##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2933292.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 563646 Sequences flagged as poor quality 0 Sequence length 51 %GC 36 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 29.516448267174788 31.0 28.0 33.0 25.0 34.0 2 28.84706358246133 31.0 28.0 33.0 16.0 34.0 3 28.81461945973182 31.0 28.0 34.0 16.0 34.0 4 33.252028755637404 35.0 32.0 37.0 28.0 37.0 5 34.30725845654897 35.0 33.0 37.0 30.0 37.0 6 33.88147880052373 35.0 33.0 37.0 28.0 37.0 7 33.760706187926466 35.0 33.0 37.0 29.0 37.0 8 33.70485907821576 35.0 33.0 37.0 28.0 37.0 9 34.861343822186264 37.0 34.0 39.0 28.0 39.0 10 34.60955457858301 37.0 33.0 39.0 27.0 39.0 11 34.805438165089434 37.0 34.0 39.0 27.0 39.0 12 34.957844107826546 37.0 34.0 39.0 27.0 39.0 13 35.0854916028855 37.0 34.0 39.0 27.0 39.0 14 35.97264772570017 38.0 34.0 40.0 27.0 41.0 15 36.23753739048978 38.0 34.0 40.0 27.0 41.0 16 36.2315886212268 38.0 34.0 41.0 30.0 41.0 17 35.46386739194459 38.0 33.0 40.0 27.0 41.0 18 35.2009967248947 37.0 33.0 39.0 27.0 40.0 19 34.57957122023398 37.0 33.0 37.0 27.0 40.0 20 33.73368923047445 35.0 32.0 37.0 27.0 39.0 21 33.89625225762269 35.0 33.0 38.0 27.0 40.0 22 34.343359129666496 35.0 33.0 38.0 28.0 40.0 23 34.6972958204263 35.0 33.0 38.0 29.0 40.0 24 34.204796982503204 35.0 33.0 38.0 27.0 40.0 25 33.37868271929545 35.0 33.0 38.0 24.0 40.0 26 33.17282478718912 35.0 32.0 38.0 23.0 40.0 27 34.076397242240695 35.0 33.0 38.0 25.0 40.0 28 33.827010215631795 35.0 33.0 38.0 24.0 40.0 29 33.875400517345994 35.0 33.0 39.0 24.0 40.0 30 33.13259918459459 35.0 33.0 38.0 21.0 40.0 31 32.93972103057593 35.0 33.0 38.0 21.0 40.0 32 32.20341136103157 35.0 31.0 38.0 16.0 40.0 33 31.38091461662107 35.0 30.0 39.0 12.0 40.0 34 30.646350723681177 35.0 25.0 39.0 8.0 40.0 35 30.008705818900516 35.0 23.0 39.0 7.0 40.0 36 29.328793249663796 35.0 20.0 39.0 7.0 40.0 37 29.24474758979927 35.0 18.0 39.0 7.0 40.0 38 28.974743012458173 35.0 18.0 39.0 7.0 40.0 39 28.610074408405275 35.0 18.0 39.0 7.0 40.0 40 28.42834687019867 35.0 18.0 38.0 7.0 40.0 41 28.063089243958085 34.0 18.0 38.0 7.0 40.0 42 28.21567969966965 34.0 17.0 39.0 7.0 40.0 43 28.054048108209763 34.0 17.0 38.0 7.0 40.0 44 28.054885513247676 34.0 15.0 39.0 7.0 40.0 45 28.17879129808426 35.0 17.0 39.0 7.0 40.0 46 27.94558464000454 34.0 15.0 38.0 7.0 40.0 47 27.832982049016582 34.0 15.0 38.0 7.0 40.0 48 27.652785613665316 34.0 15.0 38.0 7.0 40.0 49 27.789594887571276 34.0 15.0 38.0 7.0 40.0 50 27.795240274924332 34.0 15.0 38.0 7.0 40.0 51 26.67146045567608 33.0 15.0 37.0 7.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 2.0 8 6.0 9 21.0 10 25.0 11 32.0 12 48.0 13 84.0 14 117.0 15 192.0 16 356.0 17 646.0 18 1234.0 19 2354.0 20 3709.0 21 5713.0 22 8262.0 23 12213.0 24 17937.0 25 25829.0 26 33193.0 27 34256.0 28 30104.0 29 26940.0 30 26664.0 31 28905.0 32 32475.0 33 37637.0 34 41323.0 35 47301.0 36 50645.0 37 51386.0 38 38654.0 39 5383.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 23.75728737540939 2.3993783332091416 29.953552407007233 43.88978188437424 2 42.87850885130028 14.035760033780068 30.04367989837593 13.042051216543719 3 10.873846350368849 14.284852549295124 61.28101680842231 13.56028429191372 4 9.421516341817382 2.4813446737846094 72.67593489530663 15.42120408909138 5 17.93856427615915 2.9218694002973495 63.06138959559724 16.078176727946264 6 12.333273011783993 11.532770568761244 65.85889015445865 10.275066264996115 7 48.78381111548738 1.0229825102990175 47.88342328340838 2.3097830908052215 8 48.2013533317011 8.36588922834545 40.570677340032574 2.8620800999208726 9 45.43472321279668 2.13786667518265 39.70311152744808 12.724298584572585 10 29.157485372024283 13.297885552279268 45.41751382960227 12.12711524609418 11 23.417357703239265 14.32778729912037 49.84138980849682 12.41346518914354 12 19.152446748491077 13.133598038485147 52.55585952885322 15.158095684170561 13 16.497411495867976 14.19295089471051 57.89289731498138 11.416740294440126 14 14.890551871209945 18.084932741472485 52.67455104799821 14.34996433931936 15 13.604283539668515 13.2576120472779 60.15087483988177 12.987229573171813 16 15.63179726282099 15.557282407752385 51.42820138881496 17.38271894061166 17 15.757585434829663 15.425816913452769 55.73374068120771 13.082856970509859 18 16.19420700226738 15.45455835755066 54.08004314764941 14.271191492532548 19 14.601540683336706 20.0478669235655 49.78781007937606 15.562782313721732 20 16.2662380288337 19.360556093718397 54.24113716765488 10.132068709793026 21 16.925871912512463 22.01949450541652 50.77584157432147 10.278792007749544 22 14.764231450236496 14.56960574545016 53.63100243770026 17.035160366613088 23 14.384737938351378 19.451038417730278 54.685565053242634 11.478658590675709 24 16.709246583848728 15.303577067875937 52.82606458663771 15.161111761637624 25 14.297094275484968 21.23087895594043 51.0781589863141 13.393867782260497 26 13.021293506917461 13.746748845906827 55.97449462960794 17.257463017567765 27 15.519847563896489 15.42670399506073 51.00967628617963 18.04377215486316 28 11.039553194735703 17.40400889920269 55.19936272057284 16.357075185488764 29 16.35459135698648 14.302949014097502 53.655485890079945 15.686973738836077 30 16.422719224477774 17.560135262203584 50.015967468943266 16.00117804437537 31 15.688393069408813 15.36123737239331 47.8259403952126 21.12442916298528 32 17.687165348463395 18.172221571695708 49.685263445495934 14.45534963434496 33 15.292577255937237 16.743133101272782 44.36578987520536 23.59849976758462 34 16.431767456878962 18.163528171937706 47.51546183242674 17.889242538756594 35 18.174173151233223 20.761790201651394 44.063472463212726 17.00056418390266 36 15.389269151204834 22.246055148089404 42.082619232638926 20.282056468066838 37 17.74003541229779 22.57374309406968 43.125117538313056 16.561103955319474 38 18.00225673561065 21.84491684497007 37.28741089265248 22.8654155267668 39 19.201236236928853 20.635469780677944 38.84299720037044 21.32029678202276 40 17.97564428737186 21.13294514642169 41.70259347178903 19.188817094417416 41 16.623022251555053 22.884221656855544 40.75554514713136 19.73721094445805 42 17.277511061907653 21.569744130181 43.578593656302004 17.574151151609342 43 19.741646352497845 19.38770079092196 39.712337176170855 21.158315680409334 44 20.627486046206307 20.367038886109366 38.31340948041856 20.692065587265766 45 17.70792305808965 19.8436607374132 39.874495694105875 22.573920510391275 46 22.18484651714019 22.258474290600837 37.344184115561895 18.212495076697074 47 18.606536726952733 20.255798852471234 42.699850615457215 18.437813805118815 48 20.78751556828222 21.216863066534668 35.62342321244185 22.37219815274126 49 18.18517296317192 19.502311734670343 40.81018937418167 21.50232592797607 50 19.024174747980116 18.74474404147284 40.27102117286382 21.960060037683228 51 19.481731441365678 18.713696185194255 38.29016794229002 23.514404431150048 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 75.0 1 970.5 2 1866.0 3 22489.5 4 43113.0 5 31961.0 6 20809.0 7 19831.0 8 18853.0 9 18345.0 10 17837.0 11 17165.0 12 16493.0 13 15853.0 14 15213.0 15 14375.0 16 13537.0 17 12628.0 18 11719.0 19 10688.5 20 9658.0 21 8840.5 22 8023.0 23 7419.0 24 6815.0 25 6637.5 26 6306.5 27 6153.0 28 6236.5 29 6320.0 30 6751.0 31 7182.0 32 7595.0 33 8008.0 34 8732.0 35 9456.0 36 10179.0 37 10902.0 38 12087.0 39 13272.0 40 14761.5 41 16251.0 42 17898.5 43 19546.0 44 21346.0 45 23146.0 46 48666.5 47 74187.0 48 52555.0 49 30923.0 50 28478.5 51 26034.0 52 23617.0 53 21200.0 54 20628.0 55 20056.0 56 19096.0 57 18136.0 58 17534.5 59 16933.0 60 15492.5 61 14052.0 62 12356.0 63 10660.0 64 9044.0 65 7428.0 66 6098.5 67 4769.0 68 3919.5 69 3070.0 70 2529.0 71 1988.0 72 1657.0 73 1326.0 74 1139.5 75 779.0 76 605.0 77 482.0 78 359.0 79 243.0 80 127.0 81 104.5 82 82.0 83 56.5 84 31.0 85 19.5 86 8.0 87 8.0 88 8.0 89 5.0 90 2.0 91 1.0 92 0.0 93 1.0 94 2.0 95 1.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 563646.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 58.06389213640759 #Duplication Level Percentage of deduplicated Percentage of total 1 83.11066621895625 48.2572875872245 2 9.540934618846219 11.079675971784079 3 3.57285071716435 6.22360855982752 4 1.5354321247655118 3.566126611006392 5 0.7193906133865794 2.088530948981122 6 0.3937412182667057 1.371728857625743 7 0.216006392398972 0.877952030831991 8 0.15327162785839796 0.7119637814033299 9 0.10192251392359866 0.53262160692582 >10 0.5601205206332338 6.025240341632932 >50 0.05139200743435135 2.0933079695229195 >100 0.039317980059155884 3.812355011571802 >500 0.0015479519708329033 0.5971634924764947 >1k 0.002167132759166065 2.685258353586357 >5k 3.095903941665807E-4 1.3199793874939496 >10k+ 9.28771182499742E-4 8.757199488105032 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 19831 3.518343073489389 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCTGCTCCTTTCGTATGCCG 14447 2.563133598038485 No Hit GAATCTGTCTCTTATACACATCTGACGCTGCTCCTTTCGTATGCCGTCTTC 14438 2.561536851144158 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCTGCTCCTTTCGTATGC 7343 1.302768049449477 No Hit GAACTGTCTCTTATACACATCTGACGCTGCTCCTTTCGTATGCCGTCTTCT 3416 0.6060541545580027 No Hit GAATGATCTGTCTCTTATACACATCTGACGCTGCTCCTTTCGTATGCCGTC 2389 0.42384759228309965 No Hit GCTGTCTCTTATACACATCTGACGCTGCTCCTTTCGTATGCCGTCTTCTGC 2126 0.37718709970442443 TruSeq Adapter, Index 19 (95% over 21bp) GAATGCTGTCTCTTATACACATCTGACGCTGCTCCTTTCGTATGCCGTCTT 1957 0.34720374135538973 No Hit GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCTGCTCCTTT 1932 0.3427683333155917 No Hit GAATGACTGTCTCTTATACACATCTGACGCTGCTCCTTTCGTATGCCGTCT 1787 0.3170429666847631 No Hit GAATGATACGGCGACTGTCTCTTATACACATCTGACGCTGCTCCTTTCGTA 1331 0.23614112403884707 No Hit GAATGATACGGCGACCTGTCTCTTATACACATCTGACGCTGCTCCTTTCGT 831 0.1474329632428865 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTA 688 0.12206242925524176 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAAA 642 0.11390127846201338 No Hit CTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 629 0.11159486628131841 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.04435408039798029 0.0 2 0.0 0.0 0.0 0.4811530641572902 0.0 3 0.0 0.0 0.0 0.5810384532135419 0.0 4 0.0 0.0 0.0 1.3183806857495661 0.0 5 0.0 0.0 0.0 4.380586396426126 0.0 6 0.0 0.0 0.0 4.942109054264556 0.0 7 0.0 0.0 0.0 5.453955142057248 0.0 8 0.0 0.0 0.0 6.1174921848110335 0.0 9 0.0 0.0 0.0 6.335359427725913 0.0 10 0.0 0.0 0.0 9.705382456364456 0.0 11 0.0 0.0 0.0 9.987651824017203 0.0 12 0.0 0.0 0.0 11.691735592907605 0.0 13 0.0 0.0 0.0 11.88157105701096 0.0 14 0.0 0.0 0.0 12.023326697962906 0.0 15 0.0 0.0 0.0 12.363788619097802 0.0 16 0.0 0.0 0.0 12.600284575779833 0.0 17 0.0 0.0 0.0 12.733701649616957 0.0 18 0.0 0.0 0.0 12.834296703959577 0.0 19 0.0 0.0 0.0 13.3433041306068 0.0 20 0.0 0.0 0.0 13.450818421491503 0.0 21 0.0 0.0 0.0 13.534204092639706 0.0 22 0.0 0.0 0.0 13.710733332623668 0.0 23 0.0 0.0 0.0 13.815586378684493 0.0 24 0.0 0.0 0.0 13.910858943379354 0.0 25 0.0 0.0 0.0 13.984131884196819 0.0 26 0.0 0.0 0.0 14.085259187504214 0.0 27 0.0 0.0 0.0 14.219208510306114 0.0 28 0.0 0.0 0.0 14.30472317731342 0.0 29 0.0 0.0 0.0 14.394673252360525 0.0 30 0.0 0.0 0.0 14.491365147628121 0.0 31 0.0 0.0 0.0 14.58362163485592 0.0 32 0.0 0.0 0.0 14.703377651930467 0.0 33 0.0 0.0 0.0 14.804150122594677 0.0 34 0.0 0.0 0.0 14.935083367929517 0.0 35 0.0 0.0 0.0 15.05554905029043 0.0 36 0.0 0.0 0.0 15.185062965052532 0.0 37 0.0 0.0 0.0 15.32699602232607 0.0 38 0.0 0.0 0.0 15.50334784598844 0.0 39 0.0 0.0 0.0 15.732924566128386 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TCTATTG 25 3.888266E-5 45.000004 1 CCGATGA 365 0.0 44.999996 18 CGTTTTT 17915 0.0 44.334354 1 TACGGCT 895 0.0 43.49162 7 TGATACC 1725 0.0 42.52174 4 GATACCT 1745 0.0 42.163326 5 CGATGAA 390 0.0 42.115383 19 ACGGCTG 925 0.0 41.837837 8 TACCTGT 1780 0.0 41.71348 7 ATACCTG 1780 0.0 41.71348 6 CGACCAC 1080 0.0 41.250004 12 ATGATCT 345 0.0 41.086956 3 ATGATAC 4350 0.0 41.01724 3 GCGACCA 1110 0.0 40.743244 11 GAATCTG 1730 0.0 40.70809 1 AATGATA 4300 0.0 40.604652 2 GAATGAT 4610 0.0 40.55857 1 CGGCTGT 960 0.0 40.54688 9 AATGATC 390 0.0 40.384617 2 ATACGGC 2620 0.0 40.276722 6 >>END_MODULE