##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2933288.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 645361 Sequences flagged as poor quality 0 Sequence length 51 %GC 34 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 29.62962280026218 31.0 28.0 33.0 25.0 34.0 2 29.006780701033996 31.0 28.0 33.0 16.0 34.0 3 28.95013023718508 31.0 28.0 34.0 16.0 34.0 4 33.33315617150711 35.0 32.0 37.0 28.0 37.0 5 34.369154628184845 35.0 33.0 37.0 32.0 37.0 6 33.92704858211141 35.0 33.0 37.0 28.0 37.0 7 33.80499751301984 35.0 33.0 37.0 29.0 37.0 8 33.79623497546334 35.0 33.0 37.0 28.0 37.0 9 34.95364145028906 37.0 34.0 39.0 28.0 39.0 10 34.89534539583272 37.0 34.0 39.0 28.0 39.0 11 35.24143851270839 37.0 34.0 39.0 29.0 39.0 12 35.34569334062641 37.0 34.0 39.0 30.0 39.0 13 35.5528533642411 37.0 34.0 39.0 30.0 39.0 14 36.325154448440486 38.0 35.0 40.0 30.0 41.0 15 36.68443708250111 38.0 35.0 41.0 30.0 41.0 16 36.65008111739011 38.0 34.0 41.0 31.0 41.0 17 35.87683792482037 38.0 34.0 40.0 27.0 41.0 18 35.60832774214742 38.0 34.0 39.0 28.0 40.0 19 34.8609956288031 37.0 34.0 38.0 27.0 40.0 20 34.12858229734986 35.0 33.0 38.0 27.0 40.0 21 34.36307740938793 35.0 33.0 38.0 29.0 40.0 22 34.76995046183454 35.0 33.0 39.0 30.0 40.0 23 35.140671655089164 35.0 34.0 39.0 30.0 40.0 24 34.535565365741036 35.0 33.0 38.0 27.0 40.0 25 33.505050661567715 35.0 33.0 38.0 24.0 40.0 26 33.49441630343327 35.0 32.0 38.0 24.0 40.0 27 34.36962878141071 35.0 33.0 38.0 27.0 40.0 28 34.11418570381539 35.0 33.0 39.0 25.0 40.0 29 34.0032555422469 35.0 33.0 39.0 24.0 40.0 30 33.2419916914719 35.0 33.0 39.0 21.0 40.0 31 33.12365172360896 35.0 33.0 38.0 21.0 40.0 32 32.34680124767378 35.0 31.0 38.0 16.0 40.0 33 31.453164972782677 35.0 30.0 39.0 12.0 40.0 34 30.646188722281018 35.0 25.0 39.0 8.0 40.0 35 30.064272554430776 35.0 22.0 39.0 7.0 41.0 36 29.39745041922273 35.0 20.0 39.0 7.0 40.0 37 29.223194460154858 35.0 18.0 39.0 7.0 40.0 38 29.066203256781865 35.0 18.0 39.0 7.0 40.0 39 28.61227901902966 35.0 18.0 39.0 7.0 40.0 40 28.526167524842684 35.0 18.0 39.0 7.0 40.0 41 28.12445592466852 34.0 17.0 39.0 7.0 40.0 42 28.204028442995472 35.0 15.0 39.0 7.0 40.0 43 28.08431405058564 35.0 15.0 39.0 7.0 40.0 44 28.14479182968912 35.0 15.0 39.0 7.0 40.0 45 28.26322321925248 35.0 15.0 39.0 7.0 40.0 46 28.043949045572944 35.0 15.0 39.0 7.0 40.0 47 27.96195462694523 34.0 15.0 39.0 7.0 40.0 48 27.81951961770234 34.0 15.0 38.0 7.0 40.0 49 28.007721259884004 34.0 15.0 39.0 7.0 40.0 50 27.98390513216634 34.0 15.0 39.0 7.0 40.0 51 27.009049198820506 33.0 15.0 38.0 7.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 8.0 9 13.0 10 21.0 11 26.0 12 54.0 13 77.0 14 105.0 15 180.0 16 302.0 17 692.0 18 1408.0 19 2611.0 20 4136.0 21 6337.0 22 9332.0 23 13791.0 24 20192.0 25 29496.0 26 37789.0 27 38980.0 28 34393.0 29 30093.0 30 28725.0 31 29946.0 32 32968.0 33 38486.0 34 44890.0 35 53098.0 36 59557.0 37 64709.0 38 54092.0 39 8853.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 22.967610376208043 2.2170537110237523 31.14241486547839 43.67292104728981 2 42.38139583891806 13.733243874358692 30.822129009964964 13.06323127675828 3 10.455078630409957 14.020060090399017 62.07502467611151 13.449836603079518 4 9.326717914469576 2.391839606049947 73.31834430651992 14.96309817296056 5 18.211047770162747 2.83577718517233 63.508795852243935 15.444379192420987 6 12.356649998992813 11.820515959284803 65.63551252709723 10.187321514625147 7 49.16023744849782 0.831937473754999 47.815253788189864 2.1925712895573173 8 48.91308895331451 8.43156001059872 40.103600930332014 2.5517501057547634 9 46.07328301524263 2.4920935724346527 39.20611874594219 12.228504666380521 10 27.045018214611666 18.703330384079607 44.32759339346505 9.924058007843673 11 18.826672203619367 15.015936816758371 53.75534003449233 12.402050945129934 12 15.03623553329067 14.175476981100502 54.86464165017719 15.923645835431643 13 14.518695737734385 14.88190330683137 59.6066387649703 10.992762190463942 14 13.14365138271448 19.361256722981402 52.94292651709663 14.552165377207485 15 11.075506576939107 15.330334494957084 60.14695650961245 13.447202418491354 16 12.91292780319852 17.181391500261096 52.20008646323531 17.70559423330508 17 12.962977310373574 17.092758936471213 56.27052146008204 13.673742293073179 18 13.364458032016188 15.919926986601299 55.18663197807119 15.528983003311325 19 12.64981924845164 18.15898388653792 52.62682436651735 16.56437249849309 20 15.064746707656646 17.559784368748655 56.33839045123582 11.037078472358882 21 14.679226045577593 20.85406462429555 53.17148076812822 11.295228561998634 22 13.678855710214902 14.203523299362683 55.47437790631909 16.643243084103315 23 13.374684866299638 20.056061646117445 54.49244686307354 12.076806624509382 24 14.820232397061488 16.172498802995534 53.04271562737755 15.964553172565433 25 12.132124500860758 23.332367465651007 50.92622578680769 13.60928224668054 26 12.886276053247716 16.591179200478493 54.16968177500655 16.352862971267243 27 15.014697200481592 18.152940757188613 51.1070548111832 15.725307231146598 28 11.539432968524594 18.5832425572664 54.84341322143731 15.033911252771704 29 14.709596644358738 18.77026966302581 51.617621765182584 14.902511927432863 30 13.169993228596088 22.41024790776015 52.22906249370507 12.190696369938687 31 17.68219647608083 17.029693458389954 49.22376778268287 16.064342282846344 32 16.297854998985066 21.070377664593927 49.785004051995706 12.846763284425306 33 15.01330263217021 21.607131512440326 44.57706616916733 18.80249968622213 34 16.509364526210913 23.252567167833195 43.51750415658833 16.720564149367565 35 14.355531245303016 25.17459220498295 41.34135778269837 19.12851876701567 36 20.486518398229826 25.008328671859626 38.242626994813754 16.262525935096793 37 16.10974322898347 25.34116564217547 42.519458101744604 16.029633027096462 38 19.746777385060454 26.307291577892062 37.21126625253153 16.734664784515953 39 19.21312257790601 23.134028861365962 39.231530879616216 18.421317681111812 40 18.02758456119908 25.775806099221988 38.325526333323516 17.871083006255414 41 20.091080805936524 25.51796591365143 35.98482089869081 18.40613238172124 42 17.318679002914646 23.98440562723809 39.82856106892111 18.86835430092615 43 21.123526212460934 23.706266725135233 36.2538176307524 18.91638943165143 44 19.489711959662888 24.49419782106449 36.33485754484699 19.68123267442563 45 17.983578183373336 22.911207835614487 37.02284457846074 22.082369402551443 46 21.065109295417603 24.47746300132794 36.30448694606584 18.152940757188613 47 15.932168197334514 23.481121418864788 42.82006504886412 17.76664533493657 48 18.48500296733146 24.181659567280946 36.31207959576113 21.02125786962646 49 16.886672730456286 22.217642528755224 40.69117904552646 20.204505695262032 50 18.447349622924225 22.033559511653166 38.99476417075095 20.524326694671664 51 17.58488659835348 21.863267225630306 37.44415916053186 23.10768701548436 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 81.0 1 1035.0 2 1989.0 3 25693.5 4 49398.0 5 37127.5 6 24857.0 7 23770.5 8 22684.0 9 21982.5 10 21281.0 11 20515.5 12 19750.0 13 18687.5 14 17625.0 15 16465.5 16 15306.0 17 14361.0 18 13416.0 19 12315.0 20 11214.0 21 10346.0 22 9478.0 23 8981.0 24 8484.0 25 8286.0 26 8351.0 27 8614.0 28 9192.0 29 9770.0 30 10686.5 31 11603.0 32 12692.0 33 13781.0 34 14833.5 35 15886.0 36 17155.5 37 18425.0 38 19141.0 39 19857.0 40 20778.0 41 21699.0 42 22675.0 43 23651.0 44 25245.0 45 26839.0 46 55371.0 47 83903.0 48 59495.5 49 35088.0 50 32293.0 51 29498.0 52 26081.0 53 22664.0 54 21046.5 55 19429.0 56 18280.0 57 17131.0 58 15408.5 59 13686.0 60 12240.0 61 10794.0 62 9018.5 63 7243.0 64 6054.5 65 4866.0 66 3847.5 67 2829.0 68 2226.5 69 1624.0 70 1297.5 71 971.0 72 830.0 73 689.0 74 608.5 75 436.5 76 345.0 77 261.5 78 178.0 79 122.0 80 66.0 81 45.0 82 24.0 83 20.0 84 16.0 85 11.5 86 7.0 87 5.0 88 3.0 89 2.5 90 2.0 91 1.0 92 0.0 93 0.0 94 0.0 95 0.5 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 645361.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 50.67583405450018 #Duplication Level Percentage of deduplicated Percentage of total 1 80.41591584129249 40.7514360651399 2 7.442084406602367 7.542676688171299 3 3.864146371340946 5.874565208291183 4 2.5846797461621205 5.23923207602157 5 1.7449551700238246 4.421352931433473 6 1.1639967629339283 3.539190407904908 7 0.7659530423897664 2.7170716488778344 8 0.5438281528926023 2.2047156184120693 9 0.36655725857069654 1.671803532612102 >10 1.0248774243715684 7.845558934956733 >50 0.03979305572417383 1.4723938420039087 >100 0.03792775294139152 3.4419921469221073 >500 0.0018652993249863444 0.5967716153671019 >1k 0.0021761825458174017 2.6996511090102056 >5k 0.0 0.0 >10k+ 0.0012435328833242296 9.981588174875618 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 22303 3.4558952276322863 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCAAGTACCGTCGTATGCCG 14726 2.281823661485587 No Hit GAATCTGTCTCTTATACACATCTGACGCAAGTACCGTCGTATGCCGTCTTC 14575 2.258425904261336 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCAAGTACCGTCGTATGC 11754 1.8213062146612515 No Hit GAACTGTCTCTTATACACATCTGACGCAAGTACCGTCGTATGCCGTCTTCT 3351 0.5192442679368602 No Hit GAATGATCTGTCTCTTATACACATCTGACGCAAGTACCGTCGTATGCCGTC 2784 0.43138646431996974 No Hit GCTGTCTCTTATACACATCTGACGCAAGTACCGTCGTATGCCGTCTTCTGC 2569 0.3980717768814664 No Hit GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCAAGTACCGT 2504 0.38799989463261647 No Hit GAATGACTGTCTCTTATACACATCTGACGCAAGTACCGTCGTATGCCGTCT 2326 0.3604184324742276 No Hit GAATGATACGGCGACTGTCTCTTATACACATCTGACGCAAGTACCGTCGTA 1995 0.30912930902239216 No Hit GAATGCTGTCTCTTATACACATCTGACGCAAGTACCGTCGTATGCCGTCTT 1607 0.24900791959848828 No Hit GAATGATACGGCGACCTGTCTCTTATACACATCTGACGCAAGTACCGTCGT 905 0.1402315913109097 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 1.5495203459769028E-4 0.0 0.0 0.044161329860341735 0.0 2 1.5495203459769028E-4 0.0 0.0 0.502819352269505 0.0 3 1.5495203459769028E-4 0.0 0.0 0.5847889785716831 0.0 4 1.5495203459769028E-4 0.0 0.0 1.2185428000762364 0.0 5 1.5495203459769028E-4 0.0 0.0 3.900917470996853 0.0 6 1.5495203459769028E-4 1.5495203459769028E-4 0.0 4.27140778571993 0.0 7 1.5495203459769028E-4 1.5495203459769028E-4 0.0 4.757647270287483 0.0 8 1.5495203459769028E-4 1.5495203459769028E-4 0.0 5.341661488686177 0.0 9 1.5495203459769028E-4 1.5495203459769028E-4 0.0 5.45957998701502 0.0 10 1.5495203459769028E-4 1.5495203459769028E-4 0.0 8.141954657935637 0.0 11 1.5495203459769028E-4 1.5495203459769028E-4 0.0 8.28187634517735 0.0 12 1.5495203459769028E-4 1.5495203459769028E-4 0.0 10.479096195772598 0.0 13 1.5495203459769028E-4 1.5495203459769028E-4 0.0 10.647219153311093 0.0 14 1.5495203459769028E-4 1.5495203459769028E-4 0.0 10.771025828954647 0.0 15 1.5495203459769028E-4 1.5495203459769028E-4 0.0 11.187691849987836 0.0 16 1.5495203459769028E-4 1.5495203459769028E-4 0.0 11.408653451324142 0.0 17 1.5495203459769028E-4 1.5495203459769028E-4 0.0 11.52424766913402 0.0 18 1.5495203459769028E-4 1.5495203459769028E-4 0.0 11.607147007643784 0.0 19 1.5495203459769028E-4 1.5495203459769028E-4 0.0 12.150253888908688 0.0 20 1.5495203459769028E-4 1.5495203459769028E-4 0.0 12.269257051479714 0.0 21 1.5495203459769028E-4 1.5495203459769028E-4 0.0 12.341929555706031 0.0 22 1.5495203459769028E-4 1.5495203459769028E-4 0.0 12.49626178216533 0.0 23 1.5495203459769028E-4 1.5495203459769028E-4 0.0 12.58287996950544 0.0 24 1.5495203459769028E-4 1.5495203459769028E-4 0.0 12.667483780395779 0.0 25 1.5495203459769028E-4 1.5495203459769028E-4 0.0 12.7398463805529 0.0 26 1.5495203459769028E-4 1.5495203459769028E-4 0.0 12.824140287374043 0.0 27 1.5495203459769028E-4 1.5495203459769028E-4 0.0 12.933846327869208 0.0 28 1.5495203459769028E-4 1.5495203459769028E-4 0.0 13.006363880060928 0.0 29 1.5495203459769028E-4 1.5495203459769028E-4 0.0 13.08399484939437 0.0 30 1.5495203459769028E-4 1.5495203459769028E-4 0.0 13.18796766460942 0.0 31 1.5495203459769028E-4 1.5495203459769028E-4 0.0 13.274275947880334 0.0 32 1.5495203459769028E-4 1.5495203459769028E-4 0.0 13.374994770368833 0.0 33 1.5495203459769028E-4 1.5495203459769028E-4 0.0 13.461612957708942 0.0 34 1.5495203459769028E-4 1.5495203459769028E-4 0.0 13.587898865906059 0.0 35 1.5495203459769028E-4 1.5495203459769028E-4 0.0 13.692026633155706 0.0 36 1.5495203459769028E-4 1.5495203459769028E-4 0.0 13.793210311747998 0.0 37 1.5495203459769028E-4 1.5495203459769028E-4 0.0 13.904775776658335 0.0 38 1.5495203459769028E-4 1.5495203459769028E-4 0.0 14.02920226044028 0.0 39 1.5495203459769028E-4 1.5495203459769028E-4 0.0 14.181675062484407 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CTCCGCG 35 1.2108285E-7 45.000004 1 TCGCCTG 25 3.8888975E-5 45.0 1 CTCGTAA 20 7.030984E-4 45.0 33 ATCCGGC 20 7.030984E-4 45.0 6 CGAATAG 20 7.030984E-4 45.0 26 AACGACG 20 7.030984E-4 45.0 11 TCGTAAC 20 7.030984E-4 45.0 34 CGTTTTT 20465 0.0 44.54923 1 CCGATGA 370 0.0 43.175674 18 TACGGCT 1495 0.0 43.04348 7 CGATGAA 385 0.0 42.66234 19 TGATACC 1735 0.0 42.536022 4 CGGCTGT 1520 0.0 42.48355 9 ACGGCTG 1510 0.0 42.46689 8 GATACCT 1760 0.0 42.1875 5 ATACCTG 1785 0.0 41.596638 6 GCCGATT 65 0.0 41.53846 9 TTCCGCG 60 3.6379788E-12 41.249996 1 ACGGGAT 60 3.6379788E-12 41.249996 5 TTACGGG 60 3.6379788E-12 41.249996 3 >>END_MODULE