##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2933258.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 39085 Sequences flagged as poor quality 0 Sequence length 51 %GC 35 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 27.554483817321223 30.0 25.0 31.0 16.0 33.0 2 24.197518229499806 28.0 16.0 31.0 10.0 33.0 3 24.439247793271075 28.0 16.0 31.0 10.0 34.0 4 30.433977229116028 32.0 28.0 35.0 19.0 37.0 5 33.14895740053729 35.0 32.0 35.0 28.0 37.0 6 32.799692976845336 35.0 32.0 35.0 28.0 37.0 7 32.70016630420878 35.0 32.0 35.0 27.0 37.0 8 30.832390942816936 35.0 29.0 35.0 17.0 37.0 9 31.68537802225918 35.0 30.0 38.0 16.0 39.0 10 32.903031853652294 35.0 31.0 39.0 22.0 39.0 11 33.91822949980811 37.0 32.0 39.0 27.0 39.0 12 34.22448509658437 37.0 32.0 39.0 26.0 39.0 13 34.44024561852373 37.0 32.0 39.0 27.0 39.0 14 35.16001023410516 38.0 33.0 40.0 25.0 41.0 15 35.72521427657669 38.0 33.0 40.0 27.0 41.0 16 35.325342202891136 38.0 33.0 40.0 27.0 41.0 17 35.11224254829219 37.0 33.0 40.0 27.0 41.0 18 34.49036714852245 37.0 33.0 39.0 25.0 40.0 19 33.70981194831777 36.0 32.0 37.0 25.0 40.0 20 33.295688883203276 35.0 32.0 37.0 25.0 39.0 21 33.45104259946271 35.0 32.0 37.0 26.0 39.0 22 33.933990021747476 35.0 33.0 38.0 27.0 39.0 23 34.375156709735194 35.0 33.0 38.0 28.0 40.0 24 33.29085326851733 35.0 33.0 37.0 25.0 39.0 25 32.41176922092875 35.0 31.0 37.0 21.0 39.0 26 32.230062683894076 34.0 30.0 37.0 22.0 39.0 27 33.22348727133171 35.0 32.0 37.0 25.0 39.0 28 33.262965331968786 35.0 33.0 37.0 24.0 40.0 29 32.99800434949469 35.0 32.0 38.0 23.0 40.0 30 32.20506588205194 35.0 31.0 37.0 21.0 40.0 31 32.02008443136753 35.0 31.0 37.0 18.0 40.0 32 31.157528463604965 35.0 30.0 37.0 15.0 40.0 33 30.532045541767943 35.0 27.0 38.0 10.0 40.0 34 29.967557886657286 35.0 24.0 38.0 8.0 40.0 35 29.287936548548036 35.0 22.0 38.0 7.0 40.0 36 28.650633235256493 35.0 18.0 38.0 7.0 40.0 37 28.533606242804144 35.0 18.0 38.0 7.0 40.0 38 28.363489829858 34.0 18.0 38.0 7.0 40.0 39 27.870538569783804 34.0 17.0 38.0 7.0 40.0 40 27.640194447997953 33.0 16.0 38.0 7.0 40.0 41 26.89886145580146 33.0 15.0 37.0 7.0 40.0 42 26.781757707560445 33.0 15.0 37.0 7.0 40.0 43 26.960368427785596 33.0 15.0 37.0 7.0 40.0 44 27.24364845848791 33.0 15.0 38.0 7.0 40.0 45 27.43720097223999 34.0 15.0 38.0 7.0 40.0 46 27.291237047460662 33.0 15.0 38.0 7.0 40.0 47 27.229909172316745 33.0 15.0 38.0 7.0 40.0 48 27.27870026864526 33.0 15.0 37.0 7.0 40.0 49 27.329487015479085 34.0 15.0 38.0 7.0 40.0 50 27.376435972879623 33.0 15.0 38.0 7.0 40.0 51 26.822873225022388 33.0 15.0 37.0 7.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 2.0 10 3.0 11 1.0 12 6.0 13 18.0 14 11.0 15 35.0 16 44.0 17 89.0 18 146.0 19 218.0 20 383.0 21 520.0 22 821.0 23 1153.0 24 1543.0 25 2067.0 26 2260.0 27 2382.0 28 2161.0 29 2103.0 30 2197.0 31 2538.0 32 2786.0 33 3302.0 34 3590.0 35 3683.0 36 2659.0 37 1630.0 38 641.0 39 93.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 22.011001663042087 2.144045030062684 29.325828322886018 46.51912498400921 2 39.549699373161054 13.56786490981195 31.973903031853652 14.90853268517334 3 12.124856082896251 14.463349110912116 56.13918383011386 17.27261097607778 4 8.67852117180504 2.5943456569016248 73.30689522834847 15.420237942944864 5 20.058846104643724 2.6020212357681975 63.37981322758092 13.959319432007163 6 12.073685557119099 13.342714596392478 65.01982857873865 9.563771267749777 7 44.019444799795316 1.051554304720481 52.73378533964437 2.1952155558398365 8 40.660099782525265 10.47204810029423 46.009978252526544 2.857873864653959 9 38.42138927977485 2.013560189330945 44.68210310860944 14.882947422284765 10 29.43072790072918 11.963668926698222 47.25853908148906 11.347064091083537 11 24.211334271459638 11.65408724574645 53.358065754125626 10.776512728668287 12 19.07381348343354 10.692081361135985 53.90047332736344 16.333631828067034 13 16.899066137904565 10.656261993091979 61.82678777024434 10.617884098759115 14 14.468466163489829 14.818984265063323 56.238966355379304 14.473583216067546 15 11.469873352948703 10.843034412178586 64.00153511577331 13.685557119099398 16 14.609185109376998 12.247665344761417 53.73161059229884 19.411538953562747 17 14.944352053217347 13.248049123704748 58.917743379813224 12.88985544326468 18 14.949469105795062 12.173468082384547 56.77881540232826 16.098247409492135 19 14.893181527440195 15.653063835230906 53.96443648458488 15.48931815274402 20 15.141358577459382 15.184853524369963 59.263144428809014 10.410643469361649 21 14.923883842906486 19.329666112319305 54.808750159907895 10.937699884866317 22 13.122681335550723 11.129589356530637 59.227325060765004 16.52040424715364 23 13.744403223743124 18.252526544710246 56.22617372393501 11.776896507611616 24 13.979787642318026 14.517078162978125 54.10515543047205 17.3979787642318 25 14.302161954714085 20.65754125623641 51.49290008954842 13.547396699501087 26 12.654471024689778 12.72866828706665 56.96047076883715 17.656389919406422 27 14.343098375335806 14.3738006908021 53.96443648458488 17.318664449277215 28 11.474990405526416 15.389535627478573 58.058078546757066 15.077395420237943 29 16.22873225022387 13.624152488166816 54.13074069336062 16.01637456824869 30 14.788281949597032 17.011641294614304 55.908916464116665 12.291160291671996 31 17.03466803121402 15.03645899961622 50.97096072662146 16.957912242548293 32 19.59319432007164 17.832928233337597 47.957016758347194 14.616860688243571 33 17.965971600358195 15.686324676986056 45.27568120762441 21.072022515031342 34 18.6900345401049 18.802609696814635 47.44019444799795 15.067161315082512 35 17.05769476781374 21.138544198541638 44.505564794678264 17.298196238966355 36 19.084047588588973 22.978124600230267 42.07752334655239 15.860304464628374 37 18.203914545221952 21.38672124856083 41.701419982090314 18.7079442241269 38 23.97339132659588 23.62031469873353 37.541256236407825 14.86503773826276 39 19.621338109249074 19.75182294998081 37.69220928745043 22.93462965331969 40 27.01292055775873 19.810669054624537 37.99411538953563 15.182294998081106 41 19.682742740181656 21.220417039785083 39.53434821542791 19.562492004605346 42 20.498912626327233 21.739797876423182 40.39401304848408 17.367276448765512 43 19.79531789689139 19.148010745810414 41.3585774593834 19.698093897914802 44 22.832288601765384 20.424715363950366 37.909684022003326 18.833312012280924 45 18.434181911219138 20.703594729435846 38.40092106946399 22.461302289881026 46 20.713828834591276 21.455801458359986 36.93488550594857 20.895484201100167 47 17.50031981578611 19.298963796853013 44.873992580273764 18.326723807087117 48 19.275937060253295 23.12651912498401 37.3800690802098 20.217474734552898 49 18.36510170141998 20.654982729947548 39.85160547524626 21.12831009338621 50 18.444416016374568 19.10963285147755 40.007675578866575 22.438275553281308 51 18.797492644236918 20.457976205705513 38.17321222975566 22.571318920301906 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 6.0 1 345.0 2 684.0 3 1903.0 4 3122.0 5 2436.5 6 1751.0 7 1551.0 8 1351.0 9 1286.5 10 1222.0 11 1198.5 12 1175.0 13 1105.5 14 1036.0 15 966.0 16 896.0 17 824.0 18 752.0 19 674.0 20 596.0 21 556.5 22 517.0 23 522.5 24 528.0 25 507.5 26 511.5 27 536.0 28 546.5 29 557.0 30 591.0 31 625.0 32 628.0 33 631.0 34 623.0 35 615.0 36 681.5 37 748.0 38 730.5 39 713.0 40 748.5 41 784.0 42 820.5 43 857.0 44 965.5 45 1074.0 46 2702.5 47 4331.0 48 3317.0 49 2303.0 50 1950.0 51 1597.0 52 1493.0 53 1389.0 54 1384.5 55 1380.0 56 1398.0 57 1416.0 58 1365.0 59 1314.0 60 1171.0 61 1028.0 62 913.5 63 799.0 64 729.0 65 659.0 66 576.0 67 493.0 68 431.0 69 369.0 70 314.5 71 260.0 72 218.5 73 177.0 74 155.0 75 111.0 76 89.0 77 68.0 78 47.0 79 34.5 80 22.0 81 15.5 82 9.0 83 6.0 84 3.0 85 3.0 86 3.0 87 1.5 88 0.0 89 0.5 90 1.0 91 0.5 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 39085.0 >>END_MODULE >>Sequence Duplication Levels pass #Total Deduplicated Percentage 78.14250991428938 #Duplication Level Percentage of deduplicated Percentage of total 1 95.4357933337699 74.57592426762186 2 2.8943749590727523 4.523474478700269 3 0.6351908846833868 1.4890623001151337 4 0.3274179817955602 1.0234105155430473 5 0.1571606312618689 0.6140463093258284 6 0.08512867526684566 0.3991301010617884 7 0.07858031563093446 0.42983241652807985 8 0.04256433763342283 0.26608673404119226 9 0.03929015781546723 0.27632083919662276 >10 0.25211184598258135 4.068056799283613 >50 0.02619343854364482 1.3381092490725344 >100 0.01637089908977801 2.901368811564539 >500 0.006548359635911205 4.592554688499424 >1k 0.0032741798179556024 3.5026224894460793 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1369 3.5026224894460793 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCTTACGCGTTCGTATGCCG 1000 2.558526288857618 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCTTACGCGTTCGTATGC 795 2.0340283996418065 No Hit GAATCTGTCTCTTATACACATCTGACGCTTACGCGTTCGTATGCCGTCTTC 375 0.9594473583216069 No Hit CTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 303 0.7752334655238583 No Hit GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCTTACGCGTT 217 0.5552002046821031 No Hit GAATGATACGGCGACTGTCTCTTATACACATCTGACGCTTACGCGTTCGTA 128 0.3274913649737751 No Hit CGCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 111 0.2839964180631956 No Hit GAACTGTCTCTTATACACATCTGACGCTTACGCGTTCGTATGCCGTCTTCT 92 0.23538441857490086 No Hit GAATGATCTGTCTCTTATACACATCTGACGCTTACGCGTTCGTATGCCGTC 84 0.21491620826403993 No Hit GAATGATACGGCGACCTGTCTCTTATACACATCTGACGCTTACGCGTTCGT 72 0.1842138927977485 No Hit GAATGATACGGCCTGTCTCTTATACACATCTGACGCTTACGCGTTCGTATG 58 0.14839452475374185 No Hit GATTGATACCTGTCTCTTATACACATCTGACGCTTACGCGTTCGTATGCCG 58 0.14839452475374185 No Hit CCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 53 0.13560189330945374 No Hit CGGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 53 0.13560189330945374 No Hit GATTGATACGGCTGTCTCTTATACACATCTGACGCTTACGCGTTCGTATGC 53 0.13560189330945374 No Hit GCTGTCTCTTATACACATCTGACGCTTACGCGTTCGTATGCCGTCTTCTGC 50 0.1279263144428809 No Hit GAATGCTGTCTCTTATACACATCTGACGCTTACGCGTTCGTATGCCGTCTT 49 0.12536778815402327 No Hit GTATGATACCTGTCTCTTATACACATCTGACGCTTACGCGTTCGTATGCCG 48 0.12280926186516566 No Hit CTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 45 0.1151336829985928 No Hit GGATGATACCTGTCTCTTATACACATCTGACGCTTACGCGTTCGTATGCCG 44 0.11257515670973518 No Hit GAATGACTGTCTCTTATACACATCTGACGCTTACGCGTTCGTATGCCGTCT 44 0.11257515670973518 No Hit GATTCTGTCTCTTATACACATCTGACGCTTACGCGTTCGTATGCCGTCTTC 44 0.11257515670973518 No Hit GGATCTGTCTCTTATACACATCTGACGCTTACGCGTTCGTATGCCGTCTTC 42 0.10745810413201996 No Hit GTATGATACGGCTGTCTCTTATACACATCTGACGCTTACGCGTTCGTATGC 40 0.10234105155430473 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.01279263144428809 0.0 2 0.0 0.0 0.0 0.17653831393117564 0.0 3 0.0 0.0 0.0 0.22259178713061276 0.0 4 0.0 0.0 0.0 0.608929256748113 0.0 5 0.0 0.0 0.0 2.2668542919278494 0.0 6 0.0 0.0 0.0 2.5022387105027506 0.0 7 0.0 0.0 0.0 2.765766918255085 0.0 8 0.0 0.0 0.0 3.1904822822054495 0.0 9 0.0 0.0 0.0 3.3670205961366255 0.0 10 0.0 0.0 0.0 6.959191505692721 0.0 11 0.0 0.0 0.0 7.107586030446463 0.0 12 0.0 0.0 0.0 9.947550211078418 0.0 13 0.0 0.0 0.0 10.21363694511961 0.0 14 0.0 0.0 0.0 10.400409364206217 0.0 15 0.0 0.0 0.0 10.886529359089165 0.0 16 0.0 0.0 0.0 11.175642829730075 0.0 17 0.0 0.0 0.0 11.308686196750672 0.0 18 0.0 0.0 0.0 11.377766406549828 0.0 19 0.0 0.0 0.0 12.188819240117692 0.0 20 0.0 0.0 0.0 12.270692081361137 0.0 21 0.0 0.0 0.0 12.332096712293719 0.0 22 0.0 0.0 0.0 12.419086606114877 0.0 23 0.0 0.0 0.0 12.50351797364718 0.0 24 0.0 0.0 0.0 12.587949341179481 0.0 25 0.0 0.0 0.0 12.646795445823205 0.0 26 0.0 0.0 0.0 12.751695023666368 0.0 27 0.0 0.0 0.0 12.86938723295382 0.0 28 0.0 0.0 0.0 12.961494179352693 0.0 29 0.0 0.0 0.0 13.048484073173851 0.0 30 0.0 0.0 0.0 13.127798388128438 0.0 31 0.0 0.0 0.0 13.209671229371882 0.0 32 0.0 0.0 0.0 13.301778175770757 0.0 33 0.0 0.0 0.0 13.365741332992197 0.0 34 0.0 0.0 0.0 13.509018805168223 0.0 35 0.0 0.0 0.0 13.624152488166816 0.0 36 0.0 0.0 0.0 13.752078802609697 0.0 37 0.0 0.0 0.0 13.864653959319432 0.0 38 0.0 0.0 0.0 14.010489957784316 0.0 39 0.0 0.0 0.0 14.35077395420238 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ATCCTAG 20 6.949808E-4 45.000004 14 AATCCTA 20 6.949808E-4 45.000004 13 AACTGTC 40 6.528353E-9 45.000004 2 GATACCT 160 0.0 45.000004 5 TCCTAGC 20 6.949808E-4 45.000004 15 ATGATGC 20 6.949808E-4 45.000004 3 CTGGGAT 30 2.1119304E-6 45.000004 5 CGCTTTT 105 0.0 45.000004 1 ATGAATG 40 6.528353E-9 45.000004 21 CTTGGGA 35 1.1721204E-7 45.000004 4 TTGGGCT 20 6.949808E-4 45.000004 5 TTGGGCA 20 6.949808E-4 45.000004 5 GAACTGT 40 6.528353E-9 45.000004 1 CTAATCC 20 6.949808E-4 45.000004 11 TAATCCT 20 6.949808E-4 45.000004 12 GCATGGG 20 6.949808E-4 45.000004 3 TTGATAC 20 6.949808E-4 45.000004 3 TTCGGGC 20 6.949808E-4 45.000004 4 GACTAAT 20 6.949808E-4 45.000004 9 CGGGGCT 25 3.8217833E-5 45.0 6 >>END_MODULE