SRR2933286.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2933286.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	311194
Sequences flagged as poor quality	0
Sequence length	51
%GC	39

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	9207	2.958604600345765	No Hit
GAATGATACCTGTCTCTTATACACATCTGACGCCTTGTCGATCGTATGCCG	6708	2.1555685520929067	No Hit
GAATCTGTCTCTTATACACATCTGACGCCTTGTCGATCGTATGCCGTCTTC	6684	2.147856321137297	No Hit
GAATGATACGGCTGTCTCTTATACACATCTGACGCCTTGTCGATCGTATGC	5594	1.7975924985700238	No Hit
GAACTGTCTCTTATACACATCTGACGCCTTGTCGATCGTATGCCGTCTTCT	1669	0.5363213943713567	No Hit
GAATGATCTGTCTCTTATACACATCTGACGCCTTGTCGATCGTATGCCGTC	1436	0.4614484855106461	No Hit
GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCCTTGTCGAT	1250	0.401678695604671	No Hit
GAATGACTGTCTCTTATACACATCTGACGCCTTGTCGATCGTATGCCGTCT	1129	0.3627961978701389	No Hit
GCTGTCTCTTATACACATCTGACGCCTTGTCGATCGTATGCCGTCTTCTGC	1096	0.3521918803061756	No Hit
GAATGATACGGCGACTGTCTCTTATACACATCTGACGCCTTGTCGATCGTA	1077	0.3460863641329846	No Hit
GAATGCTGTCTCTTATACACATCTGACGCCTTGTCGATCGTATGCCGTCTT	579	0.18605757180408364	No Hit
GAATGATACGGCGACCTGTCTCTTATACACATCTGACGCCTTGTCGATCGT	420	0.13496404172316948	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GATACCG	20	7.025349E-4	45.0	27
CGCGCCA	20	7.025349E-4	45.0	38
CCTACAC	70	0.0	45.0	28
TACGGTG	25	3.884227E-5	45.0	7
CCAGATA	20	7.025349E-4	45.0	13
CTACGAA	20	7.025349E-4	45.0	11
CGAATAT	20	7.025349E-4	45.0	14
GCTACGA	20	7.025349E-4	45.0	10
ATACGGT	25	3.884227E-5	45.0	6
AGCTACG	20	7.025349E-4	45.0	9
ACGAGGG	20	7.025349E-4	45.0	3
CGTTTTT	7455	0.0	44.245476	1
GATACCT	885	0.0	42.203392	5
GCCCTAC	75	0.0	42.0	26
TACGGCT	795	0.0	41.88679	7
GTATGAT	65	0.0	41.538464	1
TGATACC	900	0.0	41.25	4
ATACCTG	915	0.0	41.065575	6
TCGTCGG	50	1.0768417E-9	40.5	2
TACCTGT	930	0.0	40.40323	7