##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2933257.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 93477 Sequences flagged as poor quality 0 Sequence length 51 %GC 36 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 29.24781497052751 31.0 28.0 33.0 25.0 34.0 2 29.494260620259528 31.0 30.0 33.0 16.0 34.0 3 29.392032264621243 31.0 30.0 34.0 16.0 34.0 4 32.57062165024551 35.0 32.0 37.0 19.0 37.0 5 34.107930293013254 35.0 33.0 37.0 30.0 37.0 6 33.35605550028349 35.0 35.0 37.0 26.0 37.0 7 32.67703285300127 35.0 32.0 37.0 26.0 37.0 8 33.55967778170031 35.0 35.0 37.0 28.0 37.0 9 34.028958995260865 35.0 32.0 39.0 27.0 39.0 10 31.956310108368903 37.0 27.0 39.0 15.0 39.0 11 32.65869679172417 37.0 30.0 39.0 17.0 39.0 12 33.45947131379911 37.0 31.0 39.0 23.0 39.0 13 33.55238186933684 37.0 32.0 39.0 23.0 39.0 14 34.463033687431135 37.0 32.0 40.0 22.0 41.0 15 34.70648394792302 38.0 32.0 40.0 25.0 41.0 16 35.02520406089199 38.0 32.0 40.0 25.0 41.0 17 33.663457321052235 36.0 31.0 40.0 21.0 41.0 18 33.83754292499759 37.0 32.0 39.0 24.0 39.0 19 33.413149758764185 37.0 32.0 37.0 24.0 39.0 20 32.947783946853235 35.0 32.0 36.0 25.0 39.0 21 33.1254961113429 35.0 32.0 37.0 25.0 39.0 22 33.07819035698621 35.0 30.0 37.0 25.0 39.0 23 34.24238047862041 35.0 33.0 38.0 28.0 40.0 24 32.58613348738192 35.0 31.0 37.0 23.0 39.0 25 32.350310771633666 35.0 31.0 37.0 21.0 39.0 26 30.832718208757235 33.0 25.0 37.0 20.0 39.0 27 32.572279812146306 34.0 31.0 37.0 23.0 40.0 28 32.95663104293035 35.0 32.0 37.0 23.0 40.0 29 32.80859462755544 35.0 31.0 38.0 22.0 40.0 30 31.809247194497043 35.0 30.0 37.0 20.0 40.0 31 32.123495619243236 35.0 30.0 37.0 21.0 40.0 32 31.665971308450207 35.0 30.0 37.0 18.0 40.0 33 31.49722391604352 35.0 30.0 38.0 15.0 40.0 34 30.782106828417685 35.0 29.0 38.0 10.0 40.0 35 30.21076842431828 35.0 27.0 38.0 8.0 40.0 36 29.463921606384456 35.0 23.0 38.0 7.0 40.0 37 29.42436107277726 35.0 23.0 38.0 7.0 40.0 38 29.305091091926357 35.0 23.0 38.0 7.0 40.0 39 28.704226708174204 34.0 22.0 37.0 7.0 40.0 40 28.324208093969638 33.0 21.0 37.0 7.0 40.0 41 27.616023192870973 33.0 18.0 37.0 7.0 40.0 42 27.94974164767804 33.0 20.0 37.0 7.0 40.0 43 28.032992072916333 33.0 20.0 37.0 7.0 40.0 44 28.07140793992105 33.0 20.0 37.0 7.0 40.0 45 28.52936016346267 34.0 20.0 37.0 7.0 40.0 46 28.32510671074168 34.0 20.0 37.0 7.0 40.0 47 28.42344106036779 34.0 20.0 37.0 7.0 40.0 48 28.406228270055735 34.0 21.0 37.0 7.0 40.0 49 28.49781229607283 34.0 20.0 37.0 7.0 40.0 50 28.635407640382127 34.0 22.0 37.0 7.0 40.0 51 27.309979995079004 32.0 20.0 35.0 7.0 39.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 3.0 11 6.0 12 3.0 13 15.0 14 24.0 15 26.0 16 51.0 17 131.0 18 184.0 19 290.0 20 500.0 21 764.0 22 1163.0 23 1786.0 24 2769.0 25 4087.0 26 5443.0 27 5788.0 28 5846.0 29 5594.0 30 5956.0 31 6546.0 32 7351.0 33 8193.0 34 8869.0 35 9934.0 36 6651.0 37 4246.0 38 1236.0 39 22.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 19.4967746076575 2.3171475336178955 34.1420884281695 44.04398943055511 2 45.08595697337313 10.45069910245301 31.782149619692547 12.681194304481316 3 11.73336756635322 10.49562994105502 63.747231939407556 14.023770553184207 4 10.704237405992918 2.485103287439691 71.41328883040748 15.39737047615991 5 17.592562876429497 2.910876472287301 63.93658333065888 15.559977320624323 6 13.683579918054708 9.66761877253228 65.63646672443488 11.012334584978124 7 49.24740845341635 1.1863880954673343 47.150635985322594 2.4155674657937247 8 50.80394107641452 7.254190870481509 39.226761663296855 2.715106389807118 9 47.167752495266214 2.3246360067182303 39.47602083935086 11.0315906586647 10 30.186035067449744 13.22464349519133 44.61846229553794 11.970859141820982 11 23.62185350407052 13.387250339655743 50.86063951560277 12.130256640670966 12 19.21007306610182 11.734437348224697 52.92424874568076 16.131240839992724 13 17.119719289236922 12.113140130727345 58.78772318324293 11.979417396792794 14 14.740524407073396 14.09972506605903 55.56874953197043 15.591000994897142 15 12.490773131358516 12.190164425473645 60.256533692780046 15.062528750387797 16 15.062528750387797 12.358120179295442 52.86862008836398 19.71073098195278 17 15.98147137798603 13.351947537897022 55.652192517945586 15.014388566171357 18 15.896958610139391 12.515378114402473 54.570643045882946 17.017020229575188 19 15.794259550477657 15.611326850455193 51.505717984103036 17.08869561496411 20 16.22003273532527 16.243567936497747 55.062742706762094 12.473656621414895 21 16.45752431079303 18.023684970634488 52.47066123217476 13.048129486397725 22 14.876386704750901 12.841661585202777 55.184697840110395 17.09725386993592 23 14.718058987772393 17.71665757352076 53.30830043754079 14.256983001166063 24 14.913829070252577 15.246531232281738 52.23637900232143 17.60326069514426 25 15.746119366261219 18.908394578345476 49.860393465772326 15.485092589620978 26 14.325449040940551 14.489125667276442 53.37890604105823 17.80651925072478 27 14.808990446847888 14.93308514393915 52.3369384982402 17.920985910972753 28 13.15938680103127 15.756817184975983 54.65301624998663 16.43077976400612 29 16.720690651176227 14.660290766712667 51.84911796484697 16.76990061726414 30 15.693700054558876 16.92715855237117 53.238764615894816 14.140376777175135 31 16.911111824299024 16.027471998459514 49.963092525434064 17.098323651807394 32 19.125560298255188 17.410699958278506 47.825668346224205 15.638071397242104 33 18.03759213496368 16.116263893792055 45.83801362902104 20.00813034222322 34 18.253688073001914 18.68374038533543 46.88105095371054 16.181520587952118 35 16.877948586283257 21.02335333825433 44.641997496710424 17.45670057875199 36 18.97472105437701 22.223648598050858 42.55378328358847 16.247847063983652 37 18.184152251355947 21.568942092707296 41.669073675877485 18.577831980059266 38 22.809889063619927 21.92303989216599 39.13903954983579 16.1280314943783 39 19.813430041614517 19.72891727376788 38.59024144976839 21.867411234849214 40 24.937685205986497 19.704312290723923 39.06415481883244 16.293847684457138 41 18.901975887116617 20.927072969821452 40.877435090984946 19.29351605207698 42 19.55347304684575 21.121773270430158 41.73005124255164 17.594702440172448 43 19.2111428479733 19.463611369641733 42.12907988061234 19.19616590177263 44 21.25014709500733 20.390042470340298 39.4877884399371 18.872021994715276 45 18.405597098751564 20.52055585866042 39.51560276859548 21.558244273992532 46 19.674358398322582 21.364613755255306 38.68652181820127 20.274506028220845 47 17.391443884591933 19.890454336360815 44.29538817035206 18.422713608695187 48 18.802486173069312 21.985087240711618 39.136899986092835 20.075526600126235 49 18.18094290574152 20.345111631738288 40.8571092354269 20.616836227093298 50 18.235501781186816 19.280678669619263 40.80468992372455 21.67912962546937 51 18.482621393497865 20.020967724680936 39.88146816864042 21.61494271318078 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 24.0 1 135.0 2 246.0 3 5884.5 4 11523.0 5 7464.0 6 3405.0 7 3122.5 8 2840.0 9 2721.5 10 2603.0 11 2569.0 12 2535.0 13 2308.0 14 2081.0 15 1907.0 16 1733.0 17 1570.0 18 1407.0 19 1292.5 20 1178.0 21 1117.0 22 1056.0 23 980.0 24 904.0 25 902.0 26 945.5 27 991.0 28 1034.0 29 1077.0 30 1169.0 31 1261.0 32 1329.0 33 1397.0 34 1516.0 35 1635.0 36 1615.5 37 1596.0 38 1671.0 39 1746.0 40 1840.0 41 1934.0 42 2006.5 43 2079.0 44 2345.5 45 2612.0 46 5240.0 47 7868.0 48 6645.0 49 5422.0 50 5111.0 51 4800.0 52 4369.5 53 3939.0 54 3866.0 55 3793.0 56 3701.0 57 3609.0 58 3545.5 59 3482.0 60 3112.5 61 2743.0 62 2491.0 63 2239.0 64 2056.5 65 1874.0 66 1683.0 67 1492.0 68 1287.5 69 1083.0 70 970.5 71 858.0 72 707.5 73 557.0 74 487.5 75 343.0 76 268.0 77 200.5 78 133.0 79 105.5 80 78.0 81 57.5 82 37.0 83 25.5 84 14.0 85 9.5 86 5.0 87 3.0 88 1.0 89 1.0 90 1.0 91 0.5 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 93477.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 67.3812809568129 #Duplication Level Percentage of deduplicated Percentage of total 1 86.99711046899311 58.619767429421145 2 8.971835010954814 12.09067471142634 3 2.23700504874099 4.521967970730769 4 0.7588988029085829 2.045422938262888 5 0.26355063029879655 0.8879189533254169 6 0.15876543993903405 0.6418691228858435 7 0.10637284475915282 0.5017276977224344 8 0.0349283967865875 0.18828160937984745 9 0.046041977582319885 0.27921306845534194 >10 0.37944940145429146 4.781924965499535 >50 0.02222716159146477 1.0259208147458734 >100 0.01746419839329375 1.8774671844410926 >500 0.0015876543993903407 0.7734522930774415 >1k 0.0031753087987806813 3.1419493565262044 >5k 0.0015876543993903407 8.622441884099832 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 8060 8.622441884099832 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCTTACGCGTTCGTATGCCG 1793 1.918118895557196 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCTTACGCGTTCGTATGC 1144 1.2238304609690083 No Hit GAATCTGTCTCTTATACACATCTGACGCTTACGCGTTCGTATGCCGTCTTC 723 0.7734522930774415 No Hit GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCTTACGCGTT 312 0.3337719439006387 No Hit GAACTGTCTCTTATACACATCTGACGCTTACGCGTTCGTATGCCGTCTTCT 212 0.22679375675299807 No Hit GAATGATACCTGTCTCTTCTACACATCTGACGCTTACGCGTTCGTATGCCG 190 0.20325855558051714 No Hit GAATGATCTGTCTCTTATACACATCTGACGCTTACGCGTTCGTATGCCGTC 179 0.19149095499427668 No Hit CGCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 145 0.15511837136407886 No Hit GAATGCTGTCTCTTATACACATCTGACGCTTACGCGTTCGTATGCCGTCTT 131 0.14014142516340916 No Hit GAATGATACGGCTGCCTCCTATACACATCTGACGCTTACGCGTTCGTATGC 128 0.13693207954897998 No Hit GCTGTCTCTTATACACATCTGACGCTTACGCGTTCGTATGCCGTCTTCTGC 128 0.13693207954897998 No Hit GAATGATACGGCGACTGTCTCTTATACACATCTGACGCTTACGCGTTCGTA 120 0.1283738245771687 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAAA 108 0.11553644211945184 No Hit GAATGATACGGCGACCTGTCTCTTATACACATCTGACGCTTACGCGTTCGT 102 0.10911775089059342 No Hit GGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAAGCGCAAGG 94 0.10055949591878217 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.02139563742952812 0.0 2 0.0 0.0 0.0 0.23000310236742727 0.0 3 0.0 0.0 0.0 0.3070273971137285 0.0 4 0.0 0.0 0.0 0.7049862533029515 0.0 5 0.0 0.0 0.0 1.8164896177669374 0.0 6 0.0 0.0 0.0 2.2722166950158864 0.0 7 0.0 0.0 0.0 2.6519892593900103 0.0 8 0.0 0.0 0.0 3.2029269232003594 0.0 9 0.0 0.0 0.0 3.5666527595023374 0.0 10 0.0 0.0 0.0 6.163013361575575 0.0 11 0.0 0.0 0.0 6.726788407843641 0.0 12 0.0 0.0 0.0 8.429881147234079 0.0 13 0.0 0.0 0.0 8.689838142002845 0.0 14 0.0 0.0 0.0 8.850305422724306 0.0 15 0.0 0.0 0.0 9.109192635621596 0.0 16 0.0 0.0 0.0 9.332777046760166 0.0 17 0.0 0.0 0.0 9.498593236839008 0.0 18 0.0 0.0 0.0 9.630176407030607 0.0 19 0.0 0.0 0.0 10.184323416455385 0.0 20 0.0 0.0 0.0 10.364046770863421 0.0 21 0.0 0.0 0.0 10.487071686083208 0.0 22 0.0 0.0 0.0 10.656097221776479 0.0 23 0.0 0.0 0.0 10.799447992554319 0.0 24 0.0 0.0 0.0 10.937449853974774 0.0 25 0.0 0.0 0.0 11.044428041122416 0.0 26 0.0 0.0 0.0 11.166383174470726 0.0 27 0.0 0.0 0.0 11.312943290862993 0.0 28 0.0 0.0 0.0 11.41778191426768 0.0 29 0.0 0.0 0.0 11.544016175101897 0.0 30 0.0 0.0 0.0 11.68308781839383 0.0 31 0.0 0.0 0.0 11.796484696770328 0.0 32 0.0 0.0 0.0 11.934486558190786 0.0 33 0.0 0.0 0.0 12.032906490366614 0.0 34 0.0 0.0 0.0 12.191234207345122 0.0 35 0.0 0.0 0.0 12.368817998010206 0.0 36 0.0 0.0 0.0 12.49505225884442 0.0 37 0.0 0.0 0.0 12.619146955935685 0.0 38 0.0 0.0 0.0 12.81384725654439 0.0 39 0.0 0.0 0.0 13.207526985247709 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CTAGATA 25 3.8632672E-5 45.000004 19 CGTGGGC 30 2.1440883E-6 45.000004 4 GATACAT 30 2.1440883E-6 45.000004 22 TCACAAT 30 2.1440883E-6 45.000004 41 TTATGGG 25 3.8632672E-5 45.000004 3 TGTGGGC 30 2.1440883E-6 45.000004 4 ACCCTTA 25 3.8632672E-5 45.000004 39 TTATCAC 30 2.1440883E-6 45.000004 38 TATTGGG 50 2.1827873E-11 45.000004 3 AATGATC 30 2.1440883E-6 45.000004 2 AACATGA 30 2.1440883E-6 45.000004 30 ACATGAT 30 2.1440883E-6 45.000004 31 AATTATC 30 2.1440883E-6 45.000004 45 TAGATAC 25 3.8632672E-5 45.000004 20 TGGGCTC 50 2.1827873E-11 45.000004 6 TGGGATC 35 1.1959855E-7 45.000004 6 ATACATC 30 2.1440883E-6 45.000004 23 TCAACAT 30 2.1440883E-6 45.000004 28 ACAACTA 20 7.0000323E-4 45.0 15 CCGGGAT 20 7.0000323E-4 45.0 5 >>END_MODULE