32 36731.0 33 41148.0 34 45893.0 35 48943.0 36 35146.0 37 17967.0 38 3609.0 39 60.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 22.978806950667206 2.611243103490114 34.51751454306003 39.89243540278265 2 40.574751438864 11.592754611093095 34.49699873596156 13.335495214081345 3 13.066804321114295 11.382081538200211 61.90611701951649 13.644997121169004 4 11.726658857423965 2.9785422305756115 69.18525773809918 16.109541173901246 5 18.853364923264262 3.3211341491124156 61.28909860602811 16.536402321595205 6 14.015825849475744 10.870730561272774 63.46862736014507 11.644816229106416 7 52.58796979543755 1.2958048483484774 43.23982096097805 2.876404395235921 8 53.571846135858756 8.078154195041352 34.507808139701616 3.8421915293982694 9 49.96503488790207 2.5516810828816547 34.97305370067658 12.510230328539693 10 29.026116843036426 16.298374839237695 41.05235060411331 13.623157713612569 11 22.290314112448684 16.341171254045253 47.63792468272194 13.730589950784122 12 18.202153497945112 14.548133833654306 50.45785545841799 16.791857209982595 13 16.575227935028867 15.30148309431315 55.276202325566004 12.847086645091979 14 14.814398125781752 17.948022210015687 49.308529060751056 17.92905060345151 15 11.909095120546912 15.623779805827812 56.5689187728459 15.89820630077938 16 13.0923939299683 15.034336401880394 49.96635848836004 21.90691117979127 17 13.89537820780086 15.928207911159936 52.79555446726184 17.380859413777358 18 14.041636058406077 15.014482395010909 52.26920268514414 18.67467886143889 19 14.704539287770594 17.762497545824154 49.117268794575004 18.415694371830252 20 16.97627887379249 16.399630274272077 53.23322501869585 13.390865833239578 21 17.327032995153417 19.621494389037057 48.135598454917066 14.915874160892459 22 15.081765418290836 15.781508860402067 50.22071037636579 18.916015344941307 23 15.20486026088165 20.115417959934614 48.699672850086806 15.98004892909693 24 15.852321484903234 16.072480361078203 49.21234742747221 18.862850726546352 25 14.075829070236859 20.621033334877534 47.28827356174265 18.014864033142956 26 14.646080267543773 17.660800910637114 49.94584268126157 17.747276140557545 27 15.430092938812157 18.620631842738618 48.03257821927207 17.916696999177162 28 13.082246326457229 18.8752043308207 51.88293195149446 16.159617391227616 29 16.854066431506986 17.075328308063593 48.511500984979335 17.55910427545008 30 16.633245755103033 19.99607331864137 48.51083918475036 14.859841741505242 31 17.160921137678713 19.245591858974784 45.828783456759076 17.764703546587427 32 19.321478285231485 20.364696046184832 45.69907061187843 14.61475505670525 33 18.173034287869864 18.299438131605594 43.66227010714546 19.865257473379085 34 19.247356659585403 22.74122066846235 41.834377874694745 16.1770447972575 35 20.035119532151356 20.795086795100033 40.71902388878226 18.450769783966344 36 18.12957607283332 25.25628213867362 39.61359690630453 17.000544882188528 37 19.40662991469395 22.487309980609254 42.52926811512677 15.57679198957003 38 20.685227957088873 23.72664120941786 38.689061986415446 16.89906884707782 39 20.882003225173115 22.118025452836807 40.49952681283628 16.5004445091538 40 23.411844900498334 21.341071984010906 39.01532949930401 16.23175361618675 41 19.92349589352958 22.67173164441915 40.21032011277076 17.19445234928051 42 19.213825447983606 22.103024647646528 41.031172996785855 17.65197690758401 43 19.0388895874558 21.531891050034304 39.69367473401146 19.73554462849844 44 20.724494770675193 21.698223507585336 38.40912048955569 19.168161232183785 45 18.207227299700644 22.54731320137037 38.09410358055984 21.15135591836915 46 20.10372615588925 23.872678459946748 38.25955363780556 17.764041746358444 47 17.30276698675738 21.233198546686697 43.32409019013521 18.13994427642072 48 20.035340132227685 22.04809522864095 37.63900562309595 20.277559016035422 49 18.1006774628344 20.61662133335098 41.28927508608918 19.993426117725438 50 18.92329514746012 20.09181375176756 40.0014118404885 20.983479260283826 51 18.804171106243203 20.466613281448197 38.00630475018144 22.722910862127158 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 84.0 1 508.0 2 932.0 3 21926.0 4 42920.0 5 29169.0 6 15418.0 7 14705.0 8 13992.0 9 13588.0 10 13184.0 11 12404.0 12 11624.0 13 10596.0 14 9568.0 15 8744.5 16 7921.0 17 7125.5 18 6330.0 19 5843.0 20 5356.0 21 4857.0 22 4358.0 23 4213.5 24 4069.0 25 3986.0 26 4040.5 27 4178.0 28 4605.0 29 5032.0 30 5480.0 31 5928.0 32 6515.0 33 7102.0 34 7878.5 35 8655.0 36 9244.0 37 9833.0 38 10351.5 39 10870.0 40 12328.0 41 13786.0 42 14878.5 43 15971.0 44 18043.5 45 20116.0 46 33572.5 47 47029.0 48 39499.0 49 31969.0 50 29803.0 51 27637.0 52 23857.0 53 20077.0 54 18325.0 55 16573.0 56 15388.0 57 14203.0 58 13698.5 59 13194.0 60 12358.5 61 11523.0 62 9996.0 63 8469.0 64 7551.5 65 6634.0 66 5651.0 67 4668.0 68 4048.5 69 3429.0 70 2987.0 71 2545.0 72 2113.5 73 1682.0 74 1362.0 75 865.0 76 688.0 77 546.5 78 405.0 79 316.5 80 228.0 81 168.0 82 108.0 83 76.0 84 44.0 85 30.5 86 17.0 87 13.0 88 9.0 89 6.0 90 3.0 91 2.5 92 2.0 93 1.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.5 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 453309.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 42.97976394364743 #Duplication Level Percentage of deduplicated Percentage of total 1 81.14724350632937 34.87689370579714 2 6.652382649086933 5.718356718411446 3 2.712308900778688 3.4972318889316547 4 1.745418294348569 3.0007066509610087 5 1.2957190515302501 2.7844849486028442 6 0.9896668405508353 2.5521388313838154 7 0.7876077050567047 2.369583527047454 8 0.6957381209736289 2.3922128164834704 9 0.5848621711117713 2.2623514248557752 >10 3.281349097559377 22.138115664921347 >50 0.06777449992646895 1.9579870886383726 >100 0.03309917438269396 2.990836003807535 >500 0.0021015348814408864 0.6085544001707291 >1k 0.0031523023221613294 2.6033483041069894 >5k 0.0010507674407204432 3.5192283215810067 >10k+ 5.253837203602216E-4 6.727969704299397 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 29795 6.572779274181628 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCAGATGGGTTCGTATGCCG 8972 1.979223884811464 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCAGATGGGTTCGTATGC 6613 1.4588283047545936 No Hit GAATCTGTCTCTTATACACATCTGACGCAGATGGGTTCGTATGCCGTCTTC 4162 0.9181375176755812 No Hit GCTGTCTCTTATACACATCTGACGCAGATGGGTTCGTATGCCGTCTTCTGC 1924 0.4244345468543532 No Hit GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCAGATGGGTT 1804 0.39796253769503803 No Hit GAACTGTCTCTTATACACATCTGACGCAGATGGGTTCGTATGCCGTCTTCT 1445 0.31876711029342014 No Hit GAATGATACGGCGACTGTCTCTTATACACATCTGACGCAGATGGGTTCGTA 1192 0.2629552909825307 No Hit GAATGATCTGTCTCTTATACACATCTGACGCAGATGGGTTCGTATGCCGTC 1002 0.22104127648028166 No Hit GAATGATACCTGTCTCTTCTACACATCTGACGCAGATGGGTTCGTATGCCG 735 0.1621410561008054 No Hit GAATGACTGTCTCTTATACACATCTGACGCAGATGGGTTCGTATGCCGTCT 714 0.15750845449792525 No Hit CTGTCTCTTATACACATCTGACGCAGATGGGTTCGTATGCCGTCTTCTGCT 660 0.1455960503762334 Illumina Single End Adapter 1 (95% over 21bp) GAATGATACGGCGACCTGTCTCTTATACACATCTGACGCAGATGGGTTCGT 586 0.12927164472798908 No Hit GAATCTTTCTCTTATACACATCTGACGCAGATGGGTTCGTATGCCGTCTTC 489 0.10787343732420931 No Hit CCTGTCTCTTATACACATCTGACGCAGATGGGTTCGTATGCCGTCTTCTGC 489 0.10787343732420931 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTA 486 0.10721163709522642 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.1780242615963945 0.0 2 0.0 0.0 0.0 0.9106371150804419 0.0 3 0.0 0.0 0.0 1.1113831845385818 0.0 4 0.0 0.0 0.0 1.7449466037515249 0.0 5 0.0 0.0 0.0 3.074723863854457 0.0 6 0.0 0.0 0.0 3.379813769415564 0.0 7 0.0 0.0 0.0 3.747995296806373 0.0 8 0.0 0.0 0.0 4.252728271443982 0.0 9 0.0 0.0 0.0 4.417516528460719 0.0 10 0.0 0.0 0.0 7.154942875610235 0.0 11 0.0 0.0 0.0 7.925498942222634 0.0 12 0.0 0.0 0.0 10.141426708933642 0.0 13 0.0 0.0 0.0 10.389822394878548 0.0 14 2.206000763276264E-4 0.0 0.0 10.566964256169632 0.0 15 2.206000763276264E-4 0.0 0.0 11.068829429814983 0.0 16 2.206000763276264E-4 0.0 0.0 11.42311315239715 0.0 17 2.206000763276264E-4 0.0 0.0 11.75776346818616 0.0 18 2.206000763276264E-4 0.0 0.0 12.057338371839077 0.0 19 2.206000763276264E-4 0.0 0.0 12.82193823639063 0.0 20 2.206000763276264E-4 0.0 0.0 13.138278745844445 0.0 21 2.206000763276264E-4 0.0 0.0 13.473590861862439 0.0 22 2.206000763276264E-4 0.0 0.0 13.953616627951353 0.0 23 2.206000763276264E-4 0.0 0.0 14.303708949083296 0.0 24 2.206000763276264E-4 0.0 0.0 14.581003245027123 0.0 25 2.206000763276264E-4 0.0 0.0 14.825869329750788 0.0 26 2.206000763276264E-4 0.0 0.0 15.041836804475535 0.0 27 2.206000763276264E-4 0.0 0.0 15.2635398811848 0.0 28 2.206000763276264E-4 0.0 0.0 15.474654154230338 0.0 29 2.206000763276264E-4 0.0 0.0 15.693930630099999 0.0 30 4.412001526552528E-4 0.0 0.0 15.957106521158856 0.0 31 4.412001526552528E-4 0.0 0.0 16.191604402295123 0.0 32 4.412001526552528E-4 0.0 0.0 16.42610228343139 0.0 33 6.618002289828792E-4 0.0 0.0 16.659497164186018 0.0 34 6.618002289828792E-4 0.0 0.0 16.90193664807008 0.0 35 6.618002289828792E-4 0.0 0.0 17.149449933709676 0.0 36 6.618002289828792E-4 0.0 0.0 17.389462816754136 0.0 37 6.618002289828792E-4 0.0 0.0 17.614474894608314 0.0 38 6.618002289828792E-4 0.0 0.0 17.825147967501195 0.0 39 6.618002289828792E-4 0.0 0.0 18.10376586390299 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ACGCCAA 20 7.0287596E-4 45.000004 44 CGCATGT 20 7.0287596E-4 45.000004 38 GAGTAGA 20 7.0287596E-4 45.000004 9 CGCGCAT 20 7.0287596E-4 45.000004 36 ATCCGTC 20 7.0287596E-4 45.000004 6 TACGCGC 20 7.0287596E-4 45.000004 34 GTACTAT 20 7.0287596E-4 45.000004 40 GCGATCG 20 7.0287596E-4 45.000004 9 TTACACG 40 6.7993824E-9 45.000004 34 TGGCTAA 20 7.0287596E-4 45.000004 43 GACTAGT 20 7.0287596E-4 45.000004 3 GCGAGAC 25 3.887055E-5 45.0 21 ACCGCTC 25 3.887055E-5 45.0 30 CGAGACA 25 3.887055E-5 45.0 22 ACGAGTG 25 3.887055E-5 45.0 30 TGCGTTA 25 3.887055E-5 45.0 30 CGACCAA 30 2.162582E-6 44.999996 29 GTCAAGC 30 2.162582E-6 44.999996 16 CGTTTTT 13265 0.0 44.03317 1 TGATACC 1100 0.0 42.545456 4 >>END_MODULE