SRR2933287.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2933287.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	431682
Sequences flagged as poor quality	0
Sequence length	51
%GC	33

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	28474	6.59605913612335	No Hit
GAATGATACCTGTCTCTTATACACATCTGACGCAAGTACCGTCGTATGCCG	6317	1.4633457035502986	No Hit
GAATGATACGGCTGTCTCTTATACACATCTGACGCAAGTACCGTCGTATGC	4262	0.9873008371903392	No Hit
GAATCTGTCTCTTATACACATCTGACGCAAGTACCGTCGTATGCCGTCTTC	3942	0.9131721961999805	No Hit
GAACTGTCTCTTATACACATCTGACGCAAGTACCGTCGTATGCCGTCTTCT	1214	0.28122553175717313	No Hit
GCTGTCTCTTATACACATCTGACGCAAGTACCGTCGTATGCCGTCTTCTGC	1100	0.2548172034043578	No Hit
GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCAAGTACCGT	1037	0.24022312720938097	No Hit
GAATGATCTGTCTCTTATACACATCTGACGCAAGTACCGTCGTATGCCGTC	834	0.1931977705811222	No Hit
GAATGATACGGCGACTGTCTCTTATACACATCTGACGCAAGTACCGTCGTA	549	0.12717694969908405	No Hit
GAATGATACCTGTCTCTTCTACACATCTGACGCAAGTACCGTCGTATGCCG	538	0.12462877766504048	No Hit
GAATGCTGTCTCTTATACACATCTGACGCAAGTACCGTCGTATGCCGTCTT	474	0.10980304946696874	No Hit
GAATGACTGTCTCTTATACACATCTGACGCAAGTACCGTCGTATGCCGTCT	437	0.10123192535245852	No Hit
GAATCTTTCTCTTATACACATCTGACGCAAGTACCGTCGTATGCCGTCTTC	433	0.10030531734007903	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TGATCCG	25	3.886744E-5	45.0	4
GCACGGG	25	3.886744E-5	45.0	3
CCGCTGA	20	7.028386E-4	45.0	18
CCCGTTG	20	7.028386E-4	45.0	1
GTTCGCG	25	3.886744E-5	45.0	1
GCGATCG	25	3.886744E-5	45.0	9
CGATCGT	20	7.028386E-4	45.0	10
GTACGGG	20	7.028386E-4	45.0	3
CGTTTTT	15165	0.0	44.569733	1
TTCTTCG	105	0.0	42.857143	1
ACGGCTG	540	0.0	41.25	8
ACACGAC	105	0.0	40.714287	26
GACACGA	105	0.0	40.714287	25
GCACGCC	50	1.0786607E-9	40.5	25
GCGTTTG	50	1.0786607E-9	40.5	1
TACGGCT	550	0.0	40.5	7
TGGGCGA	400	0.0	40.5	6
CGGTAGG	50	1.0786607E-9	40.5	31
CGCCGGT	50	1.0786607E-9	40.5	28
GTTTTTT	16835	0.0	40.442528	2