##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2933289.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 214854 Sequences flagged as poor quality 0 Sequence length 51 %GC 38 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 28.095264691371817 31.0 25.0 31.0 16.0 33.0 2 28.111773576475187 31.0 28.0 33.0 16.0 34.0 3 28.322944883502284 31.0 28.0 33.0 16.0 34.0 4 31.61026092136986 35.0 28.0 35.0 19.0 37.0 5 33.45745948411479 35.0 33.0 37.0 28.0 37.0 6 32.110819440177984 35.0 32.0 37.0 17.0 37.0 7 31.818607054092546 33.0 31.0 35.0 25.0 37.0 8 32.383707075502436 35.0 32.0 35.0 25.0 37.0 9 32.64534521116665 34.0 31.0 37.0 25.0 39.0 10 30.773450808455976 34.0 27.0 38.0 15.0 39.0 11 31.7176594338481 35.0 27.0 39.0 15.0 39.0 12 32.68849544341739 35.0 31.0 39.0 22.0 39.0 13 32.89794930510951 35.0 31.0 39.0 23.0 39.0 14 33.07676375585281 36.0 31.0 39.0 18.0 41.0 15 33.628626881510236 36.0 31.0 39.0 23.0 41.0 16 33.802698576707904 36.0 32.0 39.0 24.0 41.0 17 31.74264384186471 34.0 27.0 39.0 17.0 41.0 18 32.50373742169101 35.0 29.0 39.0 20.0 39.0 19 32.41645489495192 35.0 30.0 37.0 18.0 39.0 20 32.05100207582824 34.0 30.0 37.0 23.0 39.0 21 32.66395785044728 35.0 31.0 37.0 23.0 39.0 22 33.16230091131652 35.0 31.0 38.0 25.0 39.0 23 34.01534995857652 35.0 32.0 38.0 27.0 40.0 24 32.446791774879685 35.0 31.0 37.0 22.0 39.0 25 31.562828711590196 35.0 30.0 37.0 18.0 39.0 26 31.14066761614864 33.0 27.0 37.0 20.0 39.0 27 32.59967233563257 35.0 31.0 38.0 23.0 39.0 28 32.61081478585458 35.0 31.0 38.0 22.0 39.0 29 32.91987116832826 35.0 31.0 38.0 22.0 40.0 30 31.90624330941011 35.0 30.0 38.0 19.0 40.0 31 32.21022647937669 35.0 30.0 37.0 21.0 40.0 32 32.17356437394696 35.0 30.0 38.0 20.0 40.0 33 32.33188583875562 35.0 31.0 38.0 18.0 40.0 34 31.672382175803104 35.0 30.0 38.0 15.0 40.0 35 31.236155715043704 35.0 30.0 38.0 14.0 40.0 36 30.43244715015778 35.0 27.0 38.0 10.0 40.0 37 30.44769936794288 35.0 27.0 38.0 9.0 40.0 38 30.401542442775092 35.0 26.0 38.0 10.0 40.0 39 29.813245273534587 35.0 25.0 38.0 8.0 40.0 40 29.58388021633295 34.0 24.0 38.0 8.0 40.0 41 29.053478175877572 33.0 23.0 37.0 8.0 40.0 42 29.643651037448684 34.0 24.0 38.0 8.0 40.0 43 29.428025542926825 34.0 23.0 38.0 8.0 40.0 44 29.47165982481127 34.0 23.0 38.0 7.0 40.0 45 29.706735736825937 35.0 24.0 38.0 7.0 40.0 46 29.26357433419904 34.0 23.0 38.0 7.0 40.0 47 29.27239893136735 34.0 23.0 38.0 7.0 40.0 48 29.067664553603844 34.0 23.0 38.0 7.0 40.0 49 28.984026362087743 34.0 23.0 37.0 7.0 40.0 50 29.02620384074767 34.0 23.0 38.0 7.0 40.0 51 27.295824141044616 32.0 20.0 36.0 7.0 39.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 3.0 9 9.0 10 14.0 11 13.0 12 15.0 13 28.0 14 52.0 15 113.0 16 267.0 17 447.0 18 784.0 19 1201.0 20 1724.0 21 2439.0 22 3206.0 23 4367.0 24 5831.0 25 8014.0 26 10826.0 27 12258.0 28 12383.0 29 12742.0 30 13924.0 31 16158.0 32 18103.0 33 19868.0 34 21804.0 35 22527.0 36 16012.0 37 8139.0 38 1557.0 39 25.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 27.75652303424651 2.57430627309708 35.517607305426004 34.1515633872304 2 35.786627198004226 15.85402180085081 35.31002448174109 13.049326519403875 3 13.261563666489803 15.698567399257172 57.664274344438546 13.37559458981448 4 11.639531961238795 2.8107459018682452 69.33219767842348 16.217524458469473 5 22.110828748824783 3.6801735131763893 57.438074227149606 16.77092351084923 6 13.998343060869242 14.065830750183848 59.790834706358744 12.144991482588177 7 53.810029136064486 1.1565993651502882 42.02528228471427 3.0080892140709503 8 54.302921984231155 11.020041516564737 30.606365252683215 4.070671246520893 9 50.56782745492288 2.6031630781833246 30.275908291211707 16.55310117568209 10 32.47414523350741 16.11326761428691 36.535042400886184 14.877544751319501 11 24.77915235462221 17.04227056512795 43.637074478483065 14.541502601766782 12 20.169510458264682 14.532193954964768 46.626080966609884 18.67221462016067 13 17.80651046757333 15.978292235657701 53.497258603516805 12.717938693252162 14 15.181472069405272 20.405950087035848 44.979846779673636 19.432731063885242 15 11.677231980786953 16.14445158107366 55.52328557997524 16.65503085816415 16 12.981373397749168 15.75116125368855 45.79993856293111 25.467526785631172 17 14.103996202072105 17.07066193787409 50.36815698101967 18.457184879034134 18 13.75631824401687 15.926163813566422 48.94765747903227 21.369860463384438 19 15.071630037141501 19.55467433699163 45.0222011226228 20.351494503244062 20 17.778584527167286 17.175384214396754 51.26132164167295 13.78470961676301 21 17.894477179852363 22.812235285356568 44.303108157167195 14.990179377623875 22 14.918037364908262 15.695774805216567 47.804555651744906 21.581632178130263 23 15.61432414569894 23.397283736863173 44.79181211427295 16.19658000316494 24 16.94173717966619 16.920327292021557 44.50882925149171 21.62910627682054 25 13.663697208336826 24.330010146425014 43.20096437580869 18.805328269429474 26 14.326938292980348 18.392489783760134 47.571839481694546 19.70873244156497 27 16.796522289554765 19.567241010174353 43.92517709700541 19.711059603265475 28 13.73304662701183 19.73479665261061 49.38190585234624 17.150250868031314 29 18.35572062889218 19.11996053133756 44.2435328176343 18.28078602213596 30 17.157232353132827 21.970268182114367 45.6025952507284 15.269904214024407 31 20.21838085397526 18.133709402664135 40.96176938758413 20.68614035577648 32 20.66659219749225 23.878075344187216 40.8160890651326 14.63924339318793 33 16.891935919275415 17.5942733204874 42.32176268535843 23.192028074878753 34 18.81603321325179 23.877144479507013 38.72769415510067 18.579128152140523 35 21.62910627682054 20.20674504547274 38.9422584638871 19.221890213819616 36 21.54812104964301 22.176454708778984 38.97111526897335 17.30430897260465 37 20.23234382417828 24.427750937846167 38.864996695430385 16.47490854254517 38 21.081757844862093 20.809014493563073 40.41349009094548 17.69573757062936 39 17.50444487884796 24.26159159243021 37.58924665121432 20.644716877507516 40 21.942342241708324 19.613318811844323 40.923138503355766 17.52120044309159 41 17.363418879797443 20.528824224822436 40.44048516667132 21.667271728708798 42 19.924693047371704 21.052435607435747 41.144684297243714 17.878187047948842 43 19.057592597764064 20.707550243421114 39.57664274344438 20.658214415370438 44 21.687285319333128 20.805756467182366 37.35932307520456 20.14763513827995 45 18.540031835572062 21.138540590354378 36.645815297830154 23.675612276243402 46 21.441537043759947 26.314613644614482 33.647965595241416 18.595883716384147 47 16.15701825425638 21.394062945069674 43.00129390190548 19.447624898768463 48 20.431083433401287 23.075669989853576 32.74781944948663 23.745427127258512 49 18.262168728531933 20.40129576363484 38.5512952982025 22.785240209630725 50 18.877004849804983 19.881407839742337 37.481266348310946 23.760320962141734 51 18.825807292393904 20.33380807432024 34.98422184367059 25.856162789615272 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 30.0 1 203.0 2 376.0 3 8263.5 4 16151.0 5 11341.5 6 6532.0 7 6577.5 8 6623.0 9 6409.5 10 6196.0 11 5516.0 12 4836.0 13 4318.0 14 3800.0 15 3314.0 16 2828.0 17 2554.0 18 2280.0 19 2090.0 20 1900.0 21 1757.0 22 1614.0 23 1635.5 24 1657.0 25 1615.5 26 1621.5 27 1669.0 28 1911.0 29 2153.0 30 2379.5 31 2606.0 32 2903.0 33 3200.0 34 3445.5 35 3691.0 36 3985.5 37 4280.0 38 4484.5 39 4689.0 40 5504.5 41 6320.0 42 6914.0 43 7508.0 44 8530.0 45 9552.0 46 18824.5 47 28097.0 48 23086.0 49 18075.0 50 16606.5 51 15138.0 52 12776.0 53 10414.0 54 9586.5 55 8759.0 56 8369.0 57 7979.0 58 7203.5 59 6428.0 60 5713.5 61 4999.0 62 4494.5 63 3990.0 64 3488.5 65 2987.0 66 2470.0 67 1953.0 68 1693.0 69 1433.0 70 1160.5 71 888.0 72 779.0 73 670.0 74 564.0 75 322.0 76 186.0 77 170.5 78 155.0 79 123.5 80 92.0 81 71.5 82 51.0 83 32.5 84 14.0 85 15.0 86 16.0 87 10.0 88 4.0 89 3.0 90 2.0 91 1.5 92 1.0 93 0.5 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 214854.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 43.889804239157755 #Duplication Level Percentage of deduplicated Percentage of total 1 80.47699339335517 35.32119485790351 2 6.815554777887359 5.982667299654649 3 3.0265432295146293 3.985031695942361 4 2.0148676019894167 3.5372857847654684 5 1.4602487831260142 3.2045016615934543 6 1.1230235739509433 2.957357088999972 7 0.8663930688554491 2.6618075530360152 8 0.7455010127360842 2.6175914807264467 9 0.5864325178421829 2.3164567566812813 >10 2.766731354521257 18.316624312323718 >50 0.06999013775331658 2.003220791793497 >100 0.03817643877453632 3.2570955160248354 >500 0.003181369897878026 1.0695635175514535 >1k 0.004241826530504035 4.854924739590605 >5k 0.0010604566326260089 2.649240879853296 >10k+ 0.0010604566326260089 5.26543606355944 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 11313 5.26543606355944 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCAGGATCGTTCGTATGCCG 5692 2.649240879853296 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCAGGATCGTTCGTATGC 4809 2.2382641235443606 No Hit GAATCTGTCTCTTATACACATCTGACGCAGGATCGTTCGTATGCCGTCTTC 3118 1.4512180364340437 No Hit GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCAGGATCGTT 1287 0.5990114217096261 No Hit GCTGTCTCTTATACACATCTGACGCAGGATCGTTCGTATGCCGTCTTCTGC 1217 0.5664311579025757 No Hit GAACTGTCTCTTATACACATCTGACGCAGGATCGTTCGTATGCCGTCTTCT 907 0.4221471324713526 No Hit GAATGATACGGCGACTGTCTCTTATACACATCTGACGCAGGATCGTTCGTA 737 0.3430236346542303 No Hit GAATGATCTGTCTCTTATACACATCTGACGCAGGATCGTTCGTATGCCGTC 654 0.3043927504258706 No Hit GAATGACTGTCTCTTATACACATCTGACGCAGGATCGTTCGTATGCCGTCT 440 0.2047902296443166 No Hit GAATGATACCTGTCTCTTCTACACATCTGACGCAGGATCGTTCGTATGCCG 433 0.20153220326361154 No Hit CTGTCTCTTATACACATCTGACGCAGGATCGTTCGTATGCCGTCTTCTGCT 350 0.16290131903525185 Illumina Single End Adapter 2 (95% over 21bp) GAATGATACGGCGACCTGTCTCTTATACACATCTGACGCAGGATCGTTCGT 344 0.16010872499464754 No Hit GAATCTTTCTCTTATACACATCTGACGCAGGATCGTTCGTATGCCGTCTTC 322 0.14986921351243168 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTA 288 0.13404451394900724 No Hit GAATGATACGGCTGCCTCCTATACACATCTGACGCAGGATCGTTCGTATGC 266 0.12380500246679141 No Hit CCTGTCTCTTATACACATCTGACGCAGGATCGTTCGTATGCCGTCTTCTGC 239 0.11123832928407197 No Hit GAATGACTCTCTCTTATACACATCTGACGCAGGATCGTTCGTATGCCGTCT 231 0.10751487056326622 No Hit GAATCTGTCTCTTATCCACATCTGACGCAGGATCGTTCGTATGCCGTCTTC 218 0.10146425014195687 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.1950161505022015 0.0 2 0.0 0.0 0.0 1.1123832928407198 0.0 3 0.0 0.0 0.0 1.3390488424697702 0.0 4 4.6543234010071956E-4 0.0 0.0 2.134007279361799 0.0 5 4.6543234010071956E-4 0.0 0.0 4.132108315414189 0.0 6 4.6543234010071956E-4 0.0 0.0 4.460703547525296 0.0 7 4.6543234010071956E-4 0.0 0.0 4.8954173531793685 0.0 8 4.6543234010071956E-4 0.0 0.0 5.493497910208793 0.0 9 4.6543234010071956E-4 0.0 0.0 5.676412819868376 0.0 10 4.6543234010071956E-4 0.0 0.0 9.847152019510924 0.0 11 4.6543234010071956E-4 0.0 0.0 10.592309196012176 0.0 12 4.6543234010071956E-4 0.0 0.0 13.716756495108307 0.0 13 4.6543234010071956E-4 0.0 0.0 14.017425786813371 0.0 14 4.6543234010071956E-4 0.0 0.0 14.197082670092248 0.0 15 4.6543234010071956E-4 0.0 0.0 14.789578039040464 0.0 16 4.6543234010071956E-4 0.0 0.0 15.157269587720034 0.0 17 4.6543234010071956E-4 0.0 0.0 15.50448211343517 0.0 18 4.6543234010071956E-4 0.0 0.0 15.843316857028494 0.0 19 4.6543234010071956E-4 0.0 0.0 16.89612481033632 0.0 20 4.6543234010071956E-4 0.0 0.0 17.232166959889042 0.0 21 4.6543234010071956E-4 0.0 0.0 17.60032394090871 0.0 22 4.6543234010071956E-4 0.0 0.0 18.152792128608265 0.0 23 4.6543234010071956E-4 0.0 0.0 18.508382436445213 0.0 24 4.6543234010071956E-4 0.0 0.0 18.766231952861013 0.0 25 4.6543234010071956E-4 0.0 0.0 18.989639476109357 0.0 26 4.6543234010071956E-4 0.0 0.0 19.216305025738407 0.0 27 9.308646802014391E-4 0.0 0.0 19.46391503067199 0.0 28 9.308646802014391E-4 0.0 0.0 19.66823982797621 0.0 29 9.308646802014391E-4 0.0 0.0 19.86930659889972 0.0 30 9.308646802014391E-4 0.0 0.0 20.098764742569372 0.0 31 9.308646802014391E-4 0.0 0.0 20.326361156878626 0.0 32 9.308646802014391E-4 0.0 0.0 20.53673657460415 0.0 33 9.308646802014391E-4 0.0 0.0 20.744319398289072 0.0 34 9.308646802014391E-4 0.0 0.0 20.9579528423953 0.0 35 9.308646802014391E-4 0.0 0.0 21.173913448202036 0.0 36 9.308646802014391E-4 0.0 0.0 21.389874054008768 0.0 37 9.308646802014391E-4 0.0 0.0 21.61095441555661 0.0 38 9.308646802014391E-4 0.0 0.0 21.834361938804957 0.0 39 9.308646802014391E-4 0.0 0.0 22.112225045845086 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CATTGGG 20 7.0204714E-4 45.000004 3 CCGTGCG 25 3.8801874E-5 45.000004 1 ACTTACA 20 7.0204714E-4 45.000004 28 AGACGAG 20 7.0204714E-4 45.000004 30 GCCGATG 20 7.0204714E-4 45.000004 9 CCCGTGT 25 3.8801874E-5 45.000004 18 CAAGGAT 20 7.0204714E-4 45.000004 35 ATTGGGC 20 7.0204714E-4 45.000004 4 CGTAACC 25 3.8801874E-5 45.000004 35 CCGGTGA 25 3.8801874E-5 45.000004 18 TGGGCGC 20 7.0204714E-4 45.000004 6 GTCGGGA 25 3.8801874E-5 45.000004 4 CCCGATG 20 7.0204714E-4 45.000004 17 CGTGCGG 30 2.1572396E-6 44.999996 2 CGTTTTT 5280 0.0 44.65909 1 TGATACC 715 0.0 43.74126 4 TACGGCT 645 0.0 43.255817 7 GGCGACT 120 0.0 43.124996 10 CCGATGA 105 0.0 42.857143 18 GATACCT 730 0.0 42.842464 5 >>END_MODULE