##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2933253.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 505349 Sequences flagged as poor quality 0 Sequence length 51 %GC 31 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 28.96228744887197 31.0 28.0 31.0 16.0 33.0 2 29.284171928706694 31.0 30.0 33.0 16.0 34.0 3 29.363881198933807 31.0 30.0 33.0 16.0 34.0 4 32.64586849879984 35.0 32.0 37.0 19.0 37.0 5 33.969148054117056 35.0 33.0 37.0 30.0 37.0 6 33.35824944741159 35.0 35.0 37.0 26.0 37.0 7 32.87890744812001 35.0 32.0 37.0 27.0 37.0 8 33.509726941183224 35.0 33.0 37.0 28.0 37.0 9 33.70674523942859 35.0 32.0 39.0 26.0 39.0 10 32.902396165818075 37.0 31.0 39.0 17.0 39.0 11 33.76625658703193 37.0 32.0 39.0 23.0 39.0 12 34.30438963963518 37.0 32.0 39.0 27.0 39.0 13 34.57598610069477 37.0 32.0 39.0 27.0 39.0 14 34.65938588975144 38.0 32.0 40.0 24.0 41.0 15 35.27863516104712 38.0 32.0 40.0 27.0 41.0 16 35.44617482175685 38.0 33.0 40.0 27.0 41.0 17 33.60969152011778 37.0 31.0 40.0 19.0 41.0 18 33.975927527312805 37.0 32.0 39.0 25.0 39.0 19 33.57961329694924 37.0 32.0 37.0 25.0 39.0 20 32.83232775764868 35.0 32.0 35.0 25.0 39.0 21 32.914655020589734 35.0 32.0 36.0 25.0 39.0 22 32.62205525290443 34.0 30.0 37.0 25.0 39.0 23 33.76405414871702 35.0 33.0 38.0 27.0 39.0 24 31.940160166538373 34.0 31.0 36.0 21.0 39.0 25 31.108855464243522 34.0 28.0 36.0 18.0 39.0 26 29.766945220036053 33.0 24.0 36.0 18.0 39.0 27 32.01993275934058 34.0 30.0 37.0 22.0 39.0 28 32.11475237904894 35.0 31.0 37.0 21.0 39.0 29 31.92857807178801 35.0 30.0 37.0 21.0 39.0 30 30.997825265311697 34.0 27.0 37.0 18.0 39.0 31 31.37190139883526 34.0 30.0 36.0 18.0 39.0 32 30.871275098990996 35.0 29.0 37.0 15.0 39.0 33 30.034061608907905 35.0 25.0 37.0 10.0 40.0 34 28.46952700015237 34.0 20.0 37.0 7.0 40.0 35 27.589515364629197 33.0 18.0 37.0 7.0 40.0 36 26.736811589614305 33.0 15.0 37.0 7.0 40.0 37 26.699839121082658 33.0 12.0 37.0 7.0 40.0 38 26.698744827831856 33.0 12.0 37.0 7.0 40.0 39 26.40199941030852 33.0 12.0 37.0 7.0 40.0 40 26.292623513650963 33.0 12.0 37.0 7.0 40.0 41 25.979954447322545 32.0 11.0 37.0 7.0 40.0 42 26.11206116960754 32.0 10.0 37.0 7.0 40.0 43 26.164828662963615 33.0 10.0 37.0 7.0 40.0 44 26.023819182386827 32.0 10.0 37.0 7.0 40.0 45 26.14504431590841 33.0 10.0 38.0 7.0 40.0 46 25.912333852446526 32.0 10.0 37.0 7.0 40.0 47 25.88470344257137 32.0 10.0 37.0 7.0 40.0 48 25.62300311270033 32.0 10.0 37.0 7.0 40.0 49 25.272860933730946 31.0 10.0 36.0 7.0 39.0 50 25.455904731185775 32.0 10.0 37.0 7.0 39.0 51 24.293260697062824 29.0 10.0 35.0 7.0 38.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 2.0 9 2.0 10 11.0 11 17.0 12 28.0 13 53.0 14 115.0 15 263.0 16 532.0 17 1102.0 18 2063.0 19 3410.0 20 5592.0 21 8291.0 22 11487.0 23 16207.0 24 22609.0 25 30886.0 26 36838.0 27 34774.0 28 30186.0 29 27515.0 30 28196.0 31 30663.0 32 34280.0 33 37831.0 34 41722.0 35 44556.0 36 33398.0 37 18615.0 38 4028.0 39 77.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 17.820159929078716 1.9548866229081288 28.69264607231834 51.53230737569482 2 52.01217376506138 9.233420863601193 27.50594143849102 11.248463932846409 3 9.249647273468435 9.274184771316458 69.70074146777772 11.775426487437395 4 8.215906235096933 2.0577858074320914 76.22573706487992 13.50057089259106 5 14.259650261502447 2.445636579868566 70.28706893651714 13.007644222111846 6 10.757120326744488 7.646992474507716 71.87508038998791 9.720806808759887 7 42.97999996042339 0.7016932852345606 54.085196567124896 2.2331101872171506 8 44.31036768648993 5.40913309415869 47.750564461392024 2.5299347579593507 9 41.19786523768722 1.9000730188444024 47.42346378443412 9.478597959034252 10 21.570439438882833 15.537381097024037 52.83793972086618 10.054239743226958 11 15.14240653488975 14.033469938596891 59.957969640782906 10.866153885730457 12 12.366107383214372 13.096295827240183 61.35403453850705 13.183562251038392 13 11.798380920908125 13.527087220910698 64.88565328119775 9.788878576983432 14 11.350373702134565 15.385209033756869 60.54785900437124 12.71655825973733 15 9.97073309732482 14.301997233595001 64.4354693489054 11.29180032017477 16 11.172278959689244 14.792747190555438 59.11498785987506 14.91998598988026 17 11.308620379183495 15.13449121300329 61.966284686424636 11.590603721388584 18 11.574575194568506 14.380754686365266 60.74138862449515 13.30328149457108 19 11.254598307308415 17.060289027978683 58.07412303180575 13.610989632907158 20 12.93818727255817 16.306354618293494 61.05067982720852 9.704778281939808 21 13.031785953865546 18.133013026640995 58.657086488743424 10.178114530750037 22 11.7168531054776 14.017441411776813 60.246087357449994 14.019618125295588 23 11.625629020736165 18.008544589976434 59.41181243061726 10.954013958670147 24 12.363732786648434 15.247482432932488 59.02712778693536 13.361656993483711 25 11.156250432869165 18.977379988878972 57.30495162748912 12.56141795076274 26 11.733871047533487 15.8266861119741 59.548945382300154 12.89049745819226 27 12.674607053739098 16.011113111928587 57.68053365100159 13.633746183330727 28 10.906324144304232 16.692424443305516 59.808963706270326 12.592287706119928 29 15.288048457600588 14.79136200922531 57.09618501273377 12.82440452044033 30 13.943631035185586 16.961545387445113 57.49768971542439 11.597133861944913 31 13.64324456959448 17.465157742471042 55.57090248521319 13.32069520272129 32 14.222844014730414 19.528286392176497 54.10359969051092 12.145269902582175 33 12.772757045131186 18.10570516613271 51.52122592505377 17.60031186368233 34 16.099764717056924 21.22374834025594 49.39061915626626 13.28586778642087 35 15.034362391139588 23.90803187500124 45.366865275285 15.690740458574174 36 17.398669038624792 24.043581762306843 43.030460137449566 15.527289061618802 37 16.791959616027736 25.27243548517955 43.248725138468664 14.686879760324054 38 16.757527965821637 24.4535954360254 42.148297513203744 16.640579084949213 39 18.11223530668904 23.22335653182256 43.46857320386505 15.195834957623344 40 18.03110325735284 24.45676156477998 42.06419721816012 15.447937959707053 41 19.240762324650884 23.933360905037905 42.04144066773656 14.784436102574656 42 17.170707768294783 24.856485320046147 42.92558212245399 15.047224789205085 43 19.906243012254897 22.021414903363816 40.86245347274854 17.209888611632753 44 19.365032878268284 23.095721966403417 39.855624528791 17.683620626537305 45 16.93423752693683 22.921782767948486 40.805265272118874 19.33871443299581 46 18.966496421285093 24.106706454351347 39.181239104064716 17.745558020298844 47 16.588733726592906 21.789298089043413 43.71216723492082 17.90980094944286 48 18.04060164361659 22.831350215395695 39.8324722122731 19.295575928714612 49 16.46485893906983 22.62654126158358 41.07260526883401 19.835994530512576 50 17.423008653425654 21.2583778735092 41.15729921301912 20.16131426004603 51 17.61673615659673 21.105612161100545 39.89322230775167 21.384429374551054 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 53.0 1 332.5 2 612.0 3 26801.5 4 52991.0 5 37233.0 6 21475.0 7 20384.0 8 19293.0 9 19048.5 10 18804.0 11 18643.5 12 18483.0 13 17729.5 14 16976.0 15 16036.5 16 15097.0 17 14455.5 18 13814.0 19 12708.5 20 11603.0 21 10742.5 22 9882.0 23 9211.5 24 8541.0 25 8105.5 26 7525.0 27 7380.0 28 7710.0 29 8040.0 30 8357.0 31 8674.0 32 9249.0 33 9824.0 34 10699.0 35 11574.0 36 12442.5 37 13311.0 38 13853.0 39 14395.0 40 14993.5 41 15592.0 42 16486.5 43 17381.0 44 18555.0 45 19729.0 46 32435.0 47 45141.0 48 37034.0 49 28927.0 50 26486.0 51 24045.0 52 21007.5 53 17970.0 54 15964.5 55 13959.0 56 12365.0 57 10771.0 58 9402.5 59 8034.0 60 6823.5 61 5613.0 62 4698.5 63 3784.0 64 2982.5 65 2181.0 66 1694.0 67 1207.0 68 929.0 69 651.0 70 527.5 71 404.0 72 383.0 73 362.0 74 385.5 75 397.5 76 386.0 77 297.5 78 209.0 79 132.5 80 56.0 81 41.0 82 26.0 83 19.0 84 12.0 85 8.0 86 4.0 87 2.5 88 1.0 89 1.0 90 1.0 91 1.5 92 2.0 93 1.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 505349.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 61.319241903771335 #Duplication Level Percentage of deduplicated Percentage of total 1 85.27620060128906 52.29071973304975 2 8.287822360707786 10.16405968383452 3 3.1220372956900633 5.743228805010453 4 1.3937836691348493 3.418630318768232 5 0.6836767100851122 2.096126878484177 6 0.36994004411591774 1.361066583302148 7 0.22069185518925494 0.9472860078179398 8 0.12840331395601193 0.6298875095771675 9 0.07771038533005072 0.42886277248397975 >10 0.3538100862890034 3.987734633409157 >50 0.04066616843261976 1.7950032068063955 >100 0.03869845039183458 4.348750189320909 >500 0.003935435633067923 1.4485108723088327 >1k 0.0016397648471116345 1.918477540167467 >5k 6.559059388446539E-4 2.716234395706706 >10k+ 3.279529694223269E-4 6.705420869952203 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 33344 6.598212324551943 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCGGAACTAGTCGTATGCCG 8193 1.621255805393896 No Hit GAATCTGTCTCTTATACACATCTGACGCGGAACTAGTCGTATGCCGTCTTC 5314 1.0515505126160336 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCGGAACTAGTCGTATGC 4406 0.8718727057934219 No Hit GAACTGTCTCTTATACACATCTGACGCGGAACTAGTCGTATGCCGTCTTCT 1660 0.32848585828803456 No Hit GCTGTCTCTTATACACATCTGACGCGGAACTAGTCGTATGCCGTCTTCTGC 1279 0.2530924173195158 No Hit GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCGGAACTAGT 1144 0.22637820595271782 No Hit GAATGATCTGTCTCTTATACACATCTGACGCGGAACTAGTCGTATGCCGTC 1051 0.20797508256670144 No Hit GAATGCTGTCTCTTATACACATCTGACGCGGAACTAGTCGTATGCCGTCTT 834 0.16503446133266317 No Hit GAATGATACCTGTCTCTTCTACACATCTGACGCGGAACTAGTCGTATGCCG 702 0.13891389910734958 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTA 674 0.1333731737868285 No Hit GAATGATACGGCGACTGTCTCTTATACACATCTGACGCGGAACTAGTCGTA 632 0.1250620858060469 No Hit GAATGACTGTCTCTTATACACATCTGACGCGGAACTAGTCGTATGCCGTCT 630 0.12466631971172397 No Hit GAATCTTTCTCTTATACACATCTGACGCGGAACTAGTCGTATGCCGTCTTC 572 0.11318910297635891 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAAA 564 0.11160603859906718 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTC 543 0.10745049460867638 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCGGAACTAGTCGTATGCC 515 0.10190976928815532 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTG 515 0.10190976928815532 No Hit GAATGCTGCCTCTTATACACATCTGACGCGGAACTAGTCGTATGCCGTCTT 514 0.10171188624099384 No Hit CGTTTTCTGTCTCTTATACACATCTGACGCGGAACTAGTCGTATGCCGTCT 508 0.10052458795802505 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.06094797852573172 0.0 2 0.0 0.0 0.0 0.4199078260766322 0.0 3 0.0 0.0 0.0 0.5564471286180441 0.0 4 0.0 0.0 0.0 1.1502941531496056 0.0 5 0.0 0.0 0.0 2.6314487611531834 0.0 6 0.0 0.0 0.0 3.2148079841851867 0.0 7 0.0 0.0 0.0 3.7524562233228917 0.0 8 0.0 0.0 0.0 4.355207984976719 0.0 9 0.0 0.0 0.0 4.7111995868201975 0.0 10 0.0 0.0 0.0 6.897807257954404 0.0 11 0.0 0.0 0.0 7.323255809351557 0.0 12 0.0 0.0 0.0 8.625722025768331 0.0 13 0.0 0.0 0.0 8.851704465626725 0.0 14 0.0 0.0 0.0 8.98606705464936 0.0 15 0.0 0.0 0.0 9.241336185487652 0.0 16 0.0 0.0 0.0 9.41230713823516 0.0 17 0.0 0.0 0.0 9.570613575964334 1.9788304716146664E-4 18 0.0 0.0 0.0 9.721400457901371 1.9788304716146664E-4 19 0.0 0.0 0.0 10.126862821535216 1.9788304716146664E-4 20 0.0 0.0 0.0 10.269140732444312 1.9788304716146664E-4 21 0.0 0.0 0.0 10.410231345070436 1.9788304716146664E-4 22 0.0 0.0 0.0 10.594658345024923 1.9788304716146664E-4 23 0.0 0.0 0.0 10.743070630396023 1.9788304716146664E-4 24 0.0 0.0 0.0 10.862987756975873 1.9788304716146664E-4 25 0.0 0.0 0.0 10.9773641582352 1.9788304716146664E-4 26 0.0 0.0 0.0 11.10024953052247 1.9788304716146664E-4 27 0.0 0.0 0.0 11.219770891007997 1.9788304716146664E-4 28 0.0 0.0 0.0 11.328606566946803 1.9788304716146664E-4 29 0.0 0.0 0.0 11.451096173139751 1.9788304716146664E-4 30 0.0 0.0 0.0 11.587635475681163 1.9788304716146664E-4 31 0.0 0.0 0.0 11.713489093675856 1.9788304716146664E-4 32 0.0 0.0 0.0 11.853788174113335 1.9788304716146664E-4 33 0.0 0.0 0.0 11.986369815711518 1.9788304716146664E-4 34 0.0 0.0 0.0 12.12429429958306 1.9788304716146664E-4 35 0.0 0.0 0.0 12.272112935812675 1.9788304716146664E-4 36 0.0 0.0 0.0 12.407662823118281 1.9788304716146664E-4 37 0.0 0.0 0.0 12.555679342395058 1.9788304716146664E-4 38 0.0 0.0 0.0 12.722098985057851 1.9788304716146664E-4 39 0.0 0.0 0.0 12.904942920635046 1.9788304716146664E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGGCTGC 70 0.0 45.000004 9 TTGTGCG 40 6.8012014E-9 45.0 1 CGACCCT 20 7.02953E-4 45.0 12 TTCGTCG 20 7.02953E-4 45.0 1 CTACGGG 20 7.02953E-4 45.0 3 TCTCGCG 25 3.887692E-5 45.0 1 TCGTCGG 20 7.02953E-4 45.0 2 CGGTGTC 40 6.8012014E-9 45.0 19 CGTTTTT 21320 0.0 44.72561 1 CACCGGT 85 0.0 42.35294 16 GATACCT 1085 0.0 42.304146 5 GACCGCC 70 0.0 41.785717 13 CTACGGC 70 0.0 41.785717 6 TGATACC 1105 0.0 41.538464 4 GGACCGA 120 0.0 41.250004 8 ACGGCTG 650 0.0 41.19231 8 GTTTTTT 23630 0.0 40.57237 2 TACGGCT 660 0.0 40.568184 7 ATACCTG 1120 0.0 40.379467 6 GAATGAC 145 0.0 40.344826 1 >>END_MODULE