##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2933280.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 614958 Sequences flagged as poor quality 0 Sequence length 51 %GC 36 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 29.47506333765883 31.0 28.0 33.0 25.0 34.0 2 28.700594186920082 31.0 28.0 33.0 16.0 34.0 3 28.69177244624836 31.0 28.0 34.0 16.0 34.0 4 33.178898396313244 35.0 32.0 37.0 28.0 37.0 5 34.25131635005968 35.0 33.0 37.0 30.0 37.0 6 33.73216707482462 35.0 33.0 37.0 28.0 37.0 7 33.64420659622283 35.0 33.0 37.0 29.0 37.0 8 33.61030184175179 35.0 33.0 37.0 28.0 37.0 9 34.760502343249456 37.0 34.0 39.0 28.0 39.0 10 34.53395679054505 37.0 32.0 39.0 27.0 39.0 11 34.93476952897596 37.0 34.0 39.0 27.0 39.0 12 35.06133589610998 37.0 34.0 39.0 27.0 39.0 13 35.26128938886883 37.0 34.0 39.0 30.0 39.0 14 36.064643439064135 38.0 34.0 40.0 29.0 41.0 15 36.40952878082731 38.0 34.0 40.0 30.0 41.0 16 36.30919997788467 38.0 34.0 40.0 30.0 41.0 17 35.595917119543124 38.0 33.0 40.0 27.0 41.0 18 35.35731545894191 38.0 33.0 39.0 27.0 40.0 19 34.71252996139574 37.0 33.0 38.0 27.0 40.0 20 33.94249363371157 35.0 32.0 38.0 27.0 40.0 21 34.27064287317182 35.0 33.0 38.0 27.0 40.0 22 34.77196166242248 35.0 33.0 39.0 29.0 40.0 23 35.09668139938012 35.0 33.0 39.0 30.0 40.0 24 34.55116934815061 35.0 33.0 39.0 27.0 40.0 25 33.55234015981579 35.0 33.0 38.0 24.0 40.0 26 33.566232165448696 35.0 32.0 38.0 24.0 40.0 27 34.36526559537399 35.0 33.0 38.0 27.0 40.0 28 34.082701582872325 35.0 33.0 39.0 25.0 40.0 29 34.00200338884932 35.0 33.0 39.0 24.0 40.0 30 33.32952169091222 35.0 33.0 39.0 21.0 40.0 31 33.24592411189057 35.0 33.0 39.0 21.0 40.0 32 32.56774283772225 35.0 31.0 39.0 17.0 40.0 33 31.77950201477174 35.0 30.0 39.0 12.0 40.0 34 31.117695842642913 35.0 28.0 39.0 8.0 40.0 35 30.656500118707292 35.0 24.0 40.0 7.0 41.0 36 30.062178230057988 35.0 22.0 40.0 7.0 41.0 37 30.017539409195425 35.0 22.0 40.0 7.0 41.0 38 29.729617307198215 35.0 21.0 39.0 7.0 40.0 39 29.41618126766381 35.0 21.0 39.0 7.0 40.0 40 29.1971809456906 35.0 20.0 39.0 7.0 40.0 41 28.881720377651806 35.0 18.0 39.0 7.0 40.0 42 29.027715713918674 35.0 18.0 39.0 7.0 40.0 43 28.939143811447284 35.0 18.0 39.0 7.0 40.0 44 29.031398892282073 35.0 18.0 39.0 7.0 40.0 45 29.12644603371287 35.0 19.0 39.0 7.0 40.0 46 28.88414493347513 35.0 18.0 39.0 7.0 40.0 47 28.800814039332767 35.0 18.0 39.0 7.0 40.0 48 28.66659836931953 35.0 18.0 39.0 7.0 40.0 49 28.80558834912303 35.0 18.0 39.0 7.0 40.0 50 28.76472214362607 35.0 18.0 39.0 7.0 40.0 51 27.64963298306551 33.0 18.0 38.0 7.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 2.0 8 10.0 9 25.0 10 33.0 11 33.0 12 44.0 13 80.0 14 85.0 15 191.0 16 321.0 17 680.0 18 1394.0 19 2384.0 20 4011.0 21 6141.0 22 8863.0 23 12727.0 24 18920.0 25 27733.0 26 34372.0 27 33113.0 28 27992.0 29 24766.0 30 25143.0 31 28272.0 32 32983.0 33 39506.0 34 45825.0 35 54803.0 36 61650.0 37 65094.0 38 50261.0 39 7501.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 24.878284370639946 2.423092308743036 33.49025461901463 39.20836870160239 2 38.79793416786187 15.66903756028867 31.700538898591446 13.832489373258012 3 10.559095092672996 15.828235424207831 59.203555364756625 14.409114118362554 4 9.778553982548402 2.5591991648210124 71.8302713356034 15.83197551702718 5 19.368965035010522 3.0806981940230065 60.79520877848569 16.755127992480787 6 12.678426819392543 12.920394563531168 64.16714637422393 10.234032242852358 7 51.84549188725084 0.9870592788450594 44.719476777275844 2.4479720566282577 8 51.052266984086714 9.15395848171745 36.800399376868015 2.993375157327818 9 48.01596206570205 2.3977247226639866 35.49884707573525 14.087466135898714 10 28.307786873249878 14.30959512682167 44.03780420776703 13.344813792161418 11 21.709612688996646 16.154111337684853 47.62910637799654 14.507169595321956 12 16.175413605482 14.234305432240902 51.98387532156667 17.606405640710424 13 15.966944083986224 14.954191993599563 57.43936984314376 11.639494079270454 14 14.701979647390553 20.517986594206434 49.6144452141447 15.165588544258307 15 12.329785123536892 15.94092604698207 57.85126789146576 13.878020938015279 16 13.843221813522225 17.929029299561922 48.53778632036659 19.68996256654926 17 14.440335762767539 18.059607322776515 52.138194803547556 15.361862110908387 18 14.713037313117319 17.54379973916918 51.162355803160544 16.58080714455296 19 14.61530706162047 19.725086916504868 47.751228539184794 17.908377482689875 20 16.19037397675939 19.129924320034863 52.58554242728771 12.094159275918031 21 16.267777636846745 21.798074014810766 49.83055753401045 12.103590814332035 22 14.429440709772049 15.154368265800267 51.69702646359588 18.719164560831796 23 14.822150455803484 20.79572913922577 50.99958045915331 13.382539945817436 24 16.977094370672468 17.484933930447284 48.19174642821136 17.346225270668892 25 13.663534745462291 25.03699439636528 46.54350378399826 14.755967074174169 26 13.990874173520792 17.242640960846106 50.69110410792281 18.07538075771028 27 17.146699449393292 18.16042721616761 47.20419931117247 17.48867402326663 28 12.768676885250699 19.27432442540791 51.174063919812404 16.782934769528975 29 16.920342527457162 19.817776173332163 46.764982323996115 16.496898975214567 30 13.988434982551654 20.840447640326655 48.29711947807817 16.87399789904351 31 16.558203974905602 16.794968111643396 48.74918287102534 17.897645042425662 32 21.275599309221118 20.74109126151705 43.63940301614094 14.343906413120896 33 15.98320535711382 21.284868234903847 41.728378198185894 21.003548209796442 34 17.955535174759902 23.179957005193852 43.82998513719636 15.034522682849886 35 19.048780567128162 21.86084252908329 38.07154309725217 21.01883380653638 36 16.8510695039336 24.077091443643305 38.417420376676134 20.65441867574696 37 19.577597169237574 22.802370243171076 38.82135040116561 18.79868218642574 38 19.07414815320721 25.62223761622745 36.638437096517166 18.66517713404818 39 22.33941179722843 22.27778157207484 37.57280985042881 17.80999678026792 40 21.42032464005672 24.484273722758303 36.87845348788048 17.216948149304507 41 17.93911128890103 25.020895735968963 36.36215806607931 20.6778349090507 42 20.050800217250607 23.22711469726388 39.181049762748025 17.54103532273749 43 20.462698265572605 22.787572484624967 34.50886076772723 22.2408684820752 44 20.318298160199557 22.836356304007754 34.56122206719808 22.2841234685946 45 18.03489018762257 22.26851264639211 35.92212801524657 23.77446915073875 46 23.102715957837773 24.47581786073195 33.069575483203735 19.351890698226544 47 16.797732528075088 22.982219923962287 40.95108934268682 19.26895820527581 48 19.35335421280803 24.045381961044495 34.07484738795169 22.526416438195778 49 18.728433486514525 21.998087674280196 38.550437590859865 20.723041248345417 50 18.8598245733855 21.557732397984903 36.56184650008619 23.020596528543415 51 18.671031192374112 22.161025631018706 34.29843989345614 24.869503283151044 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 45.0 1 801.5 2 1558.0 3 18833.5 4 36109.0 5 27168.5 6 18228.0 7 17544.5 8 16861.0 9 16649.0 10 16437.0 11 16173.0 12 15909.0 13 15314.5 14 14720.0 15 14125.0 16 13530.0 17 12867.5 18 12205.0 19 11423.0 20 10641.0 21 10083.0 22 9525.0 23 9058.5 24 8592.0 25 8508.0 26 8371.5 27 8319.0 28 8637.5 29 8956.0 30 9580.0 31 10204.0 32 10923.0 33 11642.0 34 12724.5 35 13807.0 36 14747.5 37 15688.0 38 16624.0 39 17560.0 40 18954.5 41 20349.0 42 21351.0 43 22353.0 44 24679.5 45 27006.0 46 58114.0 47 89222.0 48 63737.0 49 38252.0 50 34713.5 51 31175.0 52 27780.0 53 24385.0 54 23055.0 55 21725.0 56 20559.0 57 19393.0 58 17620.0 59 15847.0 60 13969.0 61 12091.0 62 10310.5 63 8530.0 64 7129.5 65 5729.0 66 4735.5 67 3742.0 68 3023.0 69 2304.0 70 1935.0 71 1566.0 72 1229.5 73 893.0 74 760.0 75 508.0 76 389.0 77 302.5 78 216.0 79 169.0 80 122.0 81 75.5 82 29.0 83 26.5 84 24.0 85 19.5 86 15.0 87 10.0 88 5.0 89 4.0 90 3.0 91 3.0 92 3.0 93 2.0 94 1.0 95 1.5 96 2.0 97 1.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 614958.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 56.66728255826605 #Duplication Level Percentage of deduplicated Percentage of total 1 81.90006281988724 46.4105400135429 2 8.563325847368374 9.705208108626532 3 4.041721456767135 6.871001154372898 4 2.1714849162274614 4.922085972754969 5 1.2351831615728552 3.4997236614030687 6 0.7111446504692579 2.417918090876447 7 0.4092648371885538 1.623434831908857 8 0.2562346281833915 1.1616096061184389 9 0.1592101493039838 0.8119805865077317 >10 0.4849477005156413 4.697718880858224 >50 0.03748775563720162 1.4511308768158842 >100 0.025282433868599283 2.6870288395198236 >500 0.001453013440723925 0.5162612865045105 >1k 0.002034218817013495 2.981470683305953 >5k 0.0 0.0 >10k+ 0.0011624107525791399 10.24288740688375 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GAATCTGTCTCTTATACACATCTGACGCACTGATGCTCGTATGCCGTCTTC 18200 2.9595517092224184 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 18181 2.956462067328175 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCACTGATGCTCGTATGCCG 14946 2.430409881650454 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCACTGATGCTCGTATGC 10873 1.768088227163481 No Hit GAACTGTCTCTTATACACATCTGACGCACTGATGCTCGTATGCCGTCTTCT 3787 0.6158144133420493 No Hit GAATGATCTGTCTCTTATACACATCTGACGCACTGATGCTCGTATGCCGTC 3047 0.49548099219784114 No Hit GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCACTGATGCT 2600 0.4227931013174884 No Hit GCTGTCTCTTATACACATCTGACGCACTGATGCTCGTATGCCGTCTTCTGC 2578 0.41921562122941725 Illumina Single End Adapter 1 (95% over 21bp) GAATGACTGTCTCTTATACACATCTGACGCACTGATGCTCGTATGCCGTCT 2306 0.37498495832235695 No Hit GAATGCTGTCTCTTATACACATCTGACGCACTGATGCTCGTATGCCGTCTT 1926 0.3131921204374933 No Hit GAATGATACGGCGACTGTCTCTTATACACATCTGACGCACTGATGCTCGTA 1861 0.30262229290455606 No Hit GAATGATACGGCGACCTGTCTCTTATACACATCTGACGCACTGATGCTCGT 937 0.15236812920557175 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.049434270307890944 0.0 2 0.0 0.0 0.0 0.5507693208316665 0.0 3 0.0 0.0 0.0 0.6519144396853118 0.0 4 0.0 0.0 0.0 1.4171699530699657 0.0 5 0.0 0.0 0.0 4.969282455061972 0.0 6 0.0 0.0 0.0 5.468828765541712 0.0 7 0.0 0.0 0.0 6.032119266681627 0.0 8 0.0 0.0 0.0 6.745013480595423 0.0 9 0.0 0.0 0.0 6.9006338644265135 0.0 10 0.0 0.0 0.0 9.902790109243233 0.0 11 0.0 0.0 0.0 10.102641155981384 0.0 12 0.0 0.0 0.0 12.356941449659978 0.0 13 0.0 0.0 0.0 12.569313676706377 0.0 14 0.0 0.0 0.0 12.720868742255568 0.0 15 0.0 0.0 0.0 13.14317400537923 0.0 16 0.0 0.0 0.0 13.398475993482482 0.0 17 0.0 0.0 0.0 13.544177000705739 0.0 18 0.0 0.0 0.0 13.644021217709177 0.0 19 0.0 0.0 0.0 14.28260141342986 0.0 20 0.0 0.0 0.0 14.416756916732524 0.0 21 0.0 0.0 0.0 14.521154290211689 0.0 22 0.0 0.0 0.0 14.716289567742837 0.0 23 0.0 0.0 0.0 14.829793254173456 0.0 24 0.0 0.0 0.0 14.931100985758377 0.0 25 0.0 0.0 0.0 15.014846542365495 0.0 26 0.0 0.0 0.0 15.13648086535991 0.0 27 0.0 0.0 0.0 15.30706162046839 0.0 28 0.0 0.0 0.0 15.407393675665656 0.0 29 0.0 0.0 0.0 15.516018980157995 0.0 30 0.0 0.0 0.0 15.631799244826476 0.0 31 0.0 0.0 0.0 15.744002029406886 0.0 32 0.0 0.0 0.0 15.876694018128067 0.0 33 0.0 0.0 0.0 15.997515277466103 0.0 34 0.0 0.0 0.0 16.138663128213633 0.0 35 0.0 0.0 0.0 16.284364135436892 0.0 36 0.0 0.0 0.0 16.42876424080994 0.0 37 0.0 0.0 0.0 16.579506242702752 0.0 38 0.0 0.0 0.0 16.742281586709986 0.0 39 0.0 0.0 0.0 16.954003362831283 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GATACGC 50 2.1827873E-11 45.0 5 TCGTTAG 20 7.030725E-4 45.0 1 CGACGAA 25 3.888683E-5 45.0 19 CTACGGC 20 7.030725E-4 45.0 6 ACTACCG 25 3.888683E-5 45.0 14 CTACCGA 20 7.030725E-4 45.0 15 CGTTTTT 17555 0.0 44.44888 1 CGCTTTT 355 0.0 43.09859 1 GATACCT 1675 0.0 42.179104 5 TGATACC 1690 0.0 42.071007 4 TACGGCT 1355 0.0 42.011066 7 ACGGCTG 1365 0.0 41.703297 8 CGACCTG 120 0.0 41.250004 12 CGGCTGT 1400 0.0 41.142857 9 AATCTGT 2125 0.0 40.55294 2 CGGTAGT 50 1.0804797E-9 40.5 12 ATACCTG 1760 0.0 40.397728 6 GCGACCT 145 0.0 40.344826 11 GAATCTG 2160 0.0 40.104164 1 CGATGAA 455 0.0 39.56044 19 >>END_MODULE