SRR2933247.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2933247.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	249736
Sequences flagged as poor quality	0
Sequence length	51
%GC	35

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	16544	6.624595572925009	No Hit
GAATGATACCTGTCTCTTATACACATCTGACGCTATCGCGATCGTATGCCG	3383	1.354630489797226	No Hit
GAATGATACGGCTGTCTCTTATACACATCTGACGCTATCGCGATCGTATGC	2543	1.0182752987154435	No Hit
GAATCTGTCTCTTATACACATCTGACGCTATCGCGATCGTATGCCGTCTTC	2339	0.9365890380241535	No Hit
GAACTGTCTCTTATACACATCTGACGCTATCGCGATCGTATGCCGTCTTCT	776	0.31072812890412277	No Hit
GCTGTCTCTTATACACATCTGACGCTATCGCGATCGTATGCCGTCTTCTGC	579	0.2318448281385143	No Hit
GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCTATCGCGAT	558	0.22343594836146974	No Hit
GAATGATCTGTCTCTTATACACATCTGACGCTATCGCGATCGTATGCCGTC	427	0.1709805554665727	No Hit
GAATGCTGTCTCTTATACACATCTGACGCTATCGCGATCGTATGCCGTCTT	331	0.1325399622000833	No Hit
GAATGATACGGCGACTGTCTCTTATACACATCTGACGCTATCGCGATCGTA	311	0.12453150526956465	No Hit
GAATGACTGTCTCTTATACACATCTGACGCTATCGCGATCGTATGCCGTCT	273	0.10931543710157927	No Hit
GAATGATACCTGTCTCTTCTACACATCTGACGCTATCGCGATCGTATGCCG	272	0.10891501425505333	No Hit
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTA	257	0.10290867155716436	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
ACATACG	30	2.1586548E-6	45.000004	17
CTTGTCG	20	7.0226716E-4	45.0	1
GGCACGT	20	7.0226716E-4	45.0	11
CATGATA	20	7.0226716E-4	45.0	2
TCGATCA	20	7.0226716E-4	45.0	17
CCCACGA	20	7.0226716E-4	45.0	39
AGGCACG	20	7.0226716E-4	45.0	10
CCCCACG	20	7.0226716E-4	45.0	38
CTCGATC	20	7.0226716E-4	45.0	16
CGGTAGG	25	3.8820097E-5	45.0	31
TGTACGG	20	7.0226716E-4	45.0	2
CGCCCAA	20	7.0226716E-4	45.0	38
ACGACGA	20	7.0226716E-4	45.0	34
CGTTTTT	7550	0.0	44.642384	1
CGACCAC	195	0.0	43.846153	12
TACGGCT	315	0.0	42.857143	7
GATACCT	450	0.0	42.0	5
GCGACCA	205	0.0	41.70732	11
TGATACC	460	0.0	41.086956	4
ATGATAC	1150	0.0	41.086956	3