SRR2933284.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2933284.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	577585
Sequences flagged as poor quality	0
Sequence length	51
%GC	38

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	18529	3.2080126734593177	No Hit
GAATCTGTCTCTTATACACATCTGACGCGCGAATCATCGTATGCCGTCTTC	11563	2.0019564219984938	No Hit
GAATGATACCTGTCTCTTATACACATCTGACGCGCGAATCATCGTATGCCG	10794	1.8688158452868409	No Hit
GAATGATACGGCTGTCTCTTATACACATCTGACGCGCGAATCATCGTATGC	8819	1.5268748322757688	No Hit
GAACTGTCTCTTATACACATCTGACGCGCGAATCATCGTATGCCGTCTTCT	2948	0.5104010665096912	No Hit
GAATGATCTGTCTCTTATACACATCTGACGCGCGAATCATCGTATGCCGTC	2225	0.3852246855441191	No Hit
GCTGTCTCTTATACACATCTGACGCGCGAATCATCGTATGCCGTCTTCTGC	1969	0.34090220487027884	No Hit
GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCGCGAATCAT	1867	0.3232424664767956	No Hit
GAATGACTGTCTCTTATACACATCTGACGCGCGAATCATCGTATGCCGTCT	1725	0.2986573404780249	No Hit
GAATGATACGGCGACTGTCTCTTATACACATCTGACGCGCGAATCATCGTA	1574	0.27251400226806444	No Hit
GAATGCTGTCTCTTATACACATCTGACGCGCGAATCATCGTATGCCGTCTT	1121	0.19408398763818313	No Hit
GAATGATACGGCGACCTGTCTCTTATACACATCTGACGCGCGAATCATCGT	632	0.10942112416354303	No Hit
CTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	578	0.10007185089640484	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TAGCGAC	20	7.0303667E-4	45.000004	30
ACGATAC	20	7.0303667E-4	45.000004	3
CGTTTTT	15110	0.0	44.151226	1
GATACCT	1285	0.0	41.67315	5
CCGATGA	395	0.0	41.582275	18
TGATACC	1295	0.0	41.351353	4
ATACCTG	1310	0.0	40.87786	6
TACGGCT	1030	0.0	40.631065	7
TGATCCG	50	1.0804797E-9	40.5	4
CGATGAA	400	0.0	40.5	19
ACGGCTG	1035	0.0	40.434784	8
GAATCTG	1325	0.0	39.566036	1
TTGTGCG	80	0.0	39.375004	1
CGGCTGT	1085	0.0	39.19355	9
ATGATAC	4190	0.0	39.146782	3
GAATGAT	4330	0.0	39.128178	1
AATGATA	4165	0.0	38.89556	2
CGACCAC	1115	0.0	38.744396	12
TGGGCGA	610	0.0	38.729507	6
CACGACC	215	0.0	38.720932	27