##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2933284.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 577585 Sequences flagged as poor quality 0 Sequence length 51 %GC 38 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 29.59164278850732 31.0 28.0 33.0 25.0 34.0 2 29.075644277465653 31.0 28.0 33.0 16.0 34.0 3 29.08272375494516 31.0 28.0 34.0 16.0 34.0 4 33.2449249893955 35.0 32.0 37.0 28.0 37.0 5 34.23904706666551 35.0 33.0 37.0 30.0 37.0 6 33.83848437892258 35.0 33.0 37.0 28.0 37.0 7 33.50446947202576 35.0 32.0 37.0 28.0 37.0 8 33.66476968757845 35.0 33.0 37.0 28.0 37.0 9 34.71939195096826 37.0 34.0 39.0 28.0 39.0 10 34.4589419739086 37.0 32.0 39.0 27.0 39.0 11 34.70835807716613 37.0 34.0 39.0 27.0 39.0 12 34.79679008284495 37.0 34.0 39.0 27.0 39.0 13 34.98864755836803 37.0 34.0 39.0 27.0 39.0 14 35.76706978193686 38.0 34.0 40.0 27.0 41.0 15 36.160594544525914 38.0 34.0 40.0 27.0 41.0 16 36.03045266064735 38.0 34.0 40.0 28.0 41.0 17 35.36857778508791 37.0 33.0 40.0 27.0 41.0 18 35.14785183133218 37.0 33.0 39.0 27.0 40.0 19 34.43200394747093 37.0 33.0 38.0 27.0 40.0 20 33.984241280504165 35.0 32.0 38.0 27.0 40.0 21 34.250027268713694 35.0 33.0 38.0 27.0 40.0 22 34.77278322671122 35.0 33.0 39.0 29.0 40.0 23 35.18289256126804 35.0 34.0 39.0 30.0 40.0 24 34.59852142974627 35.0 33.0 39.0 27.0 40.0 25 33.53369633906698 35.0 33.0 38.0 24.0 40.0 26 33.61044175316187 35.0 32.0 38.0 24.0 40.0 27 34.321632313858565 35.0 33.0 39.0 26.0 40.0 28 34.22945886752599 35.0 33.0 39.0 25.0 40.0 29 34.199975761143385 35.0 33.0 39.0 25.0 40.0 30 33.42170243340807 35.0 33.0 39.0 22.0 40.0 31 33.32177947834518 35.0 33.0 39.0 21.0 40.0 32 32.65155951072136 35.0 31.0 39.0 18.0 40.0 33 32.11518304665114 35.0 31.0 39.0 15.0 40.0 34 31.65367348528788 35.0 30.0 39.0 10.0 40.0 35 31.153224200766985 35.0 29.0 40.0 8.0 41.0 36 30.62840793995689 35.0 25.0 40.0 7.0 41.0 37 30.449937238674828 35.0 24.0 40.0 7.0 40.0 38 30.10143961494845 35.0 23.0 39.0 7.0 40.0 39 29.720567535514252 35.0 23.0 39.0 7.0 40.0 40 29.52401637854169 35.0 22.0 39.0 7.0 40.0 41 29.10802565856108 35.0 21.0 39.0 7.0 40.0 42 29.287954153934052 35.0 21.0 39.0 7.0 40.0 43 29.18593453777366 35.0 21.0 39.0 7.0 40.0 44 29.269477219803147 35.0 21.0 39.0 7.0 40.0 45 29.325837755481878 35.0 21.0 39.0 7.0 40.0 46 29.13635915060121 35.0 20.0 39.0 7.0 40.0 47 29.06689231887947 35.0 20.0 39.0 7.0 40.0 48 28.934816520512133 34.0 20.0 38.0 7.0 40.0 49 29.07970082325545 35.0 20.0 38.0 7.0 40.0 50 29.08920764909061 35.0 20.0 38.0 7.0 40.0 51 27.970496117454573 33.0 20.0 37.0 7.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 4.0 8 8.0 9 32.0 10 44.0 11 45.0 12 57.0 13 62.0 14 103.0 15 187.0 16 326.0 17 635.0 18 1236.0 19 2203.0 20 3507.0 21 5325.0 22 7534.0 23 10683.0 24 15593.0 25 22457.0 26 28426.0 27 30321.0 28 28281.0 29 26178.0 30 26514.0 31 29313.0 32 33648.0 33 38719.0 34 44147.0 35 51297.0 36 56562.0 37 60552.0 38 46851.0 39 6735.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 23.000597314680956 2.6160651678973657 34.45968991576998 39.92364760165171 2 38.455292294640614 12.726611667546766 34.670914237731246 14.147181800081373 3 12.812313339162202 12.908576226875699 59.12515041076205 15.153960023200048 4 11.403516365556584 3.155379727659132 68.35011297038531 17.090990936398974 5 18.94214704329233 3.5478760701888032 59.92780283421488 17.58217405230399 6 14.667970947998995 11.490256845312812 62.58749794402555 11.254274262662639 7 55.00177463057385 1.3116684124414588 41.04071262238458 2.645844334600102 8 54.96766709661781 8.011115247106487 34.14683553070111 2.8743821255745905 9 51.72173792601955 2.8870209579542405 33.72490629084896 11.666334825177247 10 30.892422760286365 17.761195321900672 39.616852930737465 11.729528987075495 11 23.5731537349481 16.286260896664558 46.39871187790542 13.74187349048192 12 18.732827202922515 15.056312057965492 49.39307634374161 16.817784395370378 13 18.138802081078975 15.323632019529592 53.99690088904663 12.540665010344798 14 15.472008448972879 19.37810019304518 49.313088116900545 15.836803241081398 15 13.309902438602112 15.548533982011307 55.49018759143676 15.651375987949825 16 16.144463585446296 17.047187859795528 47.53932321649627 19.2690253382619 17 16.458183643965825 17.222573300899434 50.233298994953124 16.085944060181617 18 16.76567085364059 16.077633595055275 49.56586476449354 17.5908307868106 19 16.427538803812425 18.21913657730031 46.824276946250336 18.529047672636928 20 17.97293904793234 18.84190205770579 50.24680350078343 12.938355393578435 21 17.80846109230676 20.74517170632894 48.0945661677502 13.3518010336141 22 16.068976860548663 15.128682358440749 50.51446973172779 18.28787104928279 23 16.35187894422466 19.97610741276176 49.646372395405 14.025641247608577 24 17.380818407680255 17.46288425080291 47.657401075166426 17.498896266350407 25 15.887531705290131 22.78816104988876 45.52316974990694 15.801137494914169 26 16.172857674627977 16.38183124561753 48.58194032047231 18.863370759282184 27 17.24837036972913 17.404364725538233 47.14492239237515 18.20234251235749 28 14.513707939091217 18.40491009981215 49.11640710891037 17.96497485218626 29 19.40961070664924 17.315027225430025 45.78079416882363 17.494567899097103 30 16.78713955521698 19.41393907390254 47.0822476345473 16.716673736333178 31 20.67661036903659 17.435355835071896 44.46704814010059 17.420985655790922 32 20.1409316377676 22.478249954552144 41.928374178692316 15.452444228987941 33 17.839105932460157 21.29193105776639 40.57584597937966 20.293117030393795 34 20.823774855648953 20.79676584398833 42.48205891773505 15.897400382627666 35 16.693127418475203 23.42321909329363 37.85693880554377 22.026714682687395 36 22.496429097016023 24.894690824727096 35.298700624150555 17.310179454106322 37 18.422050434135233 25.433659115108597 37.143104478128755 19.001185972627404 38 21.79125150410762 25.625838621155328 34.232364067626406 18.35054580711064 39 20.92419297592562 24.500290000605972 36.24747872607495 18.328038297393455 40 20.82896889635292 24.16008033449622 35.513733909294736 19.497216859856124 41 19.3550732792576 26.48354787607019 35.31532155440325 18.846057290268963 42 18.96344261017859 23.771219820459326 37.2428300596449 20.022507509717187 43 21.319459473497407 23.946432126873102 34.26318204246994 20.470926357159552 44 21.80025450799449 22.683414562358788 34.46349887895288 21.052832050693837 45 19.72385016923916 21.94153241514236 34.44757048746072 23.88704692815776 46 22.082637187600092 24.024862141502982 33.45152661513024 20.440974055766684 47 17.22309270496983 23.172000657911823 40.19546906515924 19.409437571959106 48 19.476613831730393 24.621484283698504 34.6664127357878 21.235489148783294 49 18.853502081944647 22.251616645169108 38.14693941151519 20.747941861371054 50 19.08255927698953 22.139252231273318 36.867300916748185 21.910887574988962 51 18.900421582970473 22.02861916427885 35.173697377875115 23.897261874875557 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 70.0 1 924.5 2 1779.0 3 20039.0 4 38299.0 5 28126.0 6 17953.0 7 16980.0 8 16007.0 9 15649.5 10 15292.0 11 14638.0 12 13984.0 13 13115.5 14 12247.0 15 11419.5 16 10592.0 17 9842.5 18 9093.0 19 8438.5 20 7784.0 21 7283.5 22 6783.0 23 6660.5 24 6538.0 25 6584.0 26 6956.0 27 7282.0 28 7685.0 29 8088.0 30 8575.0 31 9062.0 32 10110.5 33 11159.0 34 12081.5 35 13004.0 36 13340.0 37 13676.0 38 14546.5 39 15417.0 40 16102.0 41 16787.0 42 17336.0 43 17885.0 44 19967.0 45 22049.0 46 44377.5 47 66706.0 48 49249.0 49 31792.0 50 30592.5 51 29393.0 52 27352.0 53 25311.0 54 24813.5 55 24316.0 56 24012.5 57 23709.0 58 22226.0 59 20743.0 60 18523.5 61 16304.0 62 14525.5 63 12747.0 64 10961.5 65 9176.0 66 7948.0 67 6720.0 68 5717.5 69 4715.0 70 3878.5 71 3042.0 72 2482.5 73 1923.0 74 1739.0 75 1287.0 76 1019.0 77 767.0 78 515.0 79 372.0 80 229.0 81 179.0 82 129.0 83 85.0 84 41.0 85 33.5 86 26.0 87 17.5 88 9.0 89 7.0 90 5.0 91 2.5 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 577585.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 48.4854372267853 #Duplication Level Percentage of deduplicated Percentage of total 1 79.52772220669615 38.559363828419855 2 6.942212996916759 6.731924649539611 3 3.7416004101943736 5.442393954485802 4 2.5292096953884813 4.905193516765399 5 1.8428845814461934 4.4676532344959945 6 1.402190861730822 4.079150220385305 7 1.0383523314158531 3.5241476748904654 8 0.7619131490271276 2.9553353727533684 9 0.5460661263496308 2.382862940171895 >10 1.5755490484588086 10.995642485403819 >50 0.057050704883396586 1.926247224513392 >100 0.03016056352445265 2.601746329256479 >500 0.0010901408502814209 0.30497886476217 >1k 0.002543661983989982 2.366008766546032 >5k 3.633802834271403E-4 1.5537889129622053 >10k+ 0.0010901408502814209 7.203562024648229 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 18529 3.2080126734593177 No Hit GAATCTGTCTCTTATACACATCTGACGCGCGAATCATCGTATGCCGTCTTC 11563 2.0019564219984938 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCGCGAATCATCGTATGCCG 10794 1.8688158452868409 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCGCGAATCATCGTATGC 8819 1.5268748322757688 No Hit GAACTGTCTCTTATACACATCTGACGCGCGAATCATCGTATGCCGTCTTCT 2948 0.5104010665096912 No Hit GAATGATCTGTCTCTTATACACATCTGACGCGCGAATCATCGTATGCCGTC 2225 0.3852246855441191 No Hit GCTGTCTCTTATACACATCTGACGCGCGAATCATCGTATGCCGTCTTCTGC 1969 0.34090220487027884 No Hit GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCGCGAATCAT 1867 0.3232424664767956 No Hit GAATGACTGTCTCTTATACACATCTGACGCGCGAATCATCGTATGCCGTCT 1725 0.2986573404780249 No Hit GAATGATACGGCGACTGTCTCTTATACACATCTGACGCGCGAATCATCGTA 1574 0.27251400226806444 No Hit GAATGCTGTCTCTTATACACATCTGACGCGCGAATCATCGTATGCCGTCTT 1121 0.19408398763818313 No Hit GAATGATACGGCGACCTGTCTCTTATACACATCTGACGCGCGAATCATCGT 632 0.10942112416354303 No Hit CTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 578 0.10007185089640484 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.04501501943436897 0.0 2 0.0 0.0 0.0 0.44807257806210343 0.0 3 0.0 0.0 0.0 0.5278876702130423 0.0 4 0.0 0.0 0.0 1.1553277872520928 0.0 5 0.0 0.0 0.0 3.529004388964395 0.0 6 0.0 0.0 0.0 3.825757247850966 0.0 7 0.0 0.0 0.0 4.262922340434741 0.0 8 0.0 0.0 0.0 4.796177186041882 0.0 9 0.0 0.0 0.0 4.913562505951505 0.0 10 0.0 0.0 0.0 7.167083632712068 0.0 11 0.0 0.0 0.0 7.318922755957997 0.0 12 0.0 0.0 0.0 9.229290926876564 0.0 13 0.0 0.0 0.0 9.38718976427712 0.0 14 0.0 0.0 0.0 9.502324333215025 0.0 15 0.0 0.0 0.0 9.871620627266982 0.0 16 0.0 0.0 0.0 10.051334435624193 0.0 17 0.0 0.0 0.0 10.157812270055489 0.0 18 0.0 0.0 0.0 10.238146766276826 0.0 19 0.0 0.0 0.0 10.712708951929153 0.0 20 0.0 0.0 0.0 10.824380827064415 0.0 21 0.0 0.0 0.0 10.914410865933153 0.0 22 0.0 0.0 0.0 11.103647082247635 0.0 23 0.0 0.0 0.0 11.19748608429928 0.0 24 0.0 0.0 0.0 11.28059073556273 0.0 25 0.0 0.0 0.0 11.353480440108383 0.0 26 0.0 0.0 0.0 11.449916462512011 0.0 27 0.0 0.0 0.0 11.583230173913796 0.0 28 0.0 0.0 0.0 11.664776612966056 0.0 29 0.0 0.0 0.0 11.764155925101933 0.0 30 0.0 0.0 0.0 11.878078551208914 0.0 31 0.0 0.0 0.0 11.965338435035536 0.0 32 0.0 0.0 0.0 12.079953599903044 0.0 33 0.0 0.0 0.0 12.173100063194163 0.0 34 0.0 0.0 0.0 12.319745145736125 0.0 35 0.0 0.0 0.0 12.454963338729364 0.0 36 0.0 0.0 0.0 12.577023295272557 0.0 37 0.0 0.0 0.0 12.704969831280245 0.0 38 0.0 0.0 0.0 12.871005999117013 0.0 39 0.0 0.0 0.0 13.171740955876624 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TAGCGAC 20 7.0303667E-4 45.000004 30 ACGATAC 20 7.0303667E-4 45.000004 3 CGTTTTT 15110 0.0 44.151226 1 GATACCT 1285 0.0 41.67315 5 CCGATGA 395 0.0 41.582275 18 TGATACC 1295 0.0 41.351353 4 ATACCTG 1310 0.0 40.87786 6 TACGGCT 1030 0.0 40.631065 7 TGATCCG 50 1.0804797E-9 40.5 4 CGATGAA 400 0.0 40.5 19 ACGGCTG 1035 0.0 40.434784 8 GAATCTG 1325 0.0 39.566036 1 TTGTGCG 80 0.0 39.375004 1 CGGCTGT 1085 0.0 39.19355 9 ATGATAC 4190 0.0 39.146782 3 GAATGAT 4330 0.0 39.128178 1 AATGATA 4165 0.0 38.89556 2 CGACCAC 1115 0.0 38.744396 12 TGGGCGA 610 0.0 38.729507 6 CACGACC 215 0.0 38.720932 27 >>END_MODULE