##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2933287.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 431682 Sequences flagged as poor quality 0 Sequence length 51 %GC 33 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 28.955578411886528 31.0 28.0 31.0 19.0 33.0 2 29.328063250262925 31.0 30.0 33.0 16.0 34.0 3 29.48632789877734 31.0 30.0 33.0 16.0 34.0 4 32.48765989779513 35.0 32.0 37.0 19.0 37.0 5 33.81467144796401 35.0 33.0 37.0 30.0 37.0 6 33.22825135168944 35.0 33.0 37.0 26.0 37.0 7 32.30758289666931 35.0 32.0 35.0 25.0 37.0 8 33.338531604282785 35.0 33.0 37.0 28.0 37.0 9 33.22218901876845 35.0 31.0 38.0 25.0 39.0 10 31.965513966299266 35.0 28.0 39.0 15.0 39.0 11 33.03321426420374 37.0 31.0 39.0 17.0 39.0 12 33.67267340310692 37.0 31.0 39.0 25.0 39.0 13 33.93982607567607 37.0 32.0 39.0 26.0 39.0 14 33.943787324929 37.0 32.0 40.0 21.0 41.0 15 34.68733002534273 37.0 32.0 40.0 25.0 41.0 16 34.913524307244685 37.0 32.0 40.0 26.0 41.0 17 32.946632011527 36.0 30.0 40.0 18.0 41.0 18 33.553856774199524 36.0 31.0 39.0 24.0 39.0 19 33.30895427652763 37.0 32.0 37.0 23.0 39.0 20 32.871729652846305 35.0 32.0 37.0 25.0 39.0 21 32.99696535875946 35.0 32.0 37.0 25.0 39.0 22 32.99279098966369 35.0 31.0 37.0 25.0 39.0 23 34.10674755954615 35.0 33.0 38.0 27.0 40.0 24 32.27217488799626 35.0 31.0 37.0 21.0 39.0 25 31.323495072761894 34.0 29.0 37.0 18.0 39.0 26 30.416792917008355 33.0 25.0 37.0 18.0 39.0 27 32.44753313781904 34.0 30.0 37.0 22.0 39.0 28 32.53078655121131 35.0 31.0 37.0 21.0 39.0 29 32.569972804054835 35.0 31.0 38.0 21.0 40.0 30 31.503868588451684 35.0 29.0 37.0 18.0 40.0 31 31.961819116849902 35.0 30.0 37.0 21.0 40.0 32 31.709489855958786 35.0 30.0 37.0 18.0 40.0 33 31.330261627772295 35.0 30.0 38.0 15.0 40.0 34 30.140971826483383 35.0 25.0 38.0 9.0 40.0 35 29.446252102241928 35.0 23.0 38.0 7.0 40.0 36 28.793496138361107 34.0 21.0 38.0 7.0 40.0 37 28.797098327009234 35.0 21.0 38.0 7.0 40.0 38 28.87456970640425 35.0 21.0 38.0 7.0 40.0 39 28.412947493756977 34.0 20.0 38.0 7.0 40.0 40 28.363049652290343 34.0 19.0 38.0 7.0 40.0 41 27.948547773592598 33.0 18.0 38.0 7.0 40.0 42 28.214861865910553 34.0 18.0 38.0 7.0 40.0 43 28.218774468242827 34.0 18.0 38.0 7.0 40.0 44 28.140927812602797 34.0 18.0 38.0 7.0 40.0 45 28.34116085451791 34.0 18.0 38.0 7.0 40.0 46 28.073104739136678 34.0 18.0 38.0 7.0 40.0 47 28.126662682252213 34.0 18.0 38.0 7.0 40.0 48 27.85348705760259 34.0 18.0 38.0 7.0 40.0 49 27.616268456873346 33.0 18.0 37.0 7.0 40.0 50 27.836916989821212 34.0 18.0 38.0 7.0 40.0 51 26.527212160803554 31.0 16.0 36.0 7.0 39.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 2.0 9 9.0 10 11.0 11 24.0 12 32.0 13 67.0 14 80.0 15 184.0 16 388.0 17 754.0 18 1469.0 19 2317.0 20 3806.0 21 5534.0 22 7648.0 23 10622.0 24 14849.0 25 20487.0 26 25094.0 27 26035.0 28 24163.0 29 23623.0 30 24788.0 31 27660.0 32 31635.0 33 36251.0 34 40721.0 35 45166.0 36 34489.0 37 19472.0 38 4234.0 39 68.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 18.68064918157347 2.2416964339490644 34.653518098971006 44.424136285506464 2 44.41255368535172 8.971418775858155 33.618496949143115 12.997530589647008 3 11.215200077835073 8.95219165960128 66.19479153636242 13.637816726201232 4 10.182263796035045 2.518057273641245 71.40742491000319 15.892254020320514 5 15.575354080086731 3.021668728369494 65.97194230938514 15.431034882158626 6 13.117294675247058 8.07376726386553 67.47466885346157 11.334269207425837 7 51.41191895886323 0.8791193517450345 45.37437280220162 2.3345888871901073 8 53.06753582498228 5.538567741995265 38.92935077209613 2.46454566092633 9 49.342571615216755 2.598903822721355 38.72920344142216 9.32932112063973 10 26.237600826534347 20.400665304552888 43.64254242706437 9.719191441848398 11 17.18417724158061 16.002057069787483 54.592732613358905 12.221033075273002 12 14.778934493446567 15.132898754175528 55.26915646239593 14.819010289981977 13 14.104132208431205 15.886694372246238 58.57320898253807 11.435964436784484 14 12.908344568455481 17.461927993291358 54.43937898731011 15.190348450943056 15 11.495267349576773 16.164676775960082 58.72517269656831 13.614883177894841 16 13.304701145750808 16.408374683215886 53.3693783850149 16.91754578601841 17 13.184705408147664 16.50844834855287 56.13090191390885 14.175944329390616 18 13.319526873948877 15.818588683336346 55.417413744376645 15.444470698338128 19 13.12702405937704 18.010479936620012 53.13749472991694 15.725001274086017 20 15.143786398320985 17.673889576123162 55.77971747721703 11.402606548338824 21 15.138226750246709 19.347575298483605 53.23015553115488 12.284042420114808 22 14.10088908038788 15.45304182245264 54.652730482160486 15.793338614999003 23 13.337827382193373 19.72447310751896 53.97792819714512 12.959771313142546 24 13.730245875436085 16.761643987935564 54.059238050231414 15.44887208639693 25 12.63800668084377 20.4541769172678 52.05382665943913 14.853989742449302 26 13.123317627327523 18.009553328607634 53.58643631191479 15.280692732150056 27 13.61441987388865 18.718871762084127 52.21158167354674 15.455126690480492 28 12.009998100453574 18.67578448950848 54.642769446027394 14.671447964010545 29 14.134478620836635 18.22290482345801 52.58732122256661 15.055295333138746 30 13.242618408921384 20.44884892119662 53.14490759401597 13.163625075866031 31 15.676354353436095 18.217808479389923 50.757270398117136 15.348566769056852 32 15.149114394392168 20.444215881134724 50.90900246014427 13.497667264328836 33 14.350146635717959 20.786134237702754 47.41569025347362 17.448028873105667 34 15.454431734471207 23.277551530988088 45.20526683994237 16.062749894598337 35 13.77518636403649 25.198641592653853 42.96125388596235 18.064918157347307 36 18.541194675710358 24.390407753855847 40.63546777488985 16.43292979554394 37 16.14637626771559 24.965368025537316 42.95430432586951 15.93395138087759 38 18.35842124526851 25.183120908446494 40.53539410955286 15.923063736732132 39 17.807784433911998 23.363494424136285 41.020473404033524 17.80824773791819 40 17.527485510167207 24.932010137091655 40.189074364926036 17.351429987815102 41 18.728369494211016 24.663293813501603 38.938153548213734 17.670183144073647 42 17.02734883548538 23.9363698277899 41.00124628777665 18.035035048948068 43 19.323251838158644 23.66186220412248 38.95506414443965 18.05982181327922 44 18.556252055911525 24.443919366570764 38.69839372501054 18.30143485250717 45 17.349576771790346 23.180489341691338 39.2105763038533 20.259357582665018 46 18.66049545730422 24.453417098697653 38.63121464411303 18.2548727998851 47 15.817662075323966 23.64819473593988 42.92465286947336 17.60949031926279 48 17.45428347718923 23.551364198646226 38.974522912699626 20.019829411464922 49 16.38196635486307 22.535106861069025 41.16525590596782 19.917670878100083 50 17.522157514096023 22.2471634212221 40.47724945677606 19.75342960790582 51 16.892990673690356 21.792430539146874 39.71557767060012 21.599001116562654 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 88.0 1 385.0 2 682.0 3 22325.5 4 43969.0 5 30031.0 6 16093.0 7 15185.0 8 14277.0 9 13798.0 10 13319.0 11 12926.5 12 12534.0 13 11866.5 14 11199.0 15 10490.0 16 9781.0 17 9020.0 18 8259.0 19 7538.5 20 6818.0 21 6342.0 22 5866.0 23 5543.0 24 5220.0 25 5202.5 26 5337.5 27 5490.0 28 6007.0 29 6524.0 30 7167.5 31 7811.0 32 8840.0 33 9869.0 34 10629.0 35 11389.0 36 12451.5 37 13514.0 38 14021.5 39 14529.0 40 15161.0 41 15793.0 42 16507.5 43 17222.0 44 18166.0 45 19110.0 46 29173.0 47 39236.0 48 32700.0 49 26164.0 50 24111.0 51 22058.0 52 19432.0 53 16806.0 54 15116.5 55 13427.0 56 12296.5 57 11166.0 58 9846.0 59 8526.0 60 7616.5 61 6707.0 62 5670.5 63 4634.0 64 3946.0 65 3258.0 66 2585.5 67 1913.0 68 1513.0 69 1113.0 70 904.0 71 695.0 72 615.5 73 536.0 74 471.5 75 332.0 76 257.0 77 196.0 78 135.0 79 96.0 80 57.0 81 38.0 82 19.0 83 19.5 84 20.0 85 11.5 86 3.0 87 2.5 88 2.0 89 1.0 90 0.0 91 0.5 92 1.0 93 0.5 94 0.0 95 0.5 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 431682.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 52.393798247051805 #Duplication Level Percentage of deduplicated Percentage of total 1 79.92192798700525 41.87413370466557 2 8.384007497391162 8.785399946401645 3 3.9145666356964877 6.152970436059664 4 2.4081399662206406 5.046863981633056 5 1.6210595215995909 4.246673276057565 6 1.0829131708227462 3.404276051469726 7 0.7326609711095494 2.687082377266195 8 0.5168806487342832 2.166507234207143 9 0.3693228640500485 1.7415204864355425 >10 0.9595713431102068 7.278247734987092 >50 0.04831261515655515 1.7390139863973264 >100 0.03612158142533782 3.458865935933681 >500 0.0013545593034501682 0.45444781225146036 >1k 0.0022575988390836138 2.73354735583843 >5k 4.515197678167227E-4 1.4944023060866607 >10k+ 4.515197678167227E-4 6.736047374309257 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 28474 6.59605913612335 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCAAGTACCGTCGTATGCCG 6317 1.4633457035502986 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCAAGTACCGTCGTATGC 4262 0.9873008371903392 No Hit GAATCTGTCTCTTATACACATCTGACGCAAGTACCGTCGTATGCCGTCTTC 3942 0.9131721961999805 No Hit GAACTGTCTCTTATACACATCTGACGCAAGTACCGTCGTATGCCGTCTTCT 1214 0.28122553175717313 No Hit GCTGTCTCTTATACACATCTGACGCAAGTACCGTCGTATGCCGTCTTCTGC 1100 0.2548172034043578 No Hit GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCAAGTACCGT 1037 0.24022312720938097 No Hit GAATGATCTGTCTCTTATACACATCTGACGCAAGTACCGTCGTATGCCGTC 834 0.1931977705811222 No Hit GAATGATACGGCGACTGTCTCTTATACACATCTGACGCAAGTACCGTCGTA 549 0.12717694969908405 No Hit GAATGATACCTGTCTCTTCTACACATCTGACGCAAGTACCGTCGTATGCCG 538 0.12462877766504048 No Hit GAATGCTGTCTCTTATACACATCTGACGCAAGTACCGTCGTATGCCGTCTT 474 0.10980304946696874 No Hit GAATGACTGTCTCTTATACACATCTGACGCAAGTACCGTCGTATGCCGTCT 437 0.10123192535245852 No Hit GAATCTTTCTCTTATACACATCTGACGCAAGTACCGTCGTATGCCGTCTTC 433 0.10030531734007903 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.06092447681395101 0.0 2 0.0 0.0 0.0 0.430177769747175 0.0 3 0.0 0.0 0.0 0.5524900273812667 0.0 4 0.0 0.0 0.0 1.0384959298743057 0.0 5 0.0 0.0 0.0 2.3151301189301385 0.0 6 0.0 0.0 0.0 2.680213675807655 0.0 7 0.0 0.0 0.0 3.0193522083385456 0.0 8 0.0 0.0 0.0 3.456016234172377 0.0 9 0.0 0.0 0.0 3.6684411210103733 0.0 10 0.0 0.0 0.0 5.549687038143819 0.0 11 0.0 0.0 0.0 5.9200985910925175 0.0 12 0.0 0.0 0.0 7.324604685856719 0.0 13 0.0 0.0 0.0 7.484444567992179 0.0 14 0.0 0.0 0.0 7.584981537335353 0.0 15 0.0 0.0 0.0 7.835397352680909 0.0 16 0.0 0.0 0.0 8.009368007005156 0.0 17 0.0 0.0 0.0 8.168744585134428 0.0 18 0.0 0.0 0.0 8.329047771276079 0.0 19 0.0 0.0 0.0 8.75575076097683 0.0 20 0.0 0.0 0.0 8.918833771155619 0.0 21 0.0 0.0 0.0 9.076588785263226 0.0 22 0.0 0.0 0.0 9.304071052302389 0.0 23 0.0 0.0 0.0 9.468543974499747 0.0 24 0.0 0.0 0.0 9.602438832288582 0.0 25 0.0 0.0 0.0 9.728225869969098 0.0 26 0.0 0.0 0.0 9.840808743473206 0.0 27 0.0 0.0 0.0 9.954549876992786 0.0 28 0.0 0.0 0.0 10.066669446490703 0.0 29 0.0 0.0 0.0 10.18921335612789 0.0 30 0.0 0.0 0.0 10.333069250049805 0.0 31 0.0 0.0 0.0 10.457698027714846 0.0 32 0.0 0.0 0.0 10.578852025333463 0.0 33 0.0 0.0 0.0 10.70139593497065 0.0 34 0.0 0.0 0.0 10.838070616796623 0.0 35 0.0 0.0 0.0 10.984243030749488 0.0 36 0.0 0.0 0.0 11.107945200402147 0.0 37 0.0 0.0 0.0 11.255739178376675 0.0 38 0.0 0.0 0.0 11.407702892406911 0.0 39 0.0 0.0 0.0 11.605302051046836 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TGATCCG 25 3.886744E-5 45.0 4 GCACGGG 25 3.886744E-5 45.0 3 CCGCTGA 20 7.028386E-4 45.0 18 CCCGTTG 20 7.028386E-4 45.0 1 GTTCGCG 25 3.886744E-5 45.0 1 GCGATCG 25 3.886744E-5 45.0 9 CGATCGT 20 7.028386E-4 45.0 10 GTACGGG 20 7.028386E-4 45.0 3 CGTTTTT 15165 0.0 44.569733 1 TTCTTCG 105 0.0 42.857143 1 ACGGCTG 540 0.0 41.25 8 ACACGAC 105 0.0 40.714287 26 GACACGA 105 0.0 40.714287 25 GCACGCC 50 1.0786607E-9 40.5 25 GCGTTTG 50 1.0786607E-9 40.5 1 TACGGCT 550 0.0 40.5 7 TGGGCGA 400 0.0 40.5 6 CGGTAGG 50 1.0786607E-9 40.5 31 CGCCGGT 50 1.0786607E-9 40.5 28 GTTTTTT 16835 0.0 40.442528 2 >>END_MODULE