SRR2933283.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2933283.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	427947
Sequences flagged as poor quality	0
Sequence length	51
%GC	37

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	28732	6.713915508228823	No Hit
GAATGATACCTGTCTCTTATACACATCTGACGCGCGAATCATCGTATGCCG	4560	1.0655525100070804	No Hit
GAATCTGTCTCTTATACACATCTGACGCGCGAATCATCGTATGCCGTCTTC	3180	0.743082671452306	No Hit
GAATGATACGGCTGTCTCTTATACACATCTGACGCGCGAATCATCGTATGC	3157	0.7377081741430598	No Hit
GAACTGTCTCTTATACACATCTGACGCGCGAATCATCGTATGCCGTCTTCT	1022	0.23881461956737635	No Hit
GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCGCGAATCAT	800	0.18693903684334742	No Hit
GCTGTCTCTTATACACATCTGACGCGCGAATCATCGTATGCCGTCTTCTGC	761	0.17782575879723422	No Hit
GAATGATCTGTCTCTTATACACATCTGACGCGCGAATCATCGTATGCCGTC	643	0.1502522508628405	No Hit
GAATGATACGGCGACTGTCTCTTATACACATCTGACGCGCGAATCATCGTA	445	0.103984839244112	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CGTATGG	20	7.028319E-4	45.0	2
TACGACA	20	7.028319E-4	45.0	20
CCGCGAA	40	6.7975634E-9	45.0	41
GTACGGG	25	3.886687E-5	45.0	3
CGTTTTT	12580	0.0	44.42766	1
CGGGATA	75	0.0	42.0	6
TCGTTTG	70	0.0	41.785717	1
TGATACC	665	0.0	41.616543	4
TACGGCT	430	0.0	41.337208	7
ACGGCTG	430	0.0	41.337208	8
GATACCT	670	0.0	41.30597	5
GTTTTTT	14090	0.0	40.257275	2
AATGATA	1760	0.0	39.758522	2
ATGATAC	1785	0.0	39.45378	3
GAATGAT	1880	0.0	39.375	1
GTTGGGA	465	0.0	39.19355	4
ATACGGC	1105	0.0	38.687786	6
CGAATAT	35	6.239099E-6	38.57143	14
GATACGG	1115	0.0	38.34081	5
ATACCTG	730	0.0	38.219177	6