##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2933252.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 396214 Sequences flagged as poor quality 0 Sequence length 51 %GC 38 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 29.507208225857745 31.0 28.0 33.0 25.0 34.0 2 28.86952253075358 31.0 28.0 33.0 16.0 34.0 3 28.86138551388896 31.0 28.0 34.0 16.0 34.0 4 33.20602755076802 35.0 32.0 37.0 28.0 37.0 5 34.224896141983876 35.0 33.0 37.0 30.0 37.0 6 33.83198978329892 35.0 33.0 37.0 28.0 37.0 7 33.60043562317333 35.0 32.0 37.0 29.0 37.0 8 33.62744627903103 35.0 33.0 37.0 28.0 37.0 9 34.755197948583344 37.0 34.0 39.0 28.0 39.0 10 34.46701529981273 37.0 32.0 39.0 27.0 39.0 11 34.61298692120925 37.0 33.0 39.0 27.0 39.0 12 34.697729005032635 37.0 33.0 39.0 27.0 39.0 13 34.83132095281842 37.0 34.0 39.0 27.0 39.0 14 35.70446021594391 38.0 34.0 40.0 27.0 41.0 15 36.024368144487575 38.0 34.0 40.0 27.0 41.0 16 35.92821303638942 38.0 34.0 40.0 27.0 41.0 17 35.221536846249755 37.0 33.0 40.0 27.0 41.0 18 34.96489270949537 37.0 33.0 39.0 27.0 40.0 19 34.24943086311943 37.0 33.0 37.0 27.0 40.0 20 33.60974877212819 35.0 32.0 37.0 27.0 39.0 21 33.881700293275856 35.0 33.0 38.0 27.0 40.0 22 34.435873038307584 35.0 33.0 38.0 28.0 40.0 23 34.83190144719773 35.0 33.0 39.0 30.0 40.0 24 34.25528628468454 35.0 33.0 38.0 27.0 40.0 25 33.353521076993744 35.0 32.0 38.0 24.0 40.0 26 33.30281363101758 35.0 32.0 38.0 24.0 40.0 27 34.00895728066146 35.0 33.0 38.0 25.0 40.0 28 33.798974796448384 35.0 33.0 38.0 24.0 40.0 29 33.794469655287294 35.0 33.0 39.0 24.0 40.0 30 33.020340018272954 35.0 32.0 38.0 21.0 40.0 31 32.88339129864164 35.0 32.0 38.0 21.0 40.0 32 32.21006072475985 35.0 31.0 38.0 18.0 40.0 33 31.57258451240996 35.0 30.0 39.0 13.0 40.0 34 30.945112994492874 35.0 28.0 39.0 10.0 40.0 35 30.295353016299273 35.0 24.0 39.0 8.0 40.0 36 29.76791834715583 35.0 23.0 39.0 7.0 40.0 37 29.588964549460645 35.0 22.0 39.0 7.0 40.0 38 29.29176657059064 35.0 21.0 39.0 7.0 40.0 39 28.92242828370527 35.0 20.0 38.0 7.0 40.0 40 28.568081895137475 34.0 18.0 38.0 7.0 40.0 41 28.15424240435724 34.0 18.0 38.0 7.0 40.0 42 28.31414589085696 34.0 18.0 38.0 7.0 40.0 43 28.177328413433145 34.0 18.0 38.0 7.0 40.0 44 28.24755308999682 34.0 18.0 38.0 7.0 40.0 45 28.30362127537139 34.0 18.0 38.0 7.0 40.0 46 28.1246195237927 34.0 18.0 38.0 7.0 40.0 47 27.950362682792633 34.0 18.0 38.0 7.0 40.0 48 27.86547168954151 34.0 18.0 38.0 7.0 40.0 49 27.981843145370934 34.0 18.0 38.0 7.0 40.0 50 28.006915454779488 34.0 18.0 38.0 7.0 40.0 51 26.733838279313705 32.0 16.0 36.0 7.0 39.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 8.0 9 30.0 10 40.0 11 30.0 12 34.0 13 37.0 14 67.0 15 158.0 16 208.0 17 465.0 18 953.0 19 1638.0 20 2590.0 21 4063.0 22 5736.0 23 8360.0 24 11723.0 25 17221.0 26 21772.0 27 23081.0 28 21275.0 29 19768.0 30 20078.0 31 21473.0 32 24670.0 33 27839.0 34 30022.0 35 33699.0 36 35570.0 37 34721.0 38 25276.0 39 3608.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 25.180584229734436 2.28588591013947 31.240188383045524 41.29334147708057 2 40.46247734809976 14.750614566875475 31.02818174017072 13.758726344854043 3 11.894077442997975 14.957321043678414 59.060002927710784 14.088598585612825 4 10.456470493218312 2.761134134583836 70.60023118819629 16.182164184001575 5 19.325919831202327 3.2015526962701975 60.6598959148339 16.81263155769357 6 13.562367811334278 12.171452800759186 63.3501087795989 10.916070608307631 7 50.87654651274312 1.2102045864103743 45.37144068609388 2.5418082147526335 8 50.22235458615798 8.803071067655358 37.87852019363274 3.096054152553923 9 47.32871629977739 2.3835603991782217 36.93660496600322 13.351118335041164 10 31.07689279025981 14.457843488619787 42.71025254029388 11.755011180826523 11 25.57254413019227 13.785227175213393 47.091723159706625 13.550505534887714 12 19.67295451447955 12.92937654903663 50.903299731963024 16.49436920452079 13 18.230047398628013 13.652975412277204 56.09695770467474 12.020019484420036 14 14.885137829556754 18.31207377831172 51.7220491956367 15.080739196494825 15 13.323860338100118 12.95663454597768 58.60746970071729 15.112035415204913 16 16.606177469751195 15.612774914566371 48.54220194137512 19.23884567430732 17 16.17560207362688 16.005239592745333 52.58471432104873 15.23444401257906 18 17.22074434522758 14.58832852953202 50.94772017142252 17.243206953817886 19 16.025935479311684 17.68084923803803 47.99199422534287 18.301221057307416 20 17.924656877344063 18.69242379118355 51.78565118849915 11.597268142973242 21 17.10287874734361 20.84353404978118 49.93135022992625 12.122236972948961 22 15.166046631365878 13.161321911896096 53.21038630638998 18.462245150348046 23 16.268228785454326 18.65380829551707 52.138238426708796 12.939724492319806 24 18.249228952030975 16.18872629437627 48.876112403902944 16.685932349689814 25 16.436067377730215 22.395220764536337 45.82675019055359 15.341961667179858 26 15.22434845815645 14.175925131368402 50.601695043587554 19.99803136688759 27 17.195505459171052 15.328080279848768 48.96672000484587 18.509694256134313 28 13.615117083192416 17.891341547749448 50.167586203415325 18.32595516564281 29 20.575749468721447 15.751084010156127 46.891578793278384 16.781587727844045 30 17.592765525700756 17.708107234979074 51.81467590746415 12.884451331856017 31 22.566340411999576 14.504283038963791 45.62635343526478 17.30302311377185 32 21.339478160791895 17.695235403090248 44.02847955902619 16.936806877091673 33 19.405927100001513 19.33601538562494 41.14140338302029 20.116654131353258 34 24.443608756883904 18.68359018106377 42.588348720640866 14.28445234141146 35 16.596586693049716 22.65215262459176 44.23266214722347 16.518598535135055 36 23.218765616560745 25.853200543140826 35.373055974801495 15.554977865496927 37 19.127542186798046 22.4136451513576 39.93018924116765 18.528623420676706 38 22.936594870448797 24.790643440161126 35.15171094408577 17.121050745304306 39 25.08997662879151 20.985628978279415 34.303179594865405 19.621214798063672 40 21.82381238421661 22.381339377205247 39.23081970854134 16.564028530036797 41 21.489901921688784 25.810042047984172 33.77265820995724 18.9273978203698 42 19.277965947694934 21.938396926913235 40.528603229567864 18.255033895823974 43 21.97474092283463 22.01083252989546 34.76101298793077 21.253413559339148 44 22.927256482607884 20.910669486691535 34.46647518765112 21.695598843049464 45 20.585592634283493 20.313012664873025 34.09218250743285 25.00921219341063 46 23.278581776514713 22.691020509118808 32.679814443709716 21.350583270656767 47 16.670031851474203 22.627418516256366 40.96927418011479 19.733275452154643 48 20.22089073076671 23.959526922319757 33.44303835805903 22.376543988854507 49 19.20376362268875 20.977047757020195 38.83204530884825 20.987143311442807 50 19.37538804787312 20.803404220951304 36.5118345136719 23.309373217503673 51 19.29134255730489 20.26808744769241 34.7600034324885 25.680566562514194 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 39.0 1 712.0 2 1385.0 3 15406.5 4 29428.0 5 21513.0 6 13598.0 7 12937.0 8 12276.0 9 11813.5 10 11351.0 11 10674.5 12 9998.0 13 9324.5 14 8651.0 15 7926.0 16 7201.0 17 6692.0 18 6183.0 19 5730.5 20 5278.0 21 4998.5 22 4719.0 23 4469.5 24 4220.0 25 4299.0 26 4501.0 27 4624.0 28 4966.0 29 5308.0 30 5531.5 31 5755.0 32 6031.5 33 6308.0 34 6761.0 35 7214.0 36 7363.5 37 7513.0 38 7771.0 39 8029.0 40 8390.5 41 8752.0 42 9088.5 43 9425.0 44 10825.5 45 12226.0 46 30555.0 47 48884.0 48 34835.5 49 20787.0 50 19924.0 51 19061.0 52 18069.0 53 17077.0 54 17323.5 55 17570.0 56 17264.5 57 16959.0 58 16303.0 59 15647.0 60 14111.0 61 12575.0 62 11419.5 63 10264.0 64 8860.0 65 7456.0 66 6204.5 67 4953.0 68 4211.5 69 3470.0 70 2972.5 71 2475.0 72 2180.0 73 1885.0 74 1639.0 75 1186.0 76 979.0 77 739.0 78 499.0 79 374.0 80 249.0 81 171.0 82 93.0 83 66.5 84 40.0 85 28.5 86 17.0 87 15.5 88 14.0 89 9.0 90 4.0 91 3.0 92 2.0 93 2.0 94 2.0 95 1.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 396214.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 54.74671908907723 #Duplication Level Percentage of deduplicated Percentage of total 1 80.5254022273344 44.0850157527483 2 9.437539085611245 10.333486024242914 3 4.350140603667008 7.144677768808395 4 2.3334595706001147 5.109970224694529 5 1.217873335603486 3.333728469518076 6 0.6796599043144309 2.2325489914566754 7 0.37292449953652085 1.4291474972292433 8 0.22497437715498586 0.9853287222675301 9 0.13556441055746868 0.6679536032939467 >10 0.6177467796658503 6.051360215032064 >50 0.06404456792752498 2.395241334644817 >100 0.035060894850809085 3.2262434303361114 >500 4.674785980107878E-4 0.15893203000465853 >1k 0.0032723501860755146 2.7888604363297325 >5k 9.349571960215756E-4 3.723513855938449 >10k+ 9.349571960215756E-4 6.3339916434545795 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 14288 3.6061320397562935 No Hit GAATCTGTCTCTTATACACATCTGACGCGTGCAGTATCGTATGCCGTCTTC 10461 2.6402398703730814 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCGTGCAGTATCGTATGCCG 7987 2.0158298293346526 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCGTGCAGTATCGTATGC 6562 1.656175703029171 No Hit GAACTGTCTCTTATACACATCTGACGCGTGCAGTATCGTATGCCGTCTTCT 2597 0.6554538708879545 No Hit GAATGATCTGTCTCTTATACACATCTGACGCGTGCAGTATCGTATGCCGTC 1729 0.4363803399173174 No Hit GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCGTGCAGTAT 1480 0.3735355136365701 No Hit GCTGTCTCTTATACACATCTGACGCGTGCAGTATCGTATGCCGTCTTCTGC 1447 0.3652066812379169 TruSeq Adapter, Index 15 (95% over 23bp) GAATGACTGTCTCTTATACACATCTGACGCGTGCAGTATCGTATGCCGTCT 1260 0.3180099643122151 No Hit GAATGATACGGCGACTGTCTCTTATACACATCTGACGCGTGCAGTATCGTA 1193 0.3010999106543434 No Hit GAATGCTGTCTCTTATACACATCTGACGCGTGCAGTATCGTATGCCGTCTT 1191 0.3005951329332129 No Hit GAATGATACGGCGACCTGTCTCTTATACACATCTGACGCGTGCAGTATCGT 621 0.1567334824110203 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTA 481 0.12139904193188529 No Hit CTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 447 0.1128178206726668 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAAA 431 0.10877959890362278 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 2.5238886056525007E-4 0.0 0.0 0.04139177313270102 0.0 2 2.5238886056525007E-4 0.0 0.0 0.4631335591372339 0.0 3 2.5238886056525007E-4 0.0 0.0 0.5597984927337247 0.0 4 2.5238886056525007E-4 0.0 0.0 1.351289959466349 0.0 5 2.5238886056525007E-4 0.0 0.0 4.504383994508018 0.0 6 2.5238886056525007E-4 0.0 0.0 4.951869444290207 0.0 7 2.5238886056525007E-4 0.0 0.0 5.437465612017748 0.0 8 2.5238886056525007E-4 0.0 0.0 6.076766595829526 0.0 9 2.5238886056525007E-4 0.0 0.0 6.254195964806898 0.0 10 2.5238886056525007E-4 0.0 0.0 8.924217720726679 0.0 11 2.5238886056525007E-4 0.0 0.0 9.140767363091662 0.0 12 2.5238886056525007E-4 0.0 0.0 11.335288505706512 0.0 13 2.5238886056525007E-4 0.0 0.0 11.515746541010666 0.0 14 2.5238886056525007E-4 0.0 0.0 11.652288914576467 0.0 15 2.5238886056525007E-4 0.0 0.0 12.06014931324991 0.0 16 2.5238886056525007E-4 0.0 0.0 12.301685452810855 0.0 17 2.5238886056525007E-4 0.0 0.0 12.424851216766697 0.0 18 2.5238886056525007E-4 0.0 0.0 12.502334596960228 0.0 19 2.5238886056525007E-4 0.0 0.0 13.044718258314951 0.0 20 5.047777211305001E-4 0.0 0.0 13.166622077967967 0.0 21 5.047777211305001E-4 0.0 0.0 13.251172346257325 0.0 22 5.047777211305001E-4 0.0 0.0 13.448540435219352 0.0 23 5.047777211305001E-4 0.0 0.0 13.529052481739665 0.0 24 5.047777211305001E-4 0.0 0.0 13.615874249774112 0.0 25 5.047777211305001E-4 0.0 0.0 13.673418909982988 0.0 26 5.047777211305001E-4 0.0 0.0 13.773112509906262 0.0 27 5.047777211305001E-4 0.0 0.0 13.935650936110283 0.0 28 5.047777211305001E-4 0.0 0.0 14.015910593770034 0.0 29 5.047777211305001E-4 0.0 0.0 14.099956084338261 0.0 30 5.047777211305001E-4 0.0 0.0 14.216559737919408 0.0 31 5.047777211305001E-4 0.0 0.0 14.304895839117245 0.0 32 5.047777211305001E-4 0.0 0.0 14.421751881558956 0.0 33 5.047777211305001E-4 0.0 0.0 14.521193092621663 0.0 34 5.047777211305001E-4 0.0 0.0 14.691555573503209 0.0 35 5.047777211305001E-4 0.0 0.0 14.832388557698618 0.0 36 5.047777211305001E-4 0.0 0.0 14.953787599630502 0.0 37 5.047777211305001E-4 0.0 0.0 15.082758307379345 0.0 38 5.047777211305001E-4 0.0 0.0 15.280126396341371 0.0 39 5.047777211305001E-4 0.0 0.0 15.651390410232853 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TCCGTTG 35 1.2092278E-7 45.000004 1 ACATACG 60 0.0 45.000004 17 TCGTTAG 20 7.0276856E-4 45.0 1 GTACCGT 20 7.0276856E-4 45.0 37 ACCGGTC 20 7.0276856E-4 45.0 17 GATCAAT 20 7.0276856E-4 45.0 9 TGCGTTG 25 3.886163E-5 45.0 1 GTTGCGT 20 7.0276856E-4 45.0 39 CGTTTTT 11505 0.0 44.4133 1 AATGATC 235 0.0 42.12766 2 GATACCT 1000 0.0 41.85 5 TGATACC 1000 0.0 41.624996 4 CCGATGA 330 0.0 41.590908 18 ATACCTG 1040 0.0 40.67308 6 GAATCTG 1300 0.0 40.673077 1 TACGGCT 820 0.0 40.335365 7 ATGATCT 225 0.0 40.0 3 CGATGAA 350 0.0 39.857143 19 ACGGCTG 830 0.0 39.8494 8 AATCTGT 1330 0.0 39.755642 2 >>END_MODULE