##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2933246.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 620512 Sequences flagged as poor quality 0 Sequence length 51 %GC 35 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 29.322893030271775 31.0 28.0 31.0 25.0 34.0 2 28.377101490382135 31.0 26.0 33.0 16.0 34.0 3 28.355126089422928 31.0 25.0 33.0 16.0 34.0 4 33.043983033366 35.0 32.0 37.0 28.0 37.0 5 34.20201220927234 35.0 33.0 37.0 30.0 37.0 6 33.568353230880305 35.0 33.0 37.0 28.0 37.0 7 33.68930496106441 35.0 33.0 37.0 29.0 37.0 8 33.477181746686604 35.0 33.0 37.0 28.0 37.0 9 34.73634353566087 37.0 34.0 39.0 28.0 39.0 10 34.78148367799495 37.0 33.0 39.0 28.0 39.0 11 35.17189353308236 37.0 34.0 39.0 29.0 39.0 12 35.287420710638955 37.0 34.0 39.0 30.0 39.0 13 35.380538974266415 37.0 34.0 39.0 30.0 39.0 14 36.15046606673199 38.0 34.0 40.0 29.0 41.0 15 36.390617747924296 38.0 34.0 40.0 30.0 41.0 16 36.41129422154608 38.0 34.0 40.0 30.0 41.0 17 35.64315919756588 38.0 33.0 40.0 27.0 41.0 18 35.39935085864576 38.0 34.0 39.0 27.0 40.0 19 34.689074506214226 37.0 33.0 38.0 27.0 40.0 20 33.758252862152546 35.0 32.0 37.0 27.0 40.0 21 34.218638801505854 35.0 33.0 38.0 27.0 40.0 22 34.698777783507815 35.0 33.0 39.0 29.0 40.0 23 34.97130917693775 35.0 33.0 39.0 30.0 40.0 24 34.46174771801351 35.0 33.0 38.0 27.0 40.0 25 33.42734548244031 35.0 33.0 38.0 24.0 40.0 26 33.4159984013202 35.0 32.0 38.0 24.0 40.0 27 34.252746119333715 35.0 33.0 38.0 26.0 40.0 28 33.86152080862256 35.0 33.0 39.0 24.0 40.0 29 33.86897594244753 35.0 33.0 39.0 24.0 40.0 30 33.20798791965345 35.0 33.0 39.0 21.0 40.0 31 33.26048488989738 35.0 33.0 39.0 21.0 40.0 32 32.49973892527461 35.0 31.0 38.0 17.0 40.0 33 31.701733407250785 35.0 30.0 39.0 12.0 40.0 34 31.07098331700273 35.0 27.0 39.0 8.0 40.0 35 30.438062438760248 35.0 24.0 39.0 7.0 40.0 36 29.96323681089165 35.0 22.0 40.0 7.0 40.0 37 29.75037871950905 35.0 21.0 40.0 7.0 40.0 38 29.603490343458304 35.0 21.0 39.0 7.0 40.0 39 29.06820980093858 35.0 18.0 39.0 7.0 40.0 40 28.83832705894487 35.0 18.0 39.0 7.0 40.0 41 28.39873523799701 35.0 18.0 39.0 7.0 40.0 42 28.55869024289619 35.0 18.0 39.0 7.0 40.0 43 28.573318485379815 35.0 18.0 39.0 7.0 40.0 44 28.617494907431283 35.0 17.0 39.0 7.0 40.0 45 28.758863648084162 35.0 18.0 39.0 7.0 40.0 46 28.458126514878035 35.0 17.0 39.0 7.0 40.0 47 28.38371699499768 35.0 17.0 39.0 7.0 40.0 48 28.24377449590016 35.0 17.0 39.0 7.0 40.0 49 28.417497163632614 35.0 17.0 39.0 7.0 40.0 50 28.375383554226186 35.0 17.0 39.0 7.0 40.0 51 27.426088455984736 33.0 15.0 38.0 7.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 2.0 8 6.0 9 24.0 10 33.0 11 34.0 12 67.0 13 71.0 14 125.0 15 186.0 16 322.0 17 699.0 18 1326.0 19 2644.0 20 4312.0 21 6470.0 22 8989.0 23 13159.0 24 19229.0 25 27180.0 26 35115.0 27 35170.0 28 30809.0 29 27090.0 30 27075.0 31 29499.0 32 34134.0 33 39405.0 34 46003.0 35 54856.0 36 59969.0 37 61558.0 38 47680.0 39 7271.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 27.10068459594657 2.2553955443246867 29.883708937135783 40.760210922592954 2 39.457093496983134 18.419949976793358 29.520460522923003 12.602496003300502 3 9.520524985818163 18.694400752926615 58.758895879531735 13.02617838172348 4 8.933912639884483 2.352734516012583 74.28139987623125 14.431952967871691 5 21.220540456913 2.7520821515135885 60.07490588417307 15.95247150740034 6 11.63474678974782 14.849994842968387 63.305947346707235 10.209311020576555 7 47.38812464545408 0.8850755505131246 49.20356093032851 2.523238873704296 8 46.443743231396006 11.169163529472435 39.030832602753854 3.356260636377701 9 43.84508277035738 2.311155948635965 37.40685111649734 16.436910164509307 10 26.346791037079058 17.81561033469135 43.571921252127275 12.265677376102316 11 20.010088443092155 15.446115465937806 51.58562606363777 12.958170027332267 12 15.614041307823218 13.818749677685524 53.027177556598424 17.540031457892837 13 14.97424707338456 14.892862668248155 59.484586921767836 10.648303336599453 14 13.509650095405085 21.147052756433396 49.98871899334743 15.354578154814089 15 10.36192692486205 15.403731112371718 60.194968026404005 14.039373936362228 16 11.949003403640864 18.234941467691197 48.97810195451498 20.837953174152958 17 12.575099272858543 17.998684956938785 54.41731989067093 15.008895879531742 18 12.576549687999588 17.059460574493322 53.05699164560879 17.306998091898304 19 12.30628900005157 19.076826878448767 49.90830153163839 18.708582589861276 20 14.615349904594915 18.61285519055232 55.365085606724776 11.406709298127996 21 14.481267082667218 22.341711360940643 51.368708421432615 11.808313134959517 22 12.724330875148265 14.394081016966634 53.73433551647672 19.147252591408385 23 13.217794337579289 21.36928858748904 52.63008612242793 12.782830952503737 24 15.493012222164923 16.970501779175905 50.08847532360373 17.44801067505544 25 11.861172708988706 26.096836161105667 47.882716208550356 14.159274921355266 26 12.712244082306224 16.100897323500593 52.38609406425662 18.80076452993657 27 16.161975916662367 18.054123046774276 48.73024212263421 17.053658913929144 28 10.764981176834613 18.197714145737713 53.04329328038781 17.994011397039863 29 15.077065391160849 15.337334330359445 49.299288329637456 20.286311948842247 30 12.317086534990459 19.966253674385023 53.32145067299262 14.395209117631891 31 14.705436800577587 16.718290701872 46.69498736527255 21.88128513227786 32 16.322488525604662 24.29219741117013 44.451356299314114 14.933957763911094 33 13.283224176164198 18.152751276365326 43.21286292609974 25.35116162137074 34 15.667223196328193 20.690655458717963 44.61573668196586 19.026384662987983 35 13.139633077200763 25.42207080604404 42.7828954153989 18.6554007013563 36 14.710271517714405 20.94254422154608 37.331913000876696 27.01527125986282 37 14.675622711567222 25.641728121293383 43.51148728791707 16.17116187922232 38 16.581629364138 22.593761281006653 35.77561755453561 25.048991800319737 39 18.613983291217576 24.648193749677684 39.09497318343561 17.642849775669127 40 17.193221081945232 25.4547857253365 38.37862926099737 18.9733639317209 41 17.054625857356505 24.576156464339128 37.416681708008866 20.952535970295497 42 16.75148909287814 25.770492754370583 40.08770176886184 17.390316383889434 43 19.498414212779124 21.487416842865247 34.60207054819246 24.412098396163167 44 19.976245423134444 22.194413645505648 36.33547779897891 21.493863132381 45 16.63481125264298 22.00344231860141 36.17883296374607 25.182913465009545 46 22.206016966634007 24.93537594760456 33.651242844618636 19.2073642411428 47 15.57375199834975 21.187019751431077 43.38787968645248 19.851348563766695 48 18.95821515135888 23.82145711928214 34.32568588520448 22.894641844154503 49 16.58034010623485 22.165244185446856 40.32637563818266 20.92804007013563 50 18.373053220566245 20.348679799907174 37.8047483368573 23.47351864266928 51 18.23623072559435 20.96591202104069 35.22752178845857 25.570335464906403 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 27.0 1 787.5 2 1548.0 3 20623.5 4 39699.0 5 30179.5 6 20660.0 7 19884.0 8 19108.0 9 18882.0 10 18656.0 11 18337.5 12 18019.0 13 17212.5 14 16406.0 15 15653.0 16 14900.0 17 14034.5 18 13169.0 19 12184.5 20 11200.0 21 10305.5 22 9411.0 23 8903.5 24 8396.0 25 8016.5 26 7769.5 27 7902.0 28 8233.5 29 8565.0 30 9356.0 31 10147.0 32 10859.0 33 11571.0 34 12712.0 35 13853.0 36 14638.0 37 15423.0 38 16297.5 39 17172.0 40 18347.5 41 19523.0 42 20568.0 43 21613.0 44 23815.5 45 26018.0 46 64454.0 47 102890.0 48 70686.5 49 38483.0 50 34948.0 51 31413.0 52 27421.0 53 23429.0 54 21451.5 55 19474.0 56 17786.0 57 16098.0 58 14232.0 59 12366.0 60 10621.5 61 8877.0 62 7483.0 63 6089.0 64 5069.0 65 4049.0 66 3320.0 67 2591.0 68 2032.5 69 1474.0 70 1201.0 71 928.0 72 766.0 73 604.0 74 541.5 75 374.5 76 270.0 77 225.5 78 181.0 79 141.0 80 101.0 81 79.5 82 58.0 83 39.5 84 21.0 85 14.5 86 8.0 87 5.5 88 3.0 89 3.0 90 3.0 91 1.5 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 620512.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 50.76835831791748 #Duplication Level Percentage of deduplicated Percentage of total 1 81.49091321980131 41.37159881997193 2 7.778183285934372 7.89771192245506 3 3.710209883340289 5.650837943762959 4 2.28484300386253 4.6399091328111925 5 1.4404234994224847 3.6563968174114656 6 0.9741305683923474 2.9673005846747587 7 0.6450626543884284 2.292414038284909 8 0.4337977317445996 1.7618558946167748 9 0.3108113501283908 1.420144379333447 >10 0.8488711084146691 6.769539593848034 >50 0.04862182144603398 1.7377234285332481 >100 0.028979892275575153 3.0322700649808154 >500 0.0012879952122477794 0.40230829855613615 >1k 0.0025759904244955587 4.032237501903964 >5k 0.0 0.0 >10k+ 0.0012879952122477794 12.36775157885536 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 21128 3.404930122221649 No Hit GAATCTGTCTCTTATACACATCTGACGCCTCACTACTCGTATGCCGTCTTC 20827 3.356421793615595 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCCTCACTACTCGTATGCCG 19171 3.089545407663349 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCCTCACTACTCGTATGC 14530 2.341614666597906 No Hit GAACTGTCTCTTATACACATCTGACGCCTCACTACTCGTATGCCGTCTTCT 4844 0.780645660357898 No Hit GAATGATCTGTCTCTTATACACATCTGACGCCTCACTACTCGTATGCCGTC 3799 0.6122363467588057 No Hit GCTGTCTCTTATACACATCTGACGCCTCACTACTCGTATGCCGTCTTCTGC 3576 0.576298282708473 TruSeq Adapter, Index 23 (95% over 22bp) GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCCTCACTACT 3177 0.5119965447888196 No Hit GAATGACTGTCTCTTATACACATCTGACGCCTCACTACTCGTATGCCGTCT 3060 0.49314114795523695 No Hit GAATGATACGGCGACTGTCTCTTATACACATCTGACGCCTCACTACTCGTA 2644 0.4260997369913877 No Hit GAATGCTGTCTCTTATACACATCTGACGCCTCACTACTCGTATGCCGTCTT 2276 0.3667938734464442 No Hit GAATGATACGGCGACCTGTCTCTTATACACATCTGACGCCTCACTACTCGT 1290 0.2078928368830901 No Hit GAATGATACGGCGCTGTCTCTTATACACATCTGACGCCTCACTACTCGTAT 674 0.10861997834046722 No Hit CTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 626 0.10088443092156155 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 3.2231447578773655E-4 0.0 0.0 0.06752488267753082 0.0 2 3.2231447578773655E-4 0.0 0.0 0.7134430921561549 0.0 3 3.2231447578773655E-4 0.0 0.0 0.8386622659996906 0.0 4 3.2231447578773655E-4 0.0 0.0 1.7745023464493836 0.0 5 3.2231447578773655E-4 0.0 0.0 5.695296787169306 0.0 6 3.2231447578773655E-4 0.0 0.0 6.223731370223299 0.0 7 3.2231447578773655E-4 0.0 0.0 6.909294260223815 0.0 8 3.2231447578773655E-4 0.0 0.0 7.736353205095147 0.0 9 3.2231447578773655E-4 0.0 0.0 7.902022845650044 0.0 10 3.2231447578773655E-4 0.0 0.0 11.582531844670207 0.0 11 3.2231447578773655E-4 0.0 0.0 11.764156051776597 0.0 12 3.2231447578773655E-4 0.0 0.0 14.674978082615647 0.0 13 3.2231447578773655E-4 0.0 0.0 14.89882548605023 0.0 14 3.2231447578773655E-4 0.0 0.0 15.078515806301892 0.0 15 3.2231447578773655E-4 0.0 0.0 15.649818214635657 0.0 16 3.2231447578773655E-4 0.0 0.0 15.96745913052447 0.0 17 3.2231447578773655E-4 0.0 0.0 16.13119488422464 0.0 18 3.2231447578773655E-4 0.0 0.0 16.243199164560878 0.0 19 3.2231447578773655E-4 0.0 0.0 16.995964622763136 0.0 20 3.2231447578773655E-4 0.0 0.0 17.150353256665465 0.0 21 3.2231447578773655E-4 0.0 0.0 17.252849259965963 0.0 22 3.2231447578773655E-4 0.0 0.0 17.476696663400546 0.0 23 3.2231447578773655E-4 0.0 0.0 17.578709194987365 0.0 24 3.2231447578773655E-4 0.0 0.0 17.67846552524367 0.0 25 3.2231447578773655E-4 0.0 0.0 17.76001108761797 0.0 26 3.2231447578773655E-4 0.0 0.0 17.874916198236296 0.0 27 3.2231447578773655E-4 0.0 0.0 18.050255273064824 0.0 28 3.2231447578773655E-4 0.0 0.0 18.138247124954876 0.0 29 3.2231447578773655E-4 0.0 0.0 18.23961502759012 0.0 30 4.834717136816049E-4 0.0 0.0 18.351619307926356 0.0 31 4.834717136816049E-4 0.0 0.0 18.459433500077356 1.6115723789386828E-4 32 4.834717136816049E-4 0.0 0.0 18.575305554123048 1.6115723789386828E-4 33 4.834717136816049E-4 0.0 0.0 18.68876024960033 1.6115723789386828E-4 34 4.834717136816049E-4 0.0 0.0 18.859909236243617 1.6115723789386828E-4 35 4.834717136816049E-4 0.0 0.0 18.986739982466094 1.6115723789386828E-4 36 4.834717136816049E-4 0.0 0.0 19.104707080604403 1.6115723789386828E-4 37 4.834717136816049E-4 0.0 0.0 19.239756845959466 1.6115723789386828E-4 38 4.834717136816049E-4 0.0 0.0 19.38818266205972 1.6115723789386828E-4 39 4.834717136816049E-4 0.0 0.0 19.573513485637665 1.6115723789386828E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CACCGGT 130 0.0 45.000004 16 CGACGAA 25 3.8887243E-5 45.0 19 ATTCGGC 25 3.8887243E-5 45.0 28 TACGCCA 20 7.030774E-4 45.0 28 GAGCGAC 25 3.8887243E-5 45.0 18 GCGATAG 20 7.030774E-4 45.0 9 GACGAAT 25 3.8887243E-5 45.0 20 ACCGGTG 105 0.0 44.999996 17 GCGATCG 30 2.1638807E-6 44.999996 9 CGTTTTT 18345 0.0 44.582993 1 CGATGAA 560 0.0 42.589283 19 GACACGA 90 0.0 42.5 25 TGATACC 2235 0.0 42.18121 4 GATACCT 2235 0.0 42.18121 5 ACGGCTG 1885 0.0 42.015915 8 ATACCTG 2265 0.0 41.821194 6 CCGATGA 565 0.0 41.81416 18 CGGCTGT 1940 0.0 41.52062 9 TACGGCT 1935 0.0 40.930237 7 CGCTTTT 530 0.0 40.75472 1 >>END_MODULE