SRR2933265.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2933265.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	388911
Sequences flagged as poor quality	0
Sequence length	51
%GC	39

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	22393	5.757872623813674	No Hit
GAATGATACCTGTCTCTTATACACATCTGACGCGCAGCTATTCGTATGCCG	5457	1.4031487923972323	No Hit
GAATGATACGGCTGTCTCTTATACACATCTGACGCGCAGCTATTCGTATGC	4509	1.159391223184739	No Hit
GAATCTGTCTCTTATACACATCTGACGCGCAGCTATTCGTATGCCGTCTTC	3121	0.8024972294432402	No Hit
GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCGCAGCTATT	1128	0.2900406519743592	No Hit
GCTGTCTCTTATACACATCTGACGCGCAGCTATTCGTATGCCGTCTTCTGC	1012	0.26021377641671234	No Hit
GAACTGTCTCTTATACACATCTGACGCGCAGCTATTCGTATGCCGTCTTCT	937	0.2409291585992682	No Hit
GAATGATCTGTCTCTTATACACATCTGACGCGCAGCTATTCGTATGCCGTC	682	0.17536145801995828	No Hit
GAATGATACGGCGACTGTCTCTTATACACATCTGACGCGCAGCTATTCGTA	614	0.15787673786547565	No Hit
GAATGATACCTGTCTCTTCTACACATCTGACGCGCAGCTATTCGTATGCCG	448	0.11519345042953272	No Hit
GAATGACTGTCTCTTATACACATCTGACGCGCAGCTATTCGTATGCCGTCT	448	0.11519345042953272	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CGGGTAT	40	6.7957444E-9	45.0	6
CGGTTAT	20	7.027524E-4	45.0	31
TGTCTAG	20	7.027524E-4	45.0	6
CTAGGCG	20	7.027524E-4	45.0	4
TGGTACC	20	7.027524E-4	45.0	29
CGTTTTT	9840	0.0	44.245426	1
TGATACC	710	0.0	43.415493	4
CACCGGT	90	0.0	42.5	16
CCGATGA	85	0.0	42.35294	18
GATACCT	730	0.0	42.22603	5
GAATGAT	2335	0.0	41.91649	1
TAGCGGG	65	0.0	41.538464	3
GACCACC	495	0.0	41.363636	13
ATGATAC	2270	0.0	41.23348	3
AATGATA	2275	0.0	40.945053	2
GCGATTT	160	0.0	40.78125	9
TACGGCT	705	0.0	40.531914	7
ATACGGC	1555	0.0	40.51447	6
TCGTTTG	140	0.0	40.178574	1
ACGGCTG	715	0.0	39.965034	8