##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2933267.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 468755 Sequences flagged as poor quality 0 Sequence length 51 %GC 41 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 28.68278738360124 31.0 28.0 31.0 16.0 33.0 2 29.128034900961058 31.0 30.0 33.0 16.0 34.0 3 29.373079753815958 31.0 30.0 33.0 16.0 34.0 4 32.09337500399996 35.0 30.0 37.0 19.0 37.0 5 33.53566361958806 35.0 33.0 37.0 28.0 37.0 6 32.898593081673795 35.0 33.0 37.0 25.0 37.0 7 31.541950485861484 33.0 30.0 35.0 23.0 37.0 8 33.01051295452849 35.0 32.0 35.0 28.0 37.0 9 32.474516538490256 34.0 31.0 37.0 25.0 39.0 10 30.459114036116947 34.0 27.0 37.0 15.0 39.0 11 31.242832609785495 35.0 27.0 39.0 15.0 39.0 12 32.117822743224075 35.0 30.0 39.0 18.0 39.0 13 32.340030506341265 35.0 30.0 39.0 21.0 39.0 14 32.57888875851991 36.0 30.0 39.0 17.0 41.0 15 33.23891798487483 36.0 30.0 39.0 21.0 41.0 16 33.4191592623012 36.0 31.0 39.0 22.0 41.0 17 31.428893558468708 34.0 27.0 38.0 17.0 41.0 18 32.33572548559482 34.0 29.0 39.0 19.0 39.0 19 32.23187805996736 35.0 30.0 37.0 18.0 39.0 20 32.31442224616271 34.0 30.0 37.0 23.0 39.0 21 32.61336732408188 35.0 31.0 37.0 23.0 39.0 22 33.22536932939382 35.0 31.0 38.0 25.0 39.0 23 34.33043487536133 35.0 33.0 39.0 27.0 40.0 24 32.4633891905153 35.0 31.0 37.0 22.0 39.0 25 31.440793164872908 34.0 29.0 37.0 18.0 39.0 26 31.278034367633413 34.0 27.0 37.0 20.0 39.0 27 32.744975520261114 35.0 31.0 38.0 22.0 40.0 28 32.699390939829975 35.0 31.0 38.0 22.0 40.0 29 33.174148542415544 35.0 31.0 38.0 22.0 40.0 30 31.93549935467355 35.0 30.0 38.0 18.0 40.0 31 32.21546436838007 35.0 30.0 38.0 21.0 40.0 32 32.17374108009515 35.0 30.0 38.0 20.0 40.0 33 32.47930795404849 35.0 31.0 38.0 18.0 40.0 34 31.84366886753208 35.0 31.0 38.0 15.0 40.0 35 31.44434939360647 35.0 30.0 38.0 12.0 40.0 36 30.8848780279677 35.0 29.0 38.0 10.0 40.0 37 31.15959723096287 35.0 30.0 38.0 10.0 40.0 38 31.08748706680462 35.0 29.0 38.0 10.0 40.0 39 30.57859649497072 35.0 28.0 38.0 10.0 40.0 40 30.352486906806327 35.0 26.0 38.0 10.0 40.0 41 29.852950901857046 34.0 25.0 38.0 8.0 40.0 42 30.348757879915947 35.0 27.0 38.0 9.0 40.0 43 30.34912480933537 35.0 27.0 38.0 8.0 40.0 44 30.363964117716076 35.0 27.0 38.0 8.0 40.0 45 30.693950997856025 35.0 28.0 38.0 8.0 40.0 46 30.449804268754466 35.0 27.0 38.0 8.0 40.0 47 30.52897995754712 35.0 28.0 38.0 8.0 40.0 48 30.28921291506224 34.0 27.0 38.0 8.0 40.0 49 30.089163848918943 34.0 27.0 38.0 8.0 40.0 50 30.33363484122836 34.0 27.0 38.0 8.0 40.0 51 28.547232562852663 33.0 24.0 36.0 8.0 39.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 8.0 9 31.0 10 35.0 11 26.0 12 45.0 13 70.0 14 128.0 15 225.0 16 459.0 17 822.0 18 1401.0 19 2254.0 20 3174.0 21 4779.0 22 6589.0 23 8956.0 24 12252.0 25 16567.0 26 20742.0 27 23268.0 28 24103.0 29 26166.0 30 29643.0 31 34663.0 32 39851.0 33 44728.0 34 49886.0 35 52666.0 36 40026.0 37 20789.0 38 4332.0 39 70.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 21.973525615726768 2.8247165363569455 41.45363782786317 33.74812002005312 2 33.30545807511386 9.387419867521412 41.29513285191624 16.011989205448476 3 15.227144243794733 9.372273362417467 59.509978560228696 15.890603833559108 4 13.195165918230206 3.4043370204051153 64.20774178408763 19.192755277277044 5 18.586681742061415 3.8245992042751547 58.91393158472976 18.674787468933665 6 16.170067519279794 9.04374353340231 60.68031274333073 14.105876203987158 7 63.16049962133737 1.251186654009024 32.58354577551173 3.0047679491418755 8 65.47087497733357 5.982656185000693 25.436102014911842 3.1103668227538908 9 61.3941184627364 2.434320700579194 25.971562969994988 10.199997866689422 10 32.78450363196126 18.949557871382705 33.34087103070901 14.92506746594703 11 25.730712205736474 19.166728888225194 39.762135870550715 15.340423035487621 12 21.939819308594043 17.039178248765346 42.73959744429393 18.281404998346684 13 18.971530970336318 18.423056820727247 46.92941941952619 15.675992789410245 14 17.03725826924513 18.986250813324656 44.5059786028949 19.470512314535313 15 16.17902742370748 17.15181704728483 48.20407248989344 18.465083039114248 16 17.885249224008277 17.211763074527205 42.6952245842711 22.207763117193416 17 18.49836268413137 17.853462896395772 44.97701357852183 18.67116084095103 18 18.96662435600687 16.39427846102975 44.42000618660067 20.219090996362706 19 18.16769954453819 20.536740941429958 41.17225416262226 20.123305351409584 20 19.661870273383748 20.377595972309628 44.697123230685534 15.263410523621083 21 19.681710061759343 22.001471984298835 42.02813836652409 16.288679587417736 22 18.160872950688525 17.249096009642564 44.465445701912515 20.124585337756397 23 18.341777687704663 21.53065033972971 42.90215571033909 17.22541626222654 24 18.09047370161385 19.38389990506768 43.269298460816415 19.256327932502053 25 17.77709037770264 22.32274855734872 40.133545242184084 19.766615822764557 26 16.9508591908353 19.79072223229619 42.44861388145193 20.80980469541658 27 17.07373788012928 19.73568281938326 42.27176243453403 20.91881686595343 28 14.80432208723107 21.362972128297297 43.85659886294546 19.97610692152617 29 17.810370022719756 19.601284252967968 41.691501957312454 20.89684376699982 30 18.033727640238503 20.54868748066687 44.272167763543855 17.145417115550767 31 19.19552858102847 19.826135187891328 41.742914742242746 19.235421488837453 32 20.179411419611522 20.538447589892375 39.44981920192851 19.83232178856759 33 19.47349894934454 19.3858198845879 38.496656035668956 22.64402513039861 34 18.63894785122292 23.10631353265565 39.34870028053034 18.906038335591088 35 17.245256050602126 23.387270535780953 37.70477114910774 21.66270226450918 36 19.751255986602807 24.421286172947486 35.02021311772675 20.80724472272296 37 19.059210035092956 23.1528197032565 36.563663320924576 21.224306940725963 38 21.626009322567228 22.522853089567043 36.07641518490469 19.774722402961036 39 20.38634254567951 22.849889601177587 34.91909419632857 21.84467365681433 40 22.520293116873418 22.322961888406525 34.602937568665936 20.55380742605412 41 18.953611161480943 23.045087519066463 35.48164819575258 22.519653123700014 42 18.864865441435292 22.521786434278035 35.50895457115124 23.104393553135434 43 20.331516463824386 22.27816236626809 33.66172094164329 23.72860022826423 44 21.45278450363196 22.46845366982752 34.341820353916226 21.73694147262429 45 19.372380027946367 21.70536847606959 34.268861132147926 24.65339036383612 46 21.210013759853226 23.43100340263037 33.203699160542286 22.155283676974115 47 17.7627971968299 22.441573956544463 39.43488602788237 20.360742818743265 48 19.572057898049085 23.80219944320594 34.78810892683811 21.837633731906863 49 18.85825217864343 22.318695267250483 36.34073236552143 22.482320188584655 50 20.04906614329447 21.311559343367005 35.252957301788776 23.38641721154974 51 19.264434512698532 21.57843649667737 34.41819287260936 24.73893611801474 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 86.0 1 372.5 2 659.0 3 15408.5 4 30158.0 5 20182.0 6 10206.0 7 9647.0 8 9088.0 9 8917.5 10 8747.0 11 8229.0 12 7711.0 13 7433.5 14 7156.0 15 6600.5 16 6045.0 17 5536.0 18 5027.0 19 4603.5 20 4180.0 21 3940.0 22 3700.0 23 3589.0 24 3478.0 25 3676.0 26 4220.5 27 4567.0 28 4840.0 29 5113.0 30 5824.0 31 6535.0 32 7557.5 33 8580.0 34 9490.0 35 10400.0 36 11336.0 37 12272.0 38 12971.5 39 13671.0 40 14536.5 41 15402.0 42 16571.5 43 17741.0 44 19571.0 45 21401.0 46 32925.0 47 44449.0 48 39124.5 49 33800.0 50 32831.0 51 31862.0 52 29158.0 53 26454.0 54 25061.0 55 23668.0 56 22499.0 57 21330.0 58 19758.5 59 18187.0 60 16487.0 61 14787.0 62 13049.5 63 11312.0 64 9927.5 65 8543.0 66 7148.0 67 5753.0 68 4880.0 69 4007.0 70 3576.5 71 3146.0 72 2669.0 73 2192.0 74 1862.5 75 1235.0 76 937.0 77 741.0 78 545.0 79 369.5 80 194.0 81 157.0 82 120.0 83 93.0 84 66.0 85 58.0 86 50.0 87 31.5 88 13.0 89 9.0 90 5.0 91 3.0 92 1.0 93 1.5 94 2.0 95 1.0 96 0.0 97 1.0 98 2.0 99 1.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 468755.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 43.67423701010386 #Duplication Level Percentage of deduplicated Percentage of total 1 78.34665515669876 34.21730386262538 2 7.103218315507956 6.204552804920103 3 3.305715260135848 4.331237752772705 4 2.172184747358928 3.7947404594354563 5 1.6729980530678712 3.6533456743564257 6 1.3131087205646181 3.4409412889184026 7 1.0401941258303828 3.180077935162376 8 0.8586785517607533 3.0001704468073496 9 0.7136002046195905 2.8049350020313146 >10 3.3781057846041054 21.888153791333508 >50 0.05952559425285131 1.7308991348183762 >100 0.03051311974305012 2.2919175594314996 >500 0.0020008603110196798 0.6110469367772285 >1k 0.0020008603110196798 1.7800537865072785 >5k 0.0010004301555098399 2.52895221313307 >10k+ 5.002150777549199E-4 4.5416713509695406 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 20789 4.43493936064682 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCATTCGTCCTCGTATGCCG 6563 1.400091732354855 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCATTCGTCCTCGTATGC 5013 1.0694285927616773 No Hit GAATCTGTCTCTTATACACATCTGACGCATTCGTCCTCGTATGCCGTCTTC 3848 0.8208979104222889 No Hit GAACTGTCTCTTATACACATCTGACGCATTCGTCCTCGTATGCCGTCTTCT 1531 0.3266098494949387 No Hit GCTGTCTCTTATACACATCTGACGCATTCGTCCTCGTATGCCGTCTTCTGC 1494 0.31871660035626287 TruSeq Adapter, Index 22 (95% over 23bp) GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCATTCGTCCT 1275 0.2719970986976139 No Hit GAATGATCTGTCTCTTATACACATCTGACGCATTCGTCCTCGTATGCCGTC 877 0.18709133769239794 No Hit GAATGATACGGCGACTGTCTCTTATACACATCTGACGCATTCGTCCTCGTA 828 0.17663811586009748 No Hit GAATGACTGTCTCTTATACACATCTGACGCATTCGTCCTCGTATGCCGTCT 547 0.11669208861772142 No Hit GAATGATACCTGTCTCTTCTACACATCTGACGCATTCGTCCTCGTATGCCG 545 0.11626542650211731 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.08831905793004875 0.0 2 0.0 0.0 0.0 0.5663939584644431 0.0 3 0.0 0.0 0.0 0.710819084596431 0.0 4 0.0 0.0 0.0 1.2659064969973655 0.0 5 0.0 0.0 0.0 2.460133758573242 0.0 6 0.0 0.0 0.0 2.775863724120276 0.0 7 0.0 0.0 0.0 3.116340092372348 0.0 8 0.0 0.0 0.0 3.5905750338663056 0.0 9 0.0 0.0 0.0 3.8004927947435228 0.0 10 0.0 0.0 0.0 5.764205181811394 0.0 11 0.0 0.0 0.0 6.282812983328178 0.0 12 0.0 0.0 0.0 7.893249138675854 0.0 13 0.0 0.0 0.0 8.102313575321864 0.0 14 0.0 0.0 0.0 8.233725506927927 0.0 15 0.0 0.0 0.0 8.613668120873378 0.0 16 0.0 0.0 0.0 8.83766573156553 0.0 17 0.0 0.0 0.0 9.060810018026475 0.0 18 0.0 0.0 0.0 9.284807628718626 0.0 19 0.0 0.0 0.0 9.793602201576517 0.0 20 0.0 0.0 0.0 10.001386651875713 0.0 21 0.0 0.0 0.0 10.253117300082133 0.0 22 0.0 0.0 0.0 10.59935360689486 0.0 23 0.0 0.0 0.0 10.854924214141716 0.0 24 0.0 0.0 0.0 11.064415312903328 0.0 25 0.0 0.0 0.0 11.255559940693965 0.0 26 0.0 0.0 0.0 11.426011455877804 0.0 27 0.0 0.0 0.0 11.617369414726243 0.0 28 0.0 0.0 0.0 11.79400753058634 0.0 29 0.0 0.0 0.0 12.004565284636964 0.0 30 0.0 0.0 0.0 12.238589455045814 0.0 31 0.0 0.0 0.0 12.422907488986784 0.0 32 0.0 0.0 0.0 12.614478778893025 0.0 33 0.0 0.0 0.0 12.810103358897505 0.0 34 0.0 0.0 0.0 13.027914368913398 0.0 35 0.0 0.0 0.0 13.283911638275859 0.0 36 0.0 0.0 0.0 13.478896225106933 0.0 37 0.0 0.0 0.0 13.679214088383057 0.0 38 0.0 0.0 0.0 13.962091071028576 0.0 39 0.0 0.0 0.0 14.440379302620771 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TGCTACG 70 0.0 45.000004 4 CGCGCAA 25 3.887259E-5 45.0 16 TCCGTCA 20 7.029007E-4 45.0 28 TGTCGTG 20 7.029007E-4 45.0 1 CGTTTTT 9520 0.0 44.267334 1 TACGGCT 745 0.0 41.677853 7 ACCGGTG 65 0.0 41.53846 17 CGACCAC 510 0.0 41.47059 12 GAATGAT 2615 0.0 41.38623 1 TTACGGG 55 6.002665E-11 40.909092 3 ATGATAC 2480 0.0 40.64516 3 AATGATA 2490 0.0 40.391563 2 ATACGGC 1625 0.0 40.153847 6 TGATACC 910 0.0 40.054943 4 GTTTTTT 10665 0.0 40.000004 2 ACGGCTG 780 0.0 39.807693 8 GATACCT 915 0.0 39.590164 5 GCGACCA 535 0.0 39.53271 11 TCGTTGA 80 0.0 39.375 24 ATCCGGC 40 3.4523873E-7 39.375 6 >>END_MODULE