##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2933247.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 249736 Sequences flagged as poor quality 0 Sequence length 51 %GC 35 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 29.127967133292756 31.0 28.0 31.0 23.0 34.0 2 29.506330685203576 31.0 30.0 33.0 16.0 34.0 3 29.655456161706763 31.0 30.0 34.0 16.0 34.0 4 32.497209052759715 35.0 32.0 37.0 19.0 37.0 5 33.91166672005638 35.0 33.0 37.0 30.0 37.0 6 33.34783931832015 35.0 35.0 37.0 27.0 37.0 7 32.29159192106865 35.0 32.0 35.0 25.0 37.0 8 33.4865257712144 35.0 33.0 37.0 28.0 37.0 9 33.3927507447865 35.0 32.0 37.0 26.0 39.0 10 31.794815324983183 35.0 27.0 39.0 15.0 39.0 11 32.69120190921613 37.0 30.0 39.0 17.0 39.0 12 33.45246179966044 37.0 31.0 39.0 23.0 39.0 13 33.67396770990165 37.0 32.0 39.0 25.0 39.0 14 33.90603677483423 37.0 32.0 40.0 21.0 41.0 15 34.54417464842874 37.0 32.0 40.0 25.0 41.0 16 34.75584617355928 37.0 32.0 40.0 25.0 41.0 17 32.87863984367492 36.0 30.0 40.0 18.0 41.0 18 33.517330300797646 36.0 31.0 39.0 24.0 39.0 19 33.25567799596374 37.0 32.0 37.0 23.0 39.0 20 32.96824646827049 35.0 31.0 37.0 25.0 39.0 21 33.16058157414229 35.0 32.0 37.0 25.0 39.0 22 33.33593074286446 35.0 31.0 38.0 26.0 39.0 23 34.44458147804081 35.0 33.0 38.0 28.0 40.0 24 32.693852708460135 35.0 31.0 37.0 23.0 39.0 25 31.724228785597592 35.0 30.0 37.0 18.0 39.0 26 30.95301438318865 33.0 25.0 37.0 20.0 39.0 27 32.83461735592786 35.0 31.0 38.0 23.0 39.0 28 32.88642005958292 35.0 31.0 38.0 23.0 39.0 29 33.155215907998844 35.0 31.0 38.0 22.0 40.0 30 32.01439119710414 35.0 30.0 38.0 20.0 40.0 31 32.36560207579203 35.0 30.0 38.0 21.0 40.0 32 32.17465643719768 35.0 31.0 38.0 20.0 40.0 33 32.01512797514175 35.0 31.0 38.0 16.0 40.0 34 31.025038440593267 35.0 30.0 38.0 12.0 40.0 35 30.332567190953647 35.0 27.0 38.0 9.0 40.0 36 29.724224781369127 35.0 24.0 38.0 7.0 40.0 37 29.757167568952813 35.0 24.0 38.0 7.0 40.0 38 29.76598888426178 35.0 23.0 38.0 7.0 40.0 39 29.317855655572284 35.0 23.0 38.0 7.0 40.0 40 29.077113431783964 34.0 22.0 38.0 7.0 40.0 41 28.64809238555915 34.0 21.0 38.0 7.0 40.0 42 29.014235032193998 34.0 22.0 38.0 7.0 40.0 43 29.011544190665344 34.0 21.0 38.0 7.0 40.0 44 28.940557228433224 34.0 21.0 38.0 7.0 40.0 45 29.18352580324823 35.0 22.0 38.0 7.0 40.0 46 28.92217381554922 34.0 21.0 38.0 7.0 40.0 47 28.89470480827754 34.0 20.0 38.0 7.0 40.0 48 28.71901928436429 34.0 21.0 38.0 7.0 40.0 49 28.419390876765863 34.0 20.0 37.0 7.0 40.0 50 28.608955056539706 34.0 20.0 38.0 7.0 40.0 51 27.116843386616267 32.0 19.0 36.0 7.0 39.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 3.0 9 12.0 10 12.0 11 11.0 12 24.0 13 24.0 14 36.0 15 78.0 16 181.0 17 334.0 18 581.0 19 1028.0 20 1639.0 21 2410.0 22 3483.0 23 5114.0 24 7388.0 25 10498.0 26 13513.0 27 14411.0 28 13595.0 29 13560.0 30 14357.0 31 16489.0 32 19071.0 33 21859.0 34 25108.0 35 28319.0 36 21845.0 37 12025.0 38 2685.0 39 43.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 19.167040394656755 2.3080372873754684 36.20343082294903 42.32149149501873 2 42.10045808373643 9.060768171188775 35.08304769836948 13.755726046705322 3 12.435131498862798 9.067575359579717 64.51572860941154 13.981564532145946 4 11.27951116378896 2.788945126053112 69.15062305794919 16.780920652208735 5 16.55868597238684 3.271054233270333 63.657222026459934 16.513037767882885 6 13.852628375564596 8.200659896851075 65.79147579844316 12.155235929141172 7 54.02144664765993 1.0479065893583626 42.34751898004293 2.5831277829387833 8 56.055995130858186 5.5038120254989265 35.81902489028414 2.621167953358747 9 52.430566678412404 2.44858570650607 35.84425152961527 9.276596085466252 10 28.42201364641061 19.315196847871352 41.09900054457507 11.163788961142968 11 20.389931767946955 16.38089822852933 50.49892686677131 12.730243136752412 12 17.11687542044399 15.383845340679759 52.124643623666586 15.37463561520966 13 15.630505814139731 15.933225486113336 55.92705897427683 12.509209725470097 14 14.279879552807765 17.26543229650511 52.534676618509145 15.92001153217798 15 12.45475221834257 15.75183393663709 56.991783323189296 14.801630521831052 16 15.16321235224397 15.868757407822661 50.574206361918186 18.393823878015183 17 14.826056315469135 16.306820001922027 53.34833584264984 15.518787839958998 18 15.222474933529808 15.610484671813435 52.613559919274756 16.553480475382003 19 15.13558317583368 17.96216804946023 50.17538520677836 16.726863567927733 20 16.539065252907072 18.157173975718358 52.61756414774001 12.686196623634558 21 16.62395489637057 19.635935547938622 50.316334048755486 13.423775506935323 22 15.434699042188551 15.485152320850817 51.98970112438735 17.090447512573277 23 14.960598391901847 19.77007720152481 51.06992984591729 14.199394560656053 24 15.196847871352148 17.179741807348563 51.09956113656021 16.523849184739085 25 14.685107473492007 20.667424800589423 48.69221898324631 15.955248742672262 26 14.287487586891759 17.753147323573693 51.15441906653426 16.80494602300029 27 14.831662235320497 18.007415831117658 49.764551366242756 17.39637056731909 28 12.6605695614569 18.449883076528813 52.613559919274756 16.275987442739535 29 15.296152737290578 16.957507127526668 50.70594547842522 17.040394656757535 30 14.711134958516192 19.77408142999007 51.06992984591729 14.444853765576449 31 15.714194189063651 17.85485472659128 49.56033571451452 16.870615369830542 32 17.23099593170388 19.332014607425442 47.45891661594644 15.97807284492424 33 16.6059358682769 19.137008681167313 44.97709581317872 19.27995963737707 34 16.98673799532306 20.758320786750808 45.731892878880096 16.52304833904603 35 16.74968767017971 24.78337124002947 41.44216292404779 17.024778165743022 36 17.385959573309414 23.795127654803473 42.4227984751898 16.396114296697313 37 16.957106704680143 24.430598712240126 40.01906012749463 18.593234455585097 38 20.36951020277413 22.896178364352757 40.464730755678 16.269580677195115 39 18.81426786686741 22.495355094980297 38.67604190024666 20.01433513790563 40 22.487747060896307 22.6034692635423 38.93191209917673 15.976871576384664 41 17.844844155428135 25.486914181375532 38.24718903161739 18.421052631578945 42 19.092161322356407 23.01630521831054 40.214866899445816 17.67666655988724 43 18.941201909216133 23.222122561424865 39.025611045263794 18.811064484095205 44 19.820130057340553 23.302607553576575 37.849569145017135 19.027693244065734 45 18.125940993689333 22.27952718070282 38.61557805042125 20.9789537751866 46 19.590687766281192 23.97571835858667 37.12920844411699 19.304385431015152 47 17.23860396578787 22.376829932408622 42.02477816574303 18.359787936060478 48 18.125140147996284 23.60212384277797 37.838757728160935 20.433978281064803 49 18.01902809366691 22.338789761988657 39.33513790562834 20.307044238716085 50 18.08910209180895 22.307957202806165 39.00999455424929 20.5929461511356 51 18.17559342665855 21.45665823109203 38.206345901271746 22.161402440977675 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 58.0 1 239.5 2 421.0 3 12587.5 4 24754.0 5 16545.0 6 8336.0 7 7762.0 8 7188.0 9 7126.5 10 7065.0 11 6744.5 12 6424.0 13 6077.0 14 5730.0 15 5255.0 16 4780.0 17 4427.5 18 4075.0 19 3719.5 20 3364.0 21 3134.0 22 2904.0 23 2784.5 24 2665.0 25 2677.0 26 2835.5 27 2982.0 28 3255.0 29 3528.0 30 3970.5 31 4413.0 32 4827.0 33 5241.0 34 5710.0 35 6179.0 36 6556.0 37 6933.0 38 7225.0 39 7517.0 40 8009.5 41 8502.0 42 8706.5 43 8911.0 44 9592.0 45 10273.0 46 16076.0 47 21879.0 48 18559.0 49 15239.0 50 14133.0 51 13027.0 52 11898.5 53 10770.0 54 9891.5 55 9013.0 56 8314.5 57 7616.0 58 6994.5 59 6373.0 60 5875.0 61 5377.0 62 4810.0 63 4243.0 64 3748.0 65 3253.0 66 2836.5 67 2420.0 68 2093.0 69 1766.0 70 1486.5 71 1207.0 72 1037.0 73 867.0 74 788.0 75 583.5 76 458.0 77 387.5 78 317.0 79 231.0 80 145.0 81 112.0 82 79.0 83 52.5 84 26.0 85 18.0 86 10.0 87 8.0 88 6.0 89 4.0 90 2.0 91 2.0 92 2.0 93 1.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 249736.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 56.10036978166164 #Duplication Level Percentage of deduplicated Percentage of total 1 78.82224252861866 44.21956952875323 2 10.063661846822392 11.29150301928672 3 4.715695597573293 7.936568004048468 4 2.6589659776713592 5.966758983368828 5 1.4751244865182644 4.137751458382919 6 0.7816220835487008 2.630957274995697 7 0.467940358328188 1.8376138996582219 8 0.2630851545572193 1.1807339563780486 9 0.17296839645902454 0.8733231901703099 >10 0.5001414996869333 4.917033848870383 >50 0.05188760601424555 2.0036790571533913 >100 0.021619835839268978 2.2009743315462194 >500 0.002161983583926898 0.773413647363688 >1k 0.002161983583926898 3.3414865632309887 >5k 0.0 0.0 >10k+ 7.206611946422993E-4 6.68863323679292 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 16544 6.624595572925009 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCTATCGCGATCGTATGCCG 3383 1.354630489797226 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCTATCGCGATCGTATGC 2543 1.0182752987154435 No Hit GAATCTGTCTCTTATACACATCTGACGCTATCGCGATCGTATGCCGTCTTC 2339 0.9365890380241535 No Hit GAACTGTCTCTTATACACATCTGACGCTATCGCGATCGTATGCCGTCTTCT 776 0.31072812890412277 No Hit GCTGTCTCTTATACACATCTGACGCTATCGCGATCGTATGCCGTCTTCTGC 579 0.2318448281385143 No Hit GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCTATCGCGAT 558 0.22343594836146974 No Hit GAATGATCTGTCTCTTATACACATCTGACGCTATCGCGATCGTATGCCGTC 427 0.1709805554665727 No Hit GAATGCTGTCTCTTATACACATCTGACGCTATCGCGATCGTATGCCGTCTT 331 0.1325399622000833 No Hit GAATGATACGGCGACTGTCTCTTATACACATCTGACGCTATCGCGATCGTA 311 0.12453150526956465 No Hit GAATGACTGTCTCTTATACACATCTGACGCTATCGCGATCGTATGCCGTCT 273 0.10931543710157927 No Hit GAATGATACCTGTCTCTTCTACACATCTGACGCTATCGCGATCGTATGCCG 272 0.10891501425505333 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTA 257 0.10290867155716436 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.041243553192170934 0.0 2 0.0 0.0 0.0 0.3840055098183682 0.0 3 0.0 0.0 0.0 0.5025306723900439 0.0 4 0.0 0.0 0.0 1.0110676874779767 0.0 5 0.0 0.0 0.0 2.3084377102219946 0.0 6 0.0 0.0 0.0 2.709260979594452 0.0 7 0.0 0.0 0.0 3.0492199762949674 0.0 8 0.0 0.0 0.0 3.4760707306916103 0.0 9 0.0 0.0 0.0 3.705112598904443 0.0 10 0.0 0.0 0.0 5.661578627030144 0.0 11 0.0 0.0 0.0 6.059999359323445 0.0 12 0.0 0.0 0.0 7.510731332286895 0.0 13 0.0 0.0 0.0 7.701332607233239 0.0 14 0.0 0.0 0.0 7.81825607841881 0.0 15 0.0 0.0 0.0 8.078530928660665 0.0 16 0.0 0.0 0.0 8.243104718582824 0.0 17 0.0 0.0 0.0 8.381651023480796 0.0 18 0.0 0.0 0.0 8.518996059839191 0.0 19 0.0 0.0 0.0 8.928228208988692 0.0 20 0.0 0.0 0.0 9.074782970817182 0.0 21 0.0 0.0 0.0 9.238155492199763 0.0 22 0.0 0.0 0.0 9.446375372393247 0.0 23 0.0 0.0 0.0 9.63417368741391 0.0 24 0.0 0.0 0.0 9.768315341000097 0.0 25 0.0 0.0 0.0 9.888442194957875 0.0 26 0.0 0.0 0.0 10.015376237306596 0.0 27 0.0 0.0 0.0 10.145113239580997 0.0 28 0.0 0.0 0.0 10.272447704776244 0.0 29 0.0 0.0 0.0 10.404987666976327 0.0 30 0.0 0.0 0.0 10.553144120190922 0.0 31 0.0 0.0 0.0 10.66446167152513 0.0 32 0.0 0.0 0.0 10.791796136720377 0.0 33 0.0 0.0 0.0 10.927939904539194 0.0 34 0.0 0.0 0.0 11.06208155812538 0.0 35 0.0 0.0 0.0 11.21864689111702 0.0 36 0.0 0.0 0.0 11.352788544703207 0.0 37 0.0 0.0 0.0 11.503347534996957 0.0 38 0.0 0.0 0.0 11.666720056379537 0.0 39 0.0 0.0 0.0 11.898965307364577 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ACATACG 30 2.1586548E-6 45.000004 17 CTTGTCG 20 7.0226716E-4 45.0 1 GGCACGT 20 7.0226716E-4 45.0 11 CATGATA 20 7.0226716E-4 45.0 2 TCGATCA 20 7.0226716E-4 45.0 17 CCCACGA 20 7.0226716E-4 45.0 39 AGGCACG 20 7.0226716E-4 45.0 10 CCCCACG 20 7.0226716E-4 45.0 38 CTCGATC 20 7.0226716E-4 45.0 16 CGGTAGG 25 3.8820097E-5 45.0 31 TGTACGG 20 7.0226716E-4 45.0 2 CGCCCAA 20 7.0226716E-4 45.0 38 ACGACGA 20 7.0226716E-4 45.0 34 CGTTTTT 7550 0.0 44.642384 1 CGACCAC 195 0.0 43.846153 12 TACGGCT 315 0.0 42.857143 7 GATACCT 450 0.0 42.0 5 GCGACCA 205 0.0 41.70732 11 TGATACC 460 0.0 41.086956 4 ATGATAC 1150 0.0 41.086956 3 >>END_MODULE