##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2933270.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 741288 Sequences flagged as poor quality 0 Sequence length 51 %GC 35 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 29.42375298129742 31.0 28.0 33.0 25.0 34.0 2 28.50058681646 31.0 27.0 33.0 16.0 34.0 3 28.489867635790677 31.0 26.0 33.0 16.0 34.0 4 33.14178834676941 35.0 32.0 37.0 28.0 37.0 5 34.292292604224 35.0 33.0 37.0 30.0 37.0 6 33.66692972232115 35.0 33.0 37.0 28.0 37.0 7 33.79028663623315 35.0 33.0 37.0 29.0 37.0 8 33.574311198886264 35.0 33.0 37.0 28.0 37.0 9 34.86554618447891 37.0 34.0 39.0 28.0 39.0 10 34.758343585758844 37.0 33.0 39.0 28.0 39.0 11 35.25734802128188 37.0 34.0 39.0 30.0 39.0 12 35.37805684160542 37.0 34.0 39.0 30.0 39.0 13 35.5733156344093 37.0 34.0 39.0 30.0 39.0 14 36.42311490270988 38.0 35.0 40.0 30.0 41.0 15 36.65454856951684 38.0 35.0 40.0 30.0 41.0 16 36.58540000647522 38.0 34.0 41.0 31.0 41.0 17 35.835676552163264 38.0 34.0 40.0 27.0 41.0 18 35.53868267124248 38.0 34.0 39.0 28.0 40.0 19 34.8596969059259 37.0 34.0 38.0 27.0 40.0 20 33.8446379814593 35.0 32.0 37.0 27.0 40.0 21 34.324482522312515 35.0 33.0 38.0 28.0 40.0 22 34.71400589244666 35.0 33.0 38.0 29.0 40.0 23 34.98551709996654 35.0 33.0 39.0 30.0 40.0 24 34.465754200796454 35.0 33.0 38.0 27.0 40.0 25 33.53067633632273 35.0 33.0 38.0 24.0 40.0 26 33.444152610051695 35.0 32.0 38.0 24.0 40.0 27 34.25549044366022 35.0 33.0 38.0 27.0 40.0 28 33.841751114276775 35.0 33.0 39.0 24.0 40.0 29 33.80519717033056 35.0 33.0 39.0 24.0 40.0 30 33.01010538414219 35.0 32.0 38.0 21.0 40.0 31 32.79758339538749 35.0 32.0 38.0 20.0 40.0 32 31.931122586632995 35.0 31.0 38.0 15.0 40.0 33 30.941538241547146 35.0 27.0 39.0 10.0 40.0 34 30.14137959875244 35.0 23.0 39.0 7.0 40.0 35 29.532841486709618 35.0 20.0 39.0 7.0 40.0 36 28.851685174992717 35.0 18.0 39.0 7.0 40.0 37 28.729076957943473 35.0 15.0 39.0 7.0 40.0 38 28.532421946665803 35.0 15.0 39.0 7.0 40.0 39 28.206798167513842 35.0 15.0 39.0 7.0 40.0 40 28.078668479727177 35.0 15.0 39.0 7.0 40.0 41 27.69423489925643 34.0 15.0 39.0 7.0 40.0 42 27.88073731127443 35.0 15.0 39.0 7.0 40.0 43 27.861733900993947 35.0 15.0 39.0 7.0 40.0 44 27.902515621458868 35.0 13.0 39.0 7.0 40.0 45 28.044098919718113 35.0 13.0 39.0 7.0 40.0 46 27.80869918304357 35.0 12.0 39.0 7.0 40.0 47 27.71504732303774 35.0 12.0 39.0 7.0 40.0 48 27.591950766773508 34.0 12.0 38.0 7.0 40.0 49 27.707375540950345 35.0 12.0 39.0 7.0 40.0 50 27.728075997453082 35.0 12.0 39.0 7.0 40.0 51 26.533690009820745 33.0 10.0 38.0 7.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 2.0 8 4.0 9 16.0 10 22.0 11 33.0 12 64.0 13 91.0 14 141.0 15 225.0 16 371.0 17 881.0 18 1818.0 19 3459.0 20 5545.0 21 8551.0 22 12493.0 23 18513.0 24 27518.0 25 39885.0 26 48038.0 27 43861.0 28 34926.0 29 29205.0 30 28684.0 31 31570.0 32 37567.0 33 44145.0 34 52673.0 35 62619.0 36 70477.0 37 72831.0 38 56860.0 39 8200.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 26.460970634894938 2.0948673120298724 29.09409028609663 42.35007176697856 2 41.53824154714497 17.815073223902182 28.196733253472335 12.449951975480515 3 9.305290251562145 17.905591349111276 59.86000043168107 12.929117967645503 4 8.667616365029517 2.252430904048089 75.06043535036315 14.019517380559243 5 19.812542493605726 2.731192195206182 62.138197299834886 15.318068011353212 6 10.925308382167255 14.503135083800089 65.4026505217945 9.168906012238159 7 46.32032354496498 0.7992844886198077 50.496028534119 2.3843634322962193 8 45.163957867927174 10.586708539730846 40.98434076903983 3.2649928233021446 9 42.47593378012324 2.0535878093264697 39.68147332750564 15.789005083044646 10 25.403217103204152 11.087458585596961 49.22594187414338 14.283382437055502 11 19.754265548612686 14.83202210207099 50.862687646366865 14.55102470294946 12 13.729886359957263 12.761436850454885 55.654347568016746 17.854329221571103 13 14.051488760104036 13.87544382210423 61.71960155836867 10.353465859423059 14 13.097743387185549 20.174614994442106 52.05075490227819 14.67688671609415 15 10.341324829216175 15.07133529748222 61.404069673325345 13.183270199976258 16 11.051844896990104 16.63698859282762 51.560661982927016 20.750504527255266 17 11.763174366777825 17.56456330063349 55.83066230668782 14.841600025900863 18 12.075603544101618 16.723459707967752 54.583778504440915 16.617158243489712 19 12.334477288179494 19.11564735973063 50.62836576337402 17.921509588715857 20 14.21228996017742 17.135445332987988 57.00591403071411 11.646350676120482 21 14.329248551170396 21.16910026872147 52.7367231089671 11.764928071141041 22 12.370900378800142 13.816087674426134 54.48030994701115 19.332701999762573 23 12.992521125392559 20.54909832615664 53.473413841853635 12.984966706597165 24 15.503690873182894 15.832442991118162 51.144224646830914 17.519641488868025 25 11.34471352564725 24.981383753682778 49.53918045348097 14.134722267189002 26 12.527384768133304 15.258037361996957 55.13538597684031 17.07919189302943 27 16.919065194634204 17.104688056463885 49.588688876657926 16.387557872243985 28 11.566489677426317 16.920144397319262 55.76294233820054 15.750423587053886 29 16.286787321526855 14.667038991593012 53.36778687905376 15.678386807826378 30 15.944814970699648 19.390169542741823 51.258889932118144 13.40612555444038 31 14.43501041430591 15.757438404506752 51.93069360356568 17.876857577621653 32 16.16901932852009 22.093707169143435 46.35903994129137 15.378233561045098 33 13.955035020127129 16.84986132245497 43.38934395268775 25.805759704730146 34 15.524465524870227 19.088802192939855 48.1876139907836 17.19911829140631 35 17.24107229578787 20.03243004068594 38.47802743333225 24.248470230193934 36 15.385248378497964 19.347271236010837 42.109004867204106 23.158475518287087 37 17.395802980757814 24.866583568059916 39.95909821823636 17.7785152329459 38 17.100506146059292 22.024098595957305 37.14939402769234 23.72600123029106 39 19.083675980185838 24.08591532575733 39.06335998963966 17.767048704417178 40 17.59032926473921 21.890142562674697 37.38762802041852 23.131900152167578 41 17.196420284693666 24.539720054823498 37.19957695254746 21.064282707935376 42 16.753407582478065 23.019797973257358 39.94965519474212 20.277139249522453 43 19.53181489515546 21.589854415557785 35.46583783900454 23.412492850282213 44 20.644742664119747 22.543599788476275 34.925696895133875 21.885960652270104 45 16.68420371029883 21.652717971962314 36.978070601439654 24.685007716299197 46 22.174377569851394 24.878184996924272 33.50276815488717 19.444669278337166 47 16.396191493724434 20.947593917613666 42.18009734408219 20.476117244579704 48 19.7804362137253 22.952617606112604 34.23514207703349 23.031804103128607 49 16.960344697337607 21.209435469075448 39.501920980779396 22.328298852807546 50 18.472172758765822 20.399898554947605 37.18136540723713 23.94656327904944 51 18.90331423144581 20.83953874877241 34.846915099124764 25.41023192065702 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 62.0 1 812.0 2 1562.0 3 20614.0 4 39666.0 5 31048.0 6 22430.0 7 22039.5 8 21649.0 9 21815.0 10 21981.0 11 21876.0 12 21771.0 13 21355.5 14 20940.0 15 20189.5 16 19439.0 17 18758.0 18 18077.0 19 17257.0 20 16437.0 21 15376.0 22 14315.0 23 13636.0 24 12957.0 25 12529.5 26 11605.0 27 11108.0 28 11188.5 29 11269.0 30 11636.0 31 12003.0 32 12625.0 33 13247.0 34 14372.0 35 15497.0 36 16362.5 37 17228.0 38 18533.5 39 19839.0 40 21103.5 41 22368.0 42 23828.0 43 25288.0 44 28001.0 45 30714.0 46 76209.0 47 121704.0 48 83581.5 49 45459.0 50 41677.5 51 37896.0 52 32557.5 53 27219.0 54 24978.0 55 22737.0 56 20653.0 57 18569.0 58 16462.0 59 14355.0 60 12659.0 61 10963.0 62 9251.5 63 7540.0 64 6200.5 65 4861.0 66 3964.0 67 3067.0 68 2523.0 69 1979.0 70 1576.0 71 1173.0 72 943.0 73 713.0 74 605.0 75 378.5 76 260.0 77 230.5 78 201.0 79 138.0 80 75.0 81 57.0 82 39.0 83 28.0 84 17.0 85 10.0 86 3.0 87 4.5 88 6.0 89 3.5 90 1.0 91 3.0 92 5.0 93 2.5 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 741288.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 53.97936425871569 #Duplication Level Percentage of deduplicated Percentage of total 1 83.75351702362394 45.209616033667416 2 6.640496368622017 7.1689954468105315 3 3.3003028074933223 5.344447422292323 4 2.0523274874644244 4.431333320960676 5 1.3178120791389485 3.556732912218838 6 0.8611828503622644 2.789166166383823 7 0.5791630358552139 2.1883996734328544 8 0.4175366547723391 1.8030690543457368 9 0.2711520398689258 1.3172953256620688 >10 0.7367933202836796 6.078475295689885 >50 0.03991010886589164 1.5082976261415533 >100 0.02525951156703411 2.778933811251651 >500 0.0015155706940025734 0.49085725530839663 >1k 0.0017681658096696691 3.309332345441693 >5k 2.525951156670956E-4 0.739149216951894 >10k+ 0.0010103804626683823 11.285899093440724 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GAATCTGTCTCTTATACACATCTGACGCTGTACTCCTCGTATGCCGTCTTC 24513 3.3068119273480754 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCTGTACTCCTCGTATGCCG 23232 3.1340045974034383 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 19349 2.610186594144246 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCTGTACTCCTCGTATGC 15678 2.1149674620390453 No Hit GAACTGTCTCTTATACACATCTGACGCTGTACTCCTCGTATGCCGTCTTCT 5421 0.731294719461262 No Hit GAATGATCTGTCTCTTATACACATCTGACGCTGTACTCCTCGTATGCCGTC 4826 0.6510290197602011 No Hit GCTGTCTCTTATACACATCTGACGCTGTACTCCTCGTATGCCGTCTTCTGC 4334 0.5846580546292399 TruSeq Adapter, Index 23 (95% over 22bp) GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCTGTACTCCT 4022 0.542569149912045 No Hit GAATGACTGTCTCTTATACACATCTGACGCTGTACTCCTCGTATGCCGTCT 3852 0.519636092854599 No Hit GAATGATACGGCGACTGTCTCTTATACACATCTGACGCTGTACTCCTCGTA 2955 0.39863049179266363 No Hit GAATGCTGTCTCTTATACACATCTGACGCTGTACTCCTCGTATGCCGTCTT 2843 0.3835216542018757 No Hit GAATGATACGGCGACCTGTCTCTTATACACATCTGACGCTGTACTCCTCGT 1439 0.19412158297449844 No Hit GAATGATACGGCGCTGTCTCTTATACACATCTGACGCTGTACTCCTCGTAT 767 0.10346855742977087 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.06556156311716904 0.0 2 0.0 0.0 0.0 0.723605400330236 0.0 3 0.0 0.0 0.0 0.8388102869599939 0.0 4 0.0 0.0 0.0 1.7180906746095985 0.0 5 0.0 0.0 0.0 5.567741552540983 0.0 6 0.0 0.0 0.0 6.108826798761076 0.0 7 0.0 0.0 0.0 6.792231899072965 0.0 8 0.0 0.0 0.0 7.644397319260531 0.0 9 0.0 0.0 0.0 7.785637970667271 0.0 10 0.0 0.0 0.0 11.445753877035646 0.0 11 0.0 0.0 0.0 11.621798815035453 0.0 12 0.0 0.0 0.0 14.205275142724554 0.0 13 0.0 0.0 0.0 14.399531626034685 0.0 14 0.0 0.0 0.0 14.56491943751956 0.0 15 0.0 0.0 0.0 15.086713935744273 0.0 16 0.0 0.0 0.0 15.388620886888766 0.0 17 0.0 0.0 0.0 15.546454279578247 0.0 18 0.0 0.0 0.0 15.670157887352824 0.0 19 0.0 0.0 0.0 16.429242075954285 0.0 20 0.0 0.0 0.0 16.581004953540326 0.0 21 0.0 0.0 0.0 16.690274225402273 0.0 22 0.0 0.0 0.0 16.922437703025004 0.0 23 1.3490033563203505E-4 0.0 0.0 17.04290370274441 0.0 24 1.3490033563203505E-4 0.0 0.0 17.153791778633945 0.0 25 1.3490033563203505E-4 0.0 0.0 17.24350050182925 0.0 26 1.3490033563203505E-4 0.0 0.0 17.365990006583136 0.0 27 1.3490033563203505E-4 0.0 0.0 17.532861721759964 0.0 28 1.3490033563203505E-4 0.0 0.0 17.630259764086293 0.0 29 1.3490033563203505E-4 0.0 0.0 17.737235730242496 0.0 30 1.3490033563203505E-4 0.0 0.0 17.856487626941217 0.0 31 1.3490033563203505E-4 0.0 0.0 17.970613310885916 0.0 32 1.3490033563203505E-4 0.0 0.0 18.09593572268808 0.0 33 1.3490033563203505E-4 0.0 0.0 18.21613192173622 0.0 34 1.3490033563203505E-4 0.0 0.0 18.37841702550156 0.0 35 1.3490033563203505E-4 0.0 0.0 18.508326048715208 0.0 36 1.3490033563203505E-4 0.0 0.0 18.633918261188633 0.0 37 1.3490033563203505E-4 0.0 0.0 18.776373015616063 0.0 38 1.3490033563203505E-4 0.0 0.0 18.92611238816762 0.0 39 1.3490033563203505E-4 0.0 0.0 19.08043837213067 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CACGACG 30 2.1644537E-6 45.000004 26 CGATAGG 25 3.88946E-5 45.000004 10 ACGACGG 30 2.1644537E-6 45.000004 27 CGTTTTT 23995 0.0 44.521774 1 CGATGAA 605 0.0 42.768597 19 ACGGCTG 1990 0.0 42.738693 8 CGGCTGT 2005 0.0 42.531174 9 TACGGCT 2020 0.0 42.103962 7 GATACCT 2695 0.0 41.743973 5 CCGATGA 615 0.0 41.707317 18 ATACCTG 2710 0.0 41.512913 6 TGATACC 2715 0.0 41.436462 4 CGCTTTT 640 0.0 41.132812 1 CGGGTAT 115 0.0 41.086956 6 GAATCTG 2855 0.0 40.980732 1 TACCTGT 2795 0.0 40.73345 7 CGACCAC 1760 0.0 40.653408 12 GCGGGTA 135 0.0 40.0 5 GCGACCA 1820 0.0 39.931316 11 GAATGAT 8195 0.0 39.838318 1 >>END_MODULE