SRR2933257.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2933257.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	93477
Sequences flagged as poor quality	0
Sequence length	51
%GC	36

Per base quality graph

Per Sequence quality graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	8060	8.622441884099832	No Hit
GAATGATACCTGTCTCTTATACACATCTGACGCTTACGCGTTCGTATGCCG	1793	1.918118895557196	No Hit
GAATGATACGGCTGTCTCTTATACACATCTGACGCTTACGCGTTCGTATGC	1144	1.2238304609690083	No Hit
GAATCTGTCTCTTATACACATCTGACGCTTACGCGTTCGTATGCCGTCTTC	723	0.7734522930774415	No Hit
GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCTTACGCGTT	312	0.3337719439006387	No Hit
GAACTGTCTCTTATACACATCTGACGCTTACGCGTTCGTATGCCGTCTTCT	212	0.22679375675299807	No Hit
GAATGATACCTGTCTCTTCTACACATCTGACGCTTACGCGTTCGTATGCCG	190	0.20325855558051714	No Hit
GAATGATCTGTCTCTTATACACATCTGACGCTTACGCGTTCGTATGCCGTC	179	0.19149095499427668	No Hit
CGCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	145	0.15511837136407886	No Hit
GAATGCTGTCTCTTATACACATCTGACGCTTACGCGTTCGTATGCCGTCTT	131	0.14014142516340916	No Hit
GAATGATACGGCTGCCTCCTATACACATCTGACGCTTACGCGTTCGTATGC	128	0.13693207954897998	No Hit
GCTGTCTCTTATACACATCTGACGCTTACGCGTTCGTATGCCGTCTTCTGC	128	0.13693207954897998	No Hit
GAATGATACGGCGACTGTCTCTTATACACATCTGACGCTTACGCGTTCGTA	120	0.1283738245771687	No Hit
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAAA	108	0.11553644211945184	No Hit
GAATGATACGGCGACCTGTCTCTTATACACATCTGACGCTTACGCGTTCGT	102	0.10911775089059342	No Hit
GGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAAGCGCAAGG	94	0.10055949591878217	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CTAGATA	25	3.8632672E-5	45.000004	19
CGTGGGC	30	2.1440883E-6	45.000004	4
GATACAT	30	2.1440883E-6	45.000004	22
TCACAAT	30	2.1440883E-6	45.000004	41
TTATGGG	25	3.8632672E-5	45.000004	3
TGTGGGC	30	2.1440883E-6	45.000004	4
ACCCTTA	25	3.8632672E-5	45.000004	39
TTATCAC	30	2.1440883E-6	45.000004	38
TATTGGG	50	2.1827873E-11	45.000004	3
AATGATC	30	2.1440883E-6	45.000004	2
AACATGA	30	2.1440883E-6	45.000004	30
ACATGAT	30	2.1440883E-6	45.000004	31
AATTATC	30	2.1440883E-6	45.000004	45
TAGATAC	25	3.8632672E-5	45.000004	20
TGGGCTC	50	2.1827873E-11	45.000004	6
TGGGATC	35	1.1959855E-7	45.000004	6
ATACATC	30	2.1440883E-6	45.000004	23
TCAACAT	30	2.1440883E-6	45.000004	28
ACAACTA	20	7.0000323E-4	45.0	15
CCGGGAT	20	7.0000323E-4	45.0	5