##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2933243.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 295143 Sequences flagged as poor quality 0 Sequence length 51 %GC 36 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 28.537929071670344 31.0 28.0 31.0 16.0 33.0 2 28.7102658711201 31.0 30.0 33.0 16.0 34.0 3 28.88011235231735 31.0 30.0 33.0 16.0 34.0 4 32.01978363030802 35.0 30.0 37.0 19.0 37.0 5 33.6532697709246 35.0 33.0 37.0 28.0 37.0 6 32.58633611503576 35.0 33.0 37.0 17.0 37.0 7 32.16417465432011 35.0 32.0 35.0 25.0 37.0 8 32.806720809912484 35.0 32.0 36.0 27.0 37.0 9 33.06247141216292 35.0 31.0 37.0 25.0 39.0 10 31.524715138085607 35.0 27.0 39.0 15.0 39.0 11 32.408845881487956 35.0 28.0 39.0 17.0 39.0 12 33.21704732959955 35.0 31.0 39.0 23.0 39.0 13 33.45657189904555 35.0 32.0 39.0 25.0 39.0 14 33.6570374360903 37.0 32.0 40.0 20.0 41.0 15 34.214482471208875 37.0 32.0 40.0 25.0 41.0 16 34.409245687683594 37.0 32.0 40.0 25.0 41.0 17 32.32561165265651 35.0 27.0 40.0 18.0 41.0 18 33.03273328522106 36.0 30.0 39.0 23.0 39.0 19 32.76735006420616 36.0 30.0 37.0 21.0 39.0 20 32.270357081143715 34.0 30.0 36.0 23.0 39.0 21 32.716530630914505 35.0 31.0 37.0 24.0 39.0 22 32.83236939381927 34.0 30.0 37.0 25.0 39.0 23 33.823783725177286 35.0 32.0 38.0 27.0 40.0 24 32.1496494919412 35.0 31.0 37.0 21.0 39.0 25 31.355078724550474 34.0 29.0 37.0 18.0 39.0 26 30.454522045245863 33.0 25.0 37.0 18.0 39.0 27 32.20340309612629 34.0 30.0 37.0 22.0 39.0 28 32.262218653330756 35.0 31.0 37.0 21.0 39.0 29 32.40203562340967 35.0 31.0 38.0 21.0 40.0 30 31.402547239812566 34.0 29.0 37.0 18.0 40.0 31 31.746184053153893 35.0 30.0 37.0 20.0 39.0 32 31.554571851610913 35.0 30.0 37.0 18.0 40.0 33 31.33580332245725 35.0 30.0 38.0 15.0 40.0 34 30.40894075075472 35.0 27.0 38.0 10.0 40.0 35 29.840856805006386 35.0 25.0 38.0 8.0 40.0 36 29.216583147830036 34.0 23.0 38.0 7.0 40.0 37 29.326350277662016 35.0 23.0 38.0 7.0 40.0 38 29.170585106202758 34.0 23.0 38.0 7.0 40.0 39 28.74551996828656 34.0 22.0 37.0 7.0 40.0 40 28.490701117763255 33.0 21.0 37.0 7.0 40.0 41 27.985247829018476 33.0 20.0 37.0 7.0 40.0 42 28.42134490738388 33.0 21.0 37.0 7.0 40.0 43 28.29101147579309 34.0 20.0 37.0 7.0 40.0 44 28.275818840358742 34.0 19.0 38.0 7.0 40.0 45 28.502176910853382 34.0 20.0 38.0 7.0 40.0 46 28.184676580505045 34.0 20.0 38.0 7.0 40.0 47 28.18483582534568 34.0 20.0 38.0 7.0 40.0 48 28.00605130394419 34.0 20.0 37.0 7.0 40.0 49 27.86479435392335 33.0 19.0 37.0 7.0 39.0 50 27.96617910639927 34.0 20.0 37.0 7.0 40.0 51 26.406538525392776 31.0 18.0 35.0 7.0 38.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 5.0 9 10.0 10 14.0 11 22.0 12 35.0 13 46.0 14 75.0 15 144.0 16 343.0 17 645.0 18 1109.0 19 1782.0 20 2728.0 21 3678.0 22 5173.0 23 7086.0 24 9681.0 25 13149.0 26 16785.0 27 17853.0 28 17559.0 29 17453.0 30 18974.0 31 21132.0 32 23468.0 33 25849.0 34 28016.0 35 29310.0 36 20437.0 37 10444.0 38 2095.0 39 42.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 22.148924419688086 2.475071406064179 32.72752530129463 42.64847887295311 2 42.771470100934124 12.460400551597022 32.34127185804847 12.426857489420383 3 11.856625432417506 12.361804277926293 62.94406440267938 12.837505886976821 4 10.739878635102308 2.662099389109686 71.42876503931991 15.169256936468084 5 18.743117742924618 3.1340739912516984 62.518169158679015 15.604639107144672 6 13.077389604361276 11.35619005024683 64.4057287484372 11.160691596954697 7 49.48618127483965 1.1543556852102201 46.7471700158906 2.612293024059524 8 50.49924951633615 8.66698515634794 37.35477378762159 3.478991539694318 9 47.28385901071684 2.3510637216535715 37.31852017496603 13.046557092663559 10 28.840934733332656 15.478259691065011 42.9025929803519 12.778212595250437 11 21.894471493479433 15.45352591794486 49.453654669092614 13.198347919483098 12 16.879275469856985 13.80991587128951 52.22180434569006 17.08900431316345 13 15.68832735318134 14.639005499029285 57.78656447891362 11.886102668875766 14 13.942732844756609 17.84999136012035 51.44252108300045 16.7647547121226 15 11.129520266447113 14.482132390061766 59.50539230135901 14.882955042132117 16 12.638280426776172 13.985424014799605 51.8548635746062 21.52143198381801 17 13.065530946015999 15.351202637365615 54.653168125281645 16.930098291336744 18 13.428744710191332 14.463836174329053 53.82712786683066 18.28029124864896 19 14.368966907566842 16.97888819995731 50.56633564068943 18.085809251786422 20 16.78169565261585 15.42337104386687 55.13022500957163 12.664708293945647 21 16.60517105267616 19.180194007650528 50.26783626919832 13.94679867047499 22 14.064368797498162 14.585133308260742 52.99600532623169 18.354492568009405 23 14.314078260368705 19.837163679978858 50.779791490904415 15.06896656874803 24 15.112335376410757 15.470128039628248 50.76183409398156 18.655702489979433 25 12.710110014467563 20.80787957024222 49.474322616494376 17.007687798795835 26 13.601203484412641 16.552654137147076 52.32073943817065 17.525402940269633 27 14.893458425237935 17.794763894112346 49.77485490084467 17.536922779805046 28 11.934214939876602 17.645005980151996 54.099877008772026 16.320902071199384 29 15.956333031784592 16.069159695469654 50.73506740800222 17.23943986474353 30 15.059818460881674 19.54001958372721 50.49552250942764 14.904639445963483 31 15.851976838346157 16.412721968672813 47.80326824623996 19.93203294674107 32 16.817610446461543 20.79432681784762 47.466821168043964 14.92124156764687 33 15.070660662797355 20.059767638060194 44.229068620973564 20.640503078168887 34 16.359866234333865 22.596504067519813 42.55428724381063 18.489342454335695 35 16.878597832237254 21.59258393388967 41.454481386988675 20.074336846884393 36 16.397475122228887 24.400036592431466 38.84184954411929 20.360638741220356 37 17.78561578624599 21.740308934990836 43.61038547415998 16.863689804603194 38 16.86673917389198 23.98972701368489 38.827957972914824 20.315575839508305 39 16.968723635661355 22.413541910192684 41.15394910263838 19.463785351507575 40 17.350572434379266 23.16605848690296 39.68788011235232 19.795488966365458 41 16.331744273115067 24.52777128375059 37.99412488183694 21.146359561297405 42 16.272450981388683 22.0828547517644 41.06721148731293 20.57748277953399 43 17.93808425068526 24.385806202417136 37.98802614325937 19.688083403638238 44 19.65013569693335 21.827385369126155 38.7205524101876 19.80192652375289 45 16.465238884201895 21.62849872773537 38.184541052981096 23.72172133508164 46 19.32656373351223 23.992098745353946 37.44761014152462 19.233727379609206 47 15.719498683688924 22.22312573904853 42.99746224711411 19.059913330148436 48 18.46630277526487 22.32172201271926 36.81130841659805 22.400666795417816 49 16.21248005204257 20.357589371931574 41.22882805961856 22.2011025164073 50 17.696167620441617 21.101974297205082 39.2857021850425 21.916155897310794 51 17.71920729951244 20.595440176456837 37.77694202471344 23.90841049931728 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 95.0 1 322.0 2 549.0 3 15113.5 4 29678.0 5 20148.5 6 10619.0 7 10193.0 8 9767.0 9 9626.0 10 9485.0 11 8854.0 12 8223.0 13 7550.5 14 6878.0 15 6271.5 16 5665.0 17 5251.0 18 4837.0 19 4398.5 20 3960.0 21 3641.0 22 3322.0 23 3103.5 24 2885.0 25 2841.0 26 2868.0 27 2939.0 28 2922.0 29 2905.0 30 3318.5 31 3732.0 32 3961.5 33 4191.0 34 4921.5 35 5652.0 36 5649.5 37 5647.0 38 6205.0 39 6763.0 40 7323.0 41 7883.0 42 8511.0 43 9139.0 44 10516.0 45 11893.0 46 21616.0 47 31339.0 48 26043.5 49 20748.0 50 19138.0 51 17528.0 52 15113.5 53 12699.0 54 11492.5 55 10286.0 56 9816.0 57 9346.0 58 8853.0 59 8360.0 60 7532.0 61 6704.0 62 5970.5 63 5237.0 64 4627.0 65 4017.0 66 3443.5 67 2870.0 68 2455.5 69 2041.0 70 1727.5 71 1414.0 72 1278.5 73 1143.0 74 982.0 75 663.0 76 505.0 77 373.5 78 242.0 79 224.5 80 207.0 81 146.5 82 86.0 83 59.5 84 33.0 85 21.0 86 9.0 87 6.0 88 3.0 89 2.0 90 1.0 91 0.5 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 295143.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 47.11630797498363 #Duplication Level Percentage of deduplicated Percentage of total 1 81.72072787539696 38.50378982517032 2 6.638653195456098 6.255776569924374 3 2.9327237805766537 4.145373505536238 4 1.900837566697696 3.5824179281178856 5 1.3816557318218339 3.254925848795946 6 1.046217974338608 2.9576356972740827 7 0.8580815064154179 2.8300742766734706 8 0.7228646619033489 2.724697122757648 9 0.5464566629365698 2.317231838331112 >10 2.163974211652119 15.228791712370981 >50 0.046443283466964566 1.4712468298589312 >100 0.03338110999188078 2.9315524794818675 >500 0.0029027052166852854 0.909485607117071 >1k 0.0029027052166852854 2.3492765437975174 >5k 0.0014513526083426427 3.6776042068237653 >10k+ 7.256763041713213E-4 6.8601200079687645 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 20064 6.798060601132333 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCAGCTACCATCGTATGCCG 5740 1.9448199686253782 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCAGCTACCATCGTATGC 5016 1.6995151502830832 No Hit GAATCTGTCTCTTATACACATCTGACGCAGCTACCATCGTATGCCGTCTTC 3221 1.091335386575321 No Hit GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCAGCTACCAT 1329 0.45029019831064937 No Hit GCTGTCTCTTATACACATCTGACGCAGCTACCATCGTATGCCGTCTTCTGC 1261 0.42725051923982615 No Hit GAACTGTCTCTTATACACATCTGACGCAGCTACCATCGTATGCCGTCTTCT 1060 0.35914793845695137 No Hit GAATGATCTGTCTCTTATACACATCTGACGCAGCTACCATCGTATGCCGTC 841 0.28494661909650576 No Hit GAATGATACGGCGACTGTCTCTTATACACATCTGACGCAGCTACCATCGTA 782 0.2649563093144679 No Hit GAATGATACCTGTCTCTTCTACACATCTGACGCAGCTACCATCGTATGCCG 524 0.17754105636928538 No Hit GAATGACTGTCTCTTATACACATCTGACGCAGCTACCATCGTATGCCGTCT 513 0.17381404946076986 No Hit GAATCTTTCTCTTATACACATCTGACGCAGCTACCATCGTATGCCGTCTTC 389 0.13180051703750387 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTA 388 0.1314616982276388 No Hit GAATGATACGGCGACCTGTCTCTTATACACATCTGACGCAGCTACCATCGT 355 0.1202806775020922 No Hit CTGTCTCTTATACACATCTGACGCAGCTACCATCGTATGCCGTCTTCTGCT 334 0.11316548249492618 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAAA 321 0.10876083796668055 No Hit GAATGATACGGCTGCCTCCTATACACATCTGACGCAGCTACCATCGTATGC 305 0.10333973700883978 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.13756043680520968 0.0 2 0.0 0.0 0.0 0.7948689279434037 0.0 3 0.0 0.0 0.0 0.9642783328759279 0.0 4 0.0 0.0 0.0 1.5836391173092366 0.0 5 0.0 0.0 0.0 3.0554680273630073 0.0 6 0.0 0.0 0.0 3.3166973297689593 0.0 7 0.0 0.0 0.0 3.66974652964834 0.0 8 0.0 0.0 0.0 4.1983038730378155 0.0 9 0.0 0.0 0.0 4.339252497941676 0.0 10 0.0 0.0 0.0 6.986782678227164 0.0 11 0.0 0.0 0.0 7.502464906841769 0.0 12 0.0 0.0 0.0 9.900963261876447 0.0 13 0.0 0.0 0.0 10.164564295951454 0.0 14 0.0 0.0 0.0 10.317710398010457 0.0 15 0.0 0.0 0.0 10.773082878469081 0.0 16 0.0 0.0 0.0 11.067177605431944 0.0 17 0.0 0.0 0.0 11.334166827605602 0.0 18 0.0 0.0 0.0 11.598106680490474 0.0 19 0.0 0.0 0.0 12.356721995778317 0.0 20 0.0 0.0 0.0 12.632859325818332 0.0 21 0.0 0.0 0.0 12.924243502302273 0.0 22 0.0 0.0 0.0 13.364369136316972 0.0 23 0.0 0.0 0.0 13.642200560406312 0.0 24 0.0 0.0 0.0 13.857689323480482 0.0 25 0.0 0.0 0.0 14.05081604510356 0.0 26 0.0 0.0 0.0 14.241232216247717 0.0 27 0.0 0.0 0.0 14.424533192384708 0.0 28 0.0 0.0 0.0 14.601057792324399 0.0 29 0.0 0.0 0.0 14.78639168132058 0.0 30 0.0 0.0 0.0 14.99442643057772 0.0 31 0.0 0.0 0.0 15.187891971010663 0.0 32 0.0 0.0 0.0 15.390844438119826 0.0 33 0.0 0.0 0.0 15.579905334024524 0.0 34 0.0 0.0 0.0 15.776081424936386 0.0 35 0.0 0.0 0.0 15.988520818721772 0.0 36 0.0 0.0 0.0 16.19045682940134 0.0 37 0.0 0.0 0.0 16.392731658890774 0.0 38 0.0 0.0 0.0 16.583486648844797 0.0 39 0.0 0.0 0.0 16.821337453370063 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TTGCTCG 30 2.159999E-6 45.000004 1 ACCGCCT 30 2.159999E-6 45.000004 14 GACCGCC 35 1.2078272E-7 45.0 13 GCGTTGG 20 7.024758E-4 45.0 2 GCCGATT 20 7.024758E-4 45.0 9 CGGGATC 55 1.8189894E-12 45.0 6 CGTGTCT 20 7.024758E-4 45.0 20 TTCGGGT 35 1.2078272E-7 45.0 4 GTCTTAT 70 0.0 45.0 23 CGCCACT 20 7.024758E-4 45.0 20 CGTTTTT 9675 0.0 44.255814 1 TACGGCT 785 0.0 43.28026 7 ACGGCTG 795 0.0 42.73585 8 CCGATGA 95 0.0 42.63158 18 CGATGAA 90 0.0 42.5 19 ACCGGTG 70 0.0 41.785713 17 CCTATAC 70 0.0 41.785713 18 CGGCTGT 755 0.0 41.721855 9 ATGATAC 2320 0.0 41.702587 3 GATACGG 1610 0.0 41.645966 5 >>END_MODULE