##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2933285.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 225477 Sequences flagged as poor quality 0 Sequence length 51 %GC 38 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 28.736514145566954 31.0 28.0 31.0 16.0 33.0 2 29.195283776172293 31.0 30.0 33.0 16.0 34.0 3 29.41576302682757 31.0 30.0 33.0 16.0 34.0 4 32.21188413895874 35.0 32.0 37.0 19.0 37.0 5 33.60659845571832 35.0 33.0 37.0 28.0 37.0 6 33.00531318050178 35.0 33.0 37.0 25.0 37.0 7 31.869068685497854 35.0 30.0 35.0 25.0 37.0 8 33.09444865773449 35.0 33.0 35.0 28.0 37.0 9 32.78239909170337 35.0 31.0 37.0 25.0 39.0 10 30.90181260172878 35.0 27.0 39.0 15.0 39.0 11 31.713895430576066 35.0 27.0 39.0 15.0 39.0 12 32.727249342505 35.0 30.0 39.0 21.0 39.0 13 32.85787463909845 35.0 31.0 39.0 21.0 39.0 14 33.24283186311686 36.0 31.0 40.0 18.0 41.0 15 33.84778048315349 36.0 31.0 40.0 23.0 41.0 16 34.016312085046366 36.0 32.0 40.0 23.0 41.0 17 32.02655259738244 35.0 27.0 39.0 17.0 41.0 18 32.73890906833069 36.0 30.0 39.0 21.0 39.0 19 32.52857275908408 36.0 30.0 37.0 18.0 39.0 20 32.35637781237111 34.0 30.0 37.0 24.0 39.0 21 32.67270275903972 35.0 31.0 37.0 23.0 39.0 22 32.971504854153636 35.0 31.0 37.0 25.0 39.0 23 34.04628409993037 35.0 33.0 38.0 27.0 40.0 24 32.22018653787304 35.0 31.0 37.0 21.0 39.0 25 31.421745898694766 34.0 29.0 37.0 18.0 39.0 26 30.74068752023488 33.0 25.0 37.0 19.0 39.0 27 32.341768783512286 34.0 30.0 37.0 22.0 39.0 28 32.43037649072854 35.0 31.0 38.0 21.0 39.0 29 32.73356040749167 35.0 31.0 38.0 22.0 40.0 30 31.64222071430789 35.0 30.0 38.0 18.0 40.0 31 31.86366236911082 35.0 30.0 37.0 20.0 40.0 32 31.726765922910097 35.0 30.0 37.0 18.0 40.0 33 31.77865591612448 35.0 30.0 38.0 16.0 40.0 34 31.028291133907228 35.0 30.0 38.0 12.0 40.0 35 30.428070268807904 35.0 27.0 38.0 10.0 40.0 36 29.80537261006666 34.0 25.0 38.0 8.0 40.0 37 29.885810969633265 35.0 25.0 38.0 8.0 40.0 38 29.771781600784117 35.0 24.0 38.0 8.0 40.0 39 29.286219880519965 34.0 23.0 38.0 7.0 40.0 40 29.02928014830781 34.0 23.0 38.0 8.0 40.0 41 28.514549155789727 33.0 21.0 37.0 7.0 40.0 42 28.96336211675692 34.0 23.0 38.0 7.0 40.0 43 28.996868860238518 34.0 22.0 38.0 7.0 40.0 44 28.951334282432356 34.0 22.0 38.0 7.0 40.0 45 29.194316936982485 34.0 23.0 38.0 7.0 40.0 46 28.93570519387787 34.0 23.0 38.0 7.0 40.0 47 28.980250757283446 34.0 23.0 38.0 7.0 40.0 48 28.7670050603831 34.0 23.0 37.0 7.0 40.0 49 28.562004106849034 34.0 23.0 37.0 7.0 39.0 50 28.732686704187124 34.0 23.0 37.0 7.0 40.0 51 27.077870470158818 32.0 20.0 35.0 7.0 39.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 4.0 9 8.0 10 7.0 11 18.0 12 30.0 13 33.0 14 71.0 15 136.0 16 251.0 17 407.0 18 753.0 19 1204.0 20 1842.0 21 2622.0 22 3777.0 23 5155.0 24 6948.0 25 9366.0 26 11832.0 27 13036.0 28 12822.0 29 12975.0 30 14420.0 31 16101.0 32 18081.0 33 20196.0 34 22435.0 35 23694.0 36 16897.0 37 8698.0 38 1633.0 39 24.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 20.873969407079215 2.7510566487934467 37.09602309769954 39.2789508464278 2 40.01605485260137 8.93173139610692 36.91862141149652 14.13359233979519 3 14.111417129019813 8.828838418109164 62.48752644393885 14.572218008932175 4 12.600398266785525 3.2579819671185977 66.422295843922 17.719323922173878 5 17.140550920936505 3.6575792652909165 61.65994757780173 17.54192223597085 6 15.173609725160436 8.54676973704635 63.948429329820776 12.331191207972433 7 56.260283753997086 1.4449367341236579 39.294473493970564 3.0003060179087004 8 57.925642083228 5.841394022450183 33.01755833189194 3.215405562429871 9 53.90483286543638 2.6579207635368576 33.37413572116003 10.063110649866728 10 31.107829179916358 16.640721670059474 39.412002111080064 12.839447038944105 11 23.746546210921736 16.73474456374708 45.46805217383591 14.050657051495275 12 19.449877371084412 15.182923313686098 49.342948504725534 16.024250810503954 13 17.825764933895698 15.306660989812709 53.2262714157098 13.64130266058179 14 15.715128372295178 16.63761714055092 50.56568962687991 17.081564860273996 15 14.056422606296874 15.157643573402165 54.728420193633944 16.05751362666702 16 16.587944668414075 15.435720716525411 48.29494804348115 19.681386571579363 17 17.095756995170238 15.743512642087662 49.94034868301423 17.22038167972787 18 16.971575814828118 14.811266781090755 49.81927203218067 18.39788537190046 19 17.08289537292052 17.45499540973137 47.30903817240783 18.153071044940283 20 18.23733684588672 18.030663881460192 49.7452068281909 13.986792444462184 21 18.307410511936915 18.83784155368397 47.88648066099868 14.968267273380434 22 17.21417262071076 14.843642588822807 49.28041441033897 18.661770380127464 23 16.615441929775542 19.421936605507437 48.33131538915277 15.631306075564247 24 16.86912634104587 16.945409066113175 47.702426411563046 18.483038181277912 25 16.408768965349015 19.48314018724748 45.813985461931814 18.29410538547169 26 15.9976405575735 16.883761980157622 48.00134825281514 19.117249209453735 27 16.01050217982322 17.25275748745992 48.120207382571174 18.616532950145693 28 14.312324538644742 17.557888387729125 49.39084696000036 18.73894011362578 29 17.497571814420095 16.27128265854167 46.921415488054215 19.30973003898402 30 16.253985994136873 18.04042097420136 49.4582596007575 16.24733343090426 31 18.23911086274875 16.86557830732181 46.716516540489714 18.178794289439722 32 20.359948021305943 18.462636987364565 44.89770575269318 16.279709238636315 33 17.763230839509127 17.856810228981228 44.32203728096435 20.05792165054529 34 18.411190498365688 19.74569468282796 42.17015482732163 19.67295999148472 35 18.14065292690607 21.800449713274524 41.672543097522144 18.386354262297264 36 19.40109190737858 21.74501168633608 39.99121861653295 18.86267778975239 37 20.677940543824867 21.88870705216053 40.13402697392638 17.299325430088214 38 20.061913188484855 21.66828545705327 40.86891345902243 17.400887895439446 39 20.944486577344918 21.217685174097582 37.3514815258319 20.4863467227256 40 22.077639847966754 20.873525902863708 39.44393441459661 17.604899834572926 41 18.781960022530015 23.688890662905752 37.22463932019674 20.304509994367496 42 20.19230342784408 21.75033373692217 39.34503297453843 18.712329860695327 43 19.727067505776645 21.77029142662001 37.524448169879854 20.978192897723495 44 20.426917157847583 21.53346017553897 37.4330863014853 20.60653636512815 45 18.86489531082993 21.220789703606133 37.574564146232206 22.339750839331728 46 20.455744931855577 22.408050488519894 36.29727200557041 20.838932574054116 47 17.492693268049514 21.536564705047525 41.47695773848331 19.49378428841966 48 19.246752440381947 22.773054457882623 36.58599324986584 21.39419985186959 49 19.175791765900733 21.366259086292615 38.62699964963167 20.83094949817498 50 18.777968484590446 21.51527650270316 37.94843819990509 21.758316812801308 51 18.879530949941678 20.842480607778178 36.99313011970179 23.284858322578355 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 66.0 1 247.0 2 428.0 3 10191.0 4 19954.0 5 13345.5 6 6737.0 7 6550.5 8 6364.0 9 6229.5 10 6095.0 11 5651.5 12 5208.0 13 4869.0 14 4530.0 15 4097.5 16 3665.0 17 3365.5 18 3066.0 19 2796.0 20 2526.0 21 2364.0 22 2202.0 23 2038.0 24 1874.0 25 1924.5 26 2056.0 27 2137.0 28 2420.0 29 2703.0 30 2889.0 31 3075.0 32 3474.5 33 3874.0 34 4156.5 35 4439.0 36 4630.5 37 4822.0 38 5236.5 39 5651.0 40 5937.0 41 6223.0 42 6726.5 43 7230.0 44 7888.5 45 8547.0 46 13727.0 47 18907.0 48 16769.0 49 14631.0 50 14032.0 51 13433.0 52 12051.0 53 10669.0 54 10262.0 55 9855.0 56 9527.0 57 9199.0 58 8607.0 59 8015.0 60 7415.0 61 6815.0 62 6190.5 63 5566.0 64 4960.5 65 4355.0 66 3847.0 67 3339.0 68 2874.0 69 2409.0 70 2064.5 71 1720.0 72 1461.5 73 1203.0 74 1011.5 75 709.0 76 598.0 77 430.0 78 262.0 79 212.5 80 163.0 81 120.5 82 78.0 83 53.5 84 29.0 85 21.0 86 13.0 87 8.0 88 3.0 89 3.0 90 3.0 91 2.0 92 1.0 93 0.5 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 225477.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 49.34575402076329 #Duplication Level Percentage of deduplicated Percentage of total 1 74.23413771263102 36.63139499510958 2 10.725594652347917 10.585251108823488 3 5.37686291804584 7.959760648717607 4 3.205129809201369 6.326381886778669 5 2.190125029257908 5.403668548423886 6 1.3538279050864948 4.008339527450606 7 0.9349812560642665 3.229614855304011 8 0.5281571709242571 2.0849851072584498 9 0.3501144007059199 1.554899318672515 >10 1.0294548959921366 7.809829006791313 >50 0.04276962137421462 1.4405384182898762 >100 0.021882131865877247 1.9053390595575124 >500 0.0029839270726196247 0.8221130666560621 >1k 0.0029839270726196247 3.3772895592002166 >5k 0.0 0.0 >10k+ 9.946423575398749E-4 6.860594892966231 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 13978 6.199301924364791 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCCTTGTCGATCGTATGCCG 2924 1.2968063261441298 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCCTTGTCGATCGTATGC 2105 0.9335763736434315 No Hit GAATCTGTCTCTTATACACATCTGACGCCTTGTCGATCGTATGCCGTCTTC 1852 0.8213698071200167 No Hit GAACTGTCTCTTATACACATCTGACGCCTTGTCGATCGTATGCCGTCTTCT 628 0.2785206473387529 No Hit GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCCTTGTCGAT 537 0.23816176372756423 No Hit GCTGTCTCTTATACACATCTGACGCCTTGTCGATCGTATGCCGTCTTCTGC 510 0.2261871499088599 No Hit GAATGATCTGTCTCTTATACACATCTGACGCCTTGTCGATCGTATGCCGTC 412 0.18272373678911819 No Hit GAATGATACGGCGACTGTCTCTTATACACATCTGACGCCTTGTCGATCGTA 315 0.13970382788488406 No Hit GAATGACTGTCTCTTATACACATCTGACGCCTTGTCGATCGTATGCCGTCT 260 0.11531109603196779 No Hit GAATGATACCTGTCTCTTCTACACATCTGACGCCTTGTCGATCGTATGCCG 254 0.11265007073892237 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.09091836417905153 0.0 2 0.0 0.0 0.0 0.4647924178519317 0.0 3 0.0 0.0 0.0 0.6080442794608762 0.0 4 0.0 0.0 0.0 1.122065665234148 0.0 5 0.0 0.0 0.0 2.2889252562345606 0.0 6 0.0 0.0 0.0 2.599821711305366 0.0 7 0.0 0.0 0.0 2.923579788625891 0.0 8 0.0 0.0 0.0 3.3484568270821415 0.0 9 0.0 0.0 0.0 3.516101420544002 0.0 10 0.0 0.0 0.0 5.420952026149009 0.0 11 0.0 0.0 0.0 5.934529907706772 0.0 12 0.0 0.0 0.0 7.398980827312764 0.0 13 0.0 0.0 0.0 7.612306354971904 0.0 14 0.0 0.0 0.0 7.723182408848796 0.0 15 0.0 0.0 0.0 8.042505444014246 0.0 16 0.0 0.0 0.0 8.275788661371227 0.0 17 0.0 0.0 0.0 8.479800600504708 0.0 18 0.0 0.0 0.0 8.672281430034992 0.0 19 0.0 0.0 0.0 9.114011628680531 0.0 20 0.0 0.0 0.0 9.308266475072845 0.0 21 0.0 0.0 0.0 9.557072339972592 0.0 22 0.0 0.0 0.0 9.859098710733246 0.0 23 0.0 0.0 0.0 10.108791584064006 0.0 24 0.0 0.0 0.0 10.291071816637617 0.0 25 0.0 0.0 0.0 10.473352049211227 0.0 26 0.0 0.0 0.0 10.615716902389158 0.0 27 0.0 0.0 0.0 10.790901067514646 0.0 28 0.0 0.0 0.0 10.942136005002727 0.0 29 0.0 0.0 0.0 11.123529229145323 0.0 30 0.0 0.0 0.0 11.344394328468091 0.0 31 0.0 0.0 0.0 11.52179601467112 0.0 32 0.0 0.0 0.0 11.718268382140971 0.0 33 0.0 0.0 0.0 11.882364941878773 0.0 34 0.0 0.0 0.0 12.096577477968928 0.0 35 0.0 0.0 0.0 12.355583939825348 0.0 36 0.0 0.0 0.0 12.540081693476496 0.0 37 0.0 0.0 0.0 12.717926883895032 0.0 38 0.0 0.0 0.0 12.950323092820998 0.0 39 0.0 0.0 0.0 13.380522181863338 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CATGCCG 25 3.8808008E-5 45.000004 40 ATTCCAA 25 3.8808008E-5 45.000004 21 GGGCATA 25 3.8808008E-5 45.000004 7 CACCGGT 35 1.2061173E-7 45.000004 16 CCGTTGG 25 3.8808008E-5 45.000004 2 GTTTGCG 20 7.021214E-4 45.0 1 GATACTG 20 7.021214E-4 45.0 5 TGATACT 20 7.021214E-4 45.0 4 ATCAGGA 20 7.021214E-4 45.0 16 TAGCGGG 20 7.021214E-4 45.0 3 GGCATAT 20 7.021214E-4 45.0 8 CGTTTTT 6095 0.0 44.40935 1 TACGGCT 355 0.0 41.197186 7 ATACGGC 690 0.0 41.086956 6 GGACTAA 55 6.002665E-11 40.909092 8 CGACCAC 220 0.0 40.909092 12 CGGGATT 55 6.002665E-11 40.909092 6 GAATGAT 1215 0.0 40.74074 1 ACGGCTG 360 0.0 40.625 8 ACGGCGA 360 0.0 40.625 8 >>END_MODULE