##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2933283.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 427947 Sequences flagged as poor quality 0 Sequence length 51 %GC 37 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 28.906871645320564 31.0 28.0 31.0 19.0 33.0 2 29.404351473430122 31.0 30.0 33.0 16.0 34.0 3 29.6027241691144 31.0 30.0 33.0 16.0 34.0 4 32.26348589895478 35.0 32.0 37.0 19.0 37.0 5 33.574372527439145 35.0 33.0 37.0 28.0 37.0 6 33.1432840982645 35.0 33.0 37.0 26.0 37.0 7 31.788693459704124 35.0 30.0 35.0 23.0 37.0 8 33.17874643355369 35.0 33.0 35.0 28.0 37.0 9 32.75442286077482 35.0 31.0 37.0 25.0 39.0 10 31.05641119110544 35.0 27.0 39.0 15.0 39.0 11 31.93217150721935 35.0 27.0 39.0 15.0 39.0 12 32.82496430632765 35.0 31.0 39.0 21.0 39.0 13 32.96363101038213 35.0 31.0 39.0 22.0 39.0 14 33.27740584698572 36.0 31.0 40.0 18.0 41.0 15 33.94919931673782 37.0 32.0 40.0 23.0 41.0 16 34.15049293487277 37.0 32.0 40.0 24.0 41.0 17 32.14150584067653 35.0 27.0 39.0 18.0 41.0 18 32.885083900576475 36.0 30.0 39.0 21.0 39.0 19 32.67758390641832 36.0 30.0 37.0 19.0 39.0 20 32.46336812736157 34.0 30.0 37.0 24.0 39.0 21 32.73356981121494 35.0 31.0 37.0 24.0 39.0 22 32.88885539564479 35.0 30.0 37.0 25.0 39.0 23 34.02202609201607 35.0 33.0 38.0 27.0 40.0 24 32.13545135262077 34.0 30.0 37.0 21.0 39.0 25 31.292470796617337 34.0 29.0 37.0 18.0 39.0 26 30.544611832773686 33.0 25.0 37.0 18.0 39.0 27 32.250872187443775 34.0 30.0 37.0 22.0 39.0 28 32.40157309199504 35.0 31.0 38.0 21.0 39.0 29 32.57348223027618 35.0 31.0 38.0 21.0 40.0 30 31.488539468672524 35.0 29.0 38.0 18.0 40.0 31 31.80356679682297 35.0 30.0 37.0 20.0 40.0 32 31.566553802223172 35.0 30.0 37.0 18.0 40.0 33 31.521153320387803 35.0 30.0 38.0 15.0 40.0 34 30.73287813677862 35.0 29.0 38.0 10.0 40.0 35 30.13743056967335 35.0 26.0 38.0 9.0 40.0 36 29.595805088013236 34.0 24.0 38.0 8.0 40.0 37 29.645432728819223 35.0 24.0 38.0 8.0 40.0 38 29.564189023407103 34.0 24.0 38.0 8.0 40.0 39 29.078166221518085 34.0 23.0 38.0 7.0 40.0 40 28.95151736079468 34.0 23.0 38.0 7.0 40.0 41 28.471100393272998 33.0 21.0 37.0 7.0 40.0 42 28.863212033265803 34.0 22.0 38.0 7.0 40.0 43 28.85875587397505 34.0 22.0 38.0 7.0 40.0 44 28.847735817753133 34.0 22.0 38.0 7.0 40.0 45 29.045996350015304 34.0 23.0 38.0 7.0 40.0 46 28.84611879508444 34.0 22.0 38.0 7.0 40.0 47 28.908640555956694 34.0 23.0 38.0 7.0 40.0 48 28.63343124265388 34.0 22.0 37.0 7.0 40.0 49 28.373445777163994 33.0 22.0 37.0 7.0 39.0 50 28.575758213049745 34.0 22.0 37.0 7.0 39.0 51 27.077481557295645 31.0 20.0 35.0 7.0 38.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 6.0 9 14.0 10 24.0 11 46.0 12 48.0 13 79.0 14 132.0 15 248.0 16 488.0 17 901.0 18 1518.0 19 2553.0 20 3698.0 21 5252.0 22 7273.0 23 10198.0 24 13463.0 25 18169.0 26 22865.0 27 24205.0 28 23978.0 29 24814.0 30 26921.0 31 30053.0 32 33883.0 33 37649.0 34 41900.0 35 44809.0 36 32181.0 37 17088.0 38 3436.0 39 55.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 17.844499435677783 2.6891180449915524 37.75981605198774 41.706566467342924 2 41.18103410001706 7.652816820774536 37.41654924558415 13.749599833624258 3 13.494194374537033 7.6315525053336035 63.59829605067917 15.275957069450188 4 12.16482414878478 3.204368765291029 67.13378058497898 17.49702650094521 5 15.997775425461564 3.6067550420963346 63.01691564609636 17.37855388634574 6 15.133883401449244 7.498825789174828 64.94075200901047 12.426538800365467 7 56.285007255571365 1.3459610652721015 39.55957162919707 2.8094600499594575 8 58.29647129200578 4.843824118407186 34.04860882305519 2.811095766531837 9 54.12936648697152 2.8727856486901415 34.37061131401786 8.627236550320484 10 29.826357002152136 18.31418376574669 40.1811439267012 11.678315305399968 11 21.935660256994442 17.065898347225243 47.57247976969111 13.425961626089212 12 18.635017887729088 15.708720939742538 50.18565383096505 15.470607341563325 13 17.32340687047695 15.722507693709737 53.82302014034448 13.13106529546883 14 15.212631470719504 16.5973823861366 51.54680369298067 16.64318245016322 15 13.69001301563044 15.876732399105498 54.7287397738505 15.704514811413564 16 16.062503066968574 15.790740442157558 49.78303388036369 18.36372261051018 17 16.551348648313926 15.90313753805962 50.913547705673835 16.63196610795262 18 16.536393525366456 15.416628694674808 50.72380458327783 17.323173196680898 19 16.853722540408043 17.697752291755755 48.04870696604953 17.399818201786672 20 17.71925028099274 18.4151308456421 50.18401811439267 13.68160075897249 21 18.321427653424372 18.588049454722196 48.7114058516592 14.379117040194231 22 16.563499685708745 15.901268147691185 50.24173554201805 17.293496624582016 23 16.410443349293256 19.064042977284572 49.4203721488876 15.105141524534579 24 16.322348328180826 17.128990272159868 49.296291363182824 17.25237003647648 25 16.28028704489107 19.13110735675212 47.28272426258392 17.305881335772888 26 16.211820622647195 17.471556057175306 48.687337450665616 17.62928586951188 27 15.7344250573085 17.34233444795734 48.95816538029242 17.965075114441742 28 14.978256653277159 17.868567836671364 49.75569404622535 17.39748146382613 29 17.869268858059524 17.26639046423973 47.321046765136806 17.54329391256394 30 16.88293176491481 18.148275370548223 48.10619071987886 16.8626021446581 31 18.656048529373965 18.0800426221004 46.45575269834816 16.808156150177474 32 18.869860052763542 20.760514736637948 44.43260497211104 15.937020238487476 33 17.35074670461529 20.472161272307083 43.27919111478758 18.897900908290044 34 19.230886067667257 20.95773542050768 43.363781028959195 16.44759748286587 35 16.826149032473648 23.15683951517361 40.01406716252246 20.002944289830282 36 20.717285084367923 23.2680682420954 38.1007461204308 17.913900553105876 37 18.671237326117488 24.685299815164026 38.62721318294088 18.01624967577761 38 20.293634492121686 24.46377705650466 37.90586217452161 17.33672627685204 39 19.52531505069553 23.840335368632097 38.40662511946572 18.227724461206645 40 19.984016712349895 23.603156465637102 37.963813275943046 18.449013546069956 41 18.711896566630916 24.621039521249127 38.26992594877403 18.397137963345926 42 18.404381851023608 23.577686021867194 38.615295819342116 19.402636307767082 43 19.78399194292751 23.446595022280796 37.45276868397255 19.316644350819143 44 20.456738801767507 22.71426134544698 37.05435486170016 19.774644991085346 45 19.034833752777796 22.203684101068593 37.08730286694381 21.67417927920981 46 19.76716742961161 23.366211236438154 36.81554024213279 20.051081091817444 47 17.577877634379956 22.750013436243275 40.802716224205334 18.869392705171435 48 18.75746295686148 23.48141241789287 37.59881480650641 20.162309818739235 49 18.408120631760475 22.273318892292735 38.94500954557457 20.373550930372218 50 18.309276616029553 21.92841636931676 38.95739425676544 20.804912757888243 51 18.173512140522075 22.02282058292265 37.779210977060245 22.024456299495032 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 100.0 1 476.5 2 853.0 3 20954.5 4 41056.0 5 27329.0 6 13602.0 7 12672.0 8 11742.0 9 11435.5 10 11129.0 11 10593.0 12 10057.0 13 9421.0 14 8785.0 15 8140.0 16 7495.0 17 6981.0 18 6467.0 19 6016.0 20 5565.0 21 5071.0 22 4577.0 23 4497.5 24 4418.0 25 4393.5 26 4550.0 27 4731.0 28 4996.5 29 5262.0 30 5737.0 31 6212.0 32 7202.0 33 8192.0 34 9001.5 35 9811.0 36 10101.0 37 10391.0 38 11125.5 39 11860.0 40 12294.5 41 12729.0 42 13239.0 43 13749.0 44 15327.0 45 16905.0 46 24871.0 47 32837.0 48 28896.5 49 24956.0 50 24331.5 51 23707.0 52 21603.0 53 19499.0 54 18530.5 55 17562.0 56 17096.5 57 16631.0 58 15833.0 59 15035.0 60 13626.5 61 12218.0 62 11151.5 63 10085.0 64 8747.5 65 7410.0 66 6510.0 67 5610.0 68 4872.5 69 4135.0 70 3515.5 71 2896.0 72 2393.5 73 1891.0 74 1667.0 75 1246.0 76 1049.0 77 766.0 78 483.0 79 355.0 80 227.0 81 170.0 82 113.0 83 78.5 84 44.0 85 44.0 86 44.0 87 26.5 88 9.0 89 6.0 90 3.0 91 2.5 92 2.0 93 1.5 94 1.0 95 0.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 427947.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 49.681071240801835 #Duplication Level Percentage of deduplicated Percentage of total 1 78.6135636524729 39.05606056311816 2 7.921359271367895 7.870832285696289 3 3.9871505182065183 5.9425772682845395 4 2.5268871052814417 5.021538331798032 5 1.8291819673224585 4.543785981546855 6 1.3653736777404215 4.069993617248248 7 0.9359930782540178 3.255079716114468 8 0.703161870403814 2.7947067981877876 9 0.5305154201381973 2.3720916944006727 >10 1.5075232409706927 10.663659785895627 >50 0.04949630531930399 1.7389874431800911 >100 0.025949519293590347 2.4394527312467646 >500 0.0014416399607550191 0.5261845585895352 >1k 0.0019221866143400259 2.8455507050039337 >5k 0.0 0.0 >10k+ 4.8054665358500647E-4 6.859498519688985 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 28732 6.713915508228823 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCGCGAATCATCGTATGCCG 4560 1.0655525100070804 No Hit GAATCTGTCTCTTATACACATCTGACGCGCGAATCATCGTATGCCGTCTTC 3180 0.743082671452306 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCGCGAATCATCGTATGC 3157 0.7377081741430598 No Hit GAACTGTCTCTTATACACATCTGACGCGCGAATCATCGTATGCCGTCTTCT 1022 0.23881461956737635 No Hit GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCGCGAATCAT 800 0.18693903684334742 No Hit GCTGTCTCTTATACACATCTGACGCGCGAATCATCGTATGCCGTCTTCTGC 761 0.17782575879723422 No Hit GAATGATCTGTCTCTTATACACATCTGACGCGCGAATCATCGTATGCCGTC 643 0.1502522508628405 No Hit GAATGATACGGCGACTGTCTCTTATACACATCTGACGCGCGAATCATCGTA 445 0.103984839244112 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 2.336737960541843E-4 0.0 0.0 0.046267411618728486 0.0 2 2.336737960541843E-4 0.0 0.0 0.32831168345612893 0.0 3 2.336737960541843E-4 0.0 0.0 0.4339322392726202 0.0 4 2.336737960541843E-4 0.0 0.0 0.8578165053149105 0.0 5 2.336737960541843E-4 0.0 0.0 1.894627138407326 0.0 6 2.336737960541843E-4 0.0 0.0 2.2091520678962584 0.0 7 2.336737960541843E-4 0.0 0.0 2.5038147247205846 0.0 8 2.336737960541843E-4 0.0 0.0 2.922791841045737 0.0 9 2.336737960541843E-4 0.0 0.0 3.148520728034079 0.0 10 2.336737960541843E-4 0.0 0.0 4.652678953234863 0.0 11 2.336737960541843E-4 0.0 0.0 5.078432609645587 0.0 12 2.336737960541843E-4 0.0 0.0 6.242361787791479 0.0 13 2.336737960541843E-4 0.0 0.0 6.395651798003024 0.0 14 2.336737960541843E-4 0.0 0.0 6.49987031104319 0.0 15 2.336737960541843E-4 0.0 0.0 6.740320647182946 0.0 16 2.336737960541843E-4 0.0 0.0 6.880992272407564 0.0 17 2.336737960541843E-4 0.0 0.0 7.035917999191489 0.0 18 2.336737960541843E-4 0.0 0.0 7.177757993396378 0.0 19 2.336737960541843E-4 0.0 0.0 7.533643184786901 0.0 20 2.336737960541843E-4 0.0 0.0 7.693242387491909 0.0 21 2.336737960541843E-4 0.0 0.0 7.857047718525892 0.0 22 2.336737960541843E-4 0.0 0.0 8.077869455797096 0.0 23 2.336737960541843E-4 0.0 0.0 8.248217653120596 0.0 24 2.336737960541843E-4 0.0 0.0 8.391226016305758 0.0 25 2.336737960541843E-4 0.0 0.0 8.514372106826313 0.0 26 2.336737960541843E-4 0.0 0.0 8.637518197346868 0.0 27 2.336737960541843E-4 0.0 0.0 8.785433710249166 0.0 28 2.336737960541843E-4 0.0 0.0 8.906476736605233 0.0 29 2.336737960541843E-4 0.0 0.0 9.049718773586449 0.0 30 2.336737960541843E-4 0.0 0.0 9.220066970909949 0.0 31 2.336737960541843E-4 0.0 0.0 9.359570227154297 0.0 32 2.336737960541843E-4 0.0 0.0 9.49323163849729 0.0 33 2.336737960541843E-4 0.0 0.0 9.628295092616609 0.0 34 2.336737960541843E-4 0.0 0.0 9.782519798012371 0.0 35 2.336737960541843E-4 0.0 0.0 9.964084337546472 0.0 36 2.336737960541843E-4 0.0 0.0 10.10919576489612 0.0 37 2.336737960541843E-4 0.0 0.0 10.26108373233134 0.0 38 2.336737960541843E-4 0.0 0.0 10.46204319693794 0.0 39 2.336737960541843E-4 0.0 0.0 10.82400390702587 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTATGG 20 7.028319E-4 45.0 2 TACGACA 20 7.028319E-4 45.0 20 CCGCGAA 40 6.7975634E-9 45.0 41 GTACGGG 25 3.886687E-5 45.0 3 CGTTTTT 12580 0.0 44.42766 1 CGGGATA 75 0.0 42.0 6 TCGTTTG 70 0.0 41.785717 1 TGATACC 665 0.0 41.616543 4 TACGGCT 430 0.0 41.337208 7 ACGGCTG 430 0.0 41.337208 8 GATACCT 670 0.0 41.30597 5 GTTTTTT 14090 0.0 40.257275 2 AATGATA 1760 0.0 39.758522 2 ATGATAC 1785 0.0 39.45378 3 GAATGAT 1880 0.0 39.375 1 GTTGGGA 465 0.0 39.19355 4 ATACGGC 1105 0.0 38.687786 6 CGAATAT 35 6.239099E-6 38.57143 14 GATACGG 1115 0.0 38.34081 5 ATACCTG 730 0.0 38.219177 6 >>END_MODULE