##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2933242.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 604801 Sequences flagged as poor quality 0 Sequence length 51 %GC 38 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 29.524704820263192 31.0 28.0 33.0 25.0 34.0 2 28.820445072015424 31.0 28.0 33.0 16.0 34.0 3 28.792316811645485 31.0 28.0 34.0 16.0 34.0 4 33.18577350235863 35.0 32.0 37.0 28.0 37.0 5 34.24306176742433 35.0 33.0 37.0 30.0 37.0 6 33.72919852976433 35.0 33.0 37.0 28.0 37.0 7 33.59370602892522 35.0 32.0 37.0 29.0 37.0 8 33.55144254060426 35.0 33.0 37.0 28.0 37.0 9 34.71756660455257 37.0 34.0 39.0 28.0 39.0 10 34.384743080781945 37.0 32.0 39.0 27.0 39.0 11 34.59000067790893 37.0 33.0 39.0 27.0 39.0 12 34.708914171768896 37.0 33.0 39.0 27.0 39.0 13 34.790645187425284 37.0 34.0 39.0 27.0 39.0 14 35.677150004712296 38.0 34.0 40.0 27.0 41.0 15 35.940560614152425 38.0 34.0 40.0 27.0 41.0 16 35.907949887648996 38.0 34.0 40.0 27.0 41.0 17 35.262836867002534 37.0 33.0 40.0 27.0 41.0 18 35.05953693859633 37.0 33.0 39.0 27.0 40.0 19 34.355971633644785 37.0 33.0 38.0 27.0 40.0 20 33.70325445890467 35.0 32.0 38.0 27.0 40.0 21 34.135067567679286 35.0 33.0 38.0 27.0 40.0 22 34.69403985773833 35.0 33.0 39.0 29.0 40.0 23 35.06644830283019 35.0 33.0 39.0 30.0 40.0 24 34.56313564296355 35.0 33.0 39.0 27.0 40.0 25 33.58479566006009 35.0 33.0 38.0 24.0 40.0 26 33.56417896134431 35.0 32.0 38.0 24.0 40.0 27 34.25071883148341 35.0 33.0 38.0 27.0 40.0 28 34.06716424079987 35.0 33.0 39.0 25.0 40.0 29 34.1399997685189 35.0 33.0 39.0 25.0 40.0 30 33.379751356231225 35.0 33.0 39.0 22.0 40.0 31 33.25746981238457 35.0 33.0 38.0 22.0 40.0 32 32.66607363413751 35.0 32.0 38.0 18.0 40.0 33 32.24425058821001 35.0 31.0 39.0 15.0 40.0 34 31.65988812849185 35.0 30.0 39.0 10.0 40.0 35 31.20734258045208 35.0 29.0 39.0 8.0 40.0 36 30.605195758604896 35.0 26.0 39.0 7.0 40.0 37 30.512102327873134 35.0 25.0 39.0 7.0 40.0 38 30.232370647535305 35.0 24.0 39.0 7.0 40.0 39 29.899902612594886 35.0 23.0 39.0 7.0 40.0 40 29.631022435478776 35.0 23.0 39.0 7.0 40.0 41 29.163589345917085 35.0 21.0 38.0 7.0 40.0 42 29.32968530144626 35.0 22.0 39.0 7.0 40.0 43 29.242767455741642 35.0 21.0 39.0 7.0 40.0 44 29.332725971021873 35.0 21.0 39.0 7.0 40.0 45 29.451343499762732 35.0 22.0 39.0 7.0 40.0 46 29.295723717388032 35.0 22.0 39.0 7.0 40.0 47 29.26036497955526 35.0 22.0 38.0 7.0 40.0 48 29.1186125684316 35.0 22.0 38.0 7.0 40.0 49 29.328243504888384 35.0 22.0 38.0 7.0 40.0 50 29.276927452170217 35.0 22.0 38.0 7.0 40.0 51 28.088730012020484 33.0 20.0 37.0 7.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 2.0 8 13.0 9 29.0 10 37.0 11 34.0 12 35.0 13 65.0 14 99.0 15 165.0 16 309.0 17 590.0 18 1234.0 19 2183.0 20 3472.0 21 5212.0 22 7429.0 23 10728.0 24 15572.0 25 22395.0 26 29066.0 27 31230.0 28 29967.0 29 28112.0 30 29090.0 31 32543.0 32 37908.0 33 43816.0 34 48855.0 35 56626.0 36 59488.0 37 59180.0 38 43236.0 39 6081.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 26.17720539483235 2.377310884075919 32.95480662234355 38.49067709874818 2 37.44471321972021 16.135224644139146 32.23655384167685 14.183508294463799 3 12.297764057929799 16.249642444374267 57.20377446465862 14.248819033037313 4 11.365721948211064 2.7809147140960415 69.35636680494906 16.49699653274383 5 20.944079126853296 3.270993268860336 58.39061112663504 17.394316477651326 6 13.802721887033917 13.77097590777793 61.40763656144749 11.018665643740668 7 51.94998024143479 1.3578019877612635 43.76811546277205 2.924102308031898 8 51.05861266763778 10.240723808327036 35.286482661238985 3.4141808627961923 9 48.11417309164502 2.668481037564422 34.31244326646286 14.904902604327704 10 32.38552846308124 14.032549549355904 40.81821954659466 12.763702440968187 11 26.40885183721588 14.635061780651817 45.21619507904253 13.739891303089777 12 19.894643031344195 13.360758332079477 49.32746473633476 17.417133900241566 13 18.727647606402765 13.740883364941524 55.22328832128254 12.308180707373168 14 15.812308511394658 19.140345336730594 49.10524288154286 15.942103270331895 15 13.208476837835917 13.852655666905312 57.67897209164667 15.259895403612097 16 16.20169278820637 16.262208561163092 46.8192016878279 20.716896962802643 17 16.667465827602797 16.367367117448552 50.924022943083756 16.041144111864895 18 16.743358559261644 15.633076003511897 49.671710198891866 17.951855238334595 19 16.380759952447168 17.924242850127563 46.63798505624164 19.05701214118363 20 17.61124733590057 18.821893482318977 51.014300571592976 12.552558610187484 21 17.439124604622016 21.383562527178363 48.287287884775324 12.8900249834243 22 15.719881415539987 14.032714892997863 51.237018457310754 19.010385234151396 23 15.872824284351381 19.897288529615526 50.25123966395558 13.978647522077509 24 17.90076405296949 16.737075500867228 47.021086274658934 18.341074171504346 25 15.603644835243328 23.60263954590022 44.80134788136924 15.992367737487207 26 15.324875454901695 14.691278618917627 49.614170611490394 20.369675314690287 27 18.116537505725024 16.76121567259313 46.412125641326654 18.71012118035519 28 13.048754879704234 18.15588929251109 50.20279397686181 18.592561850922866 29 18.717561644243315 16.04808854482714 48.38318719711111 16.85116261381843 30 19.63422679525993 19.36471665886796 47.270093799448084 13.73096274642403 31 19.59900859952282 18.27014174910425 44.16692432717538 17.963925324197547 32 24.691758115479306 19.427877930096017 42.12112744522579 13.759236509198894 33 22.183164379688524 16.945739177018556 39.78134956787439 21.089746875418527 34 19.7226856437076 19.823710608944097 42.72479708201541 17.728806665332893 35 20.291633115685986 24.081144045727438 38.27787983154789 17.34934300703868 36 19.087766058587867 24.131904543808623 40.22331312282883 16.55701627477468 37 23.46358554301332 22.614049910631763 37.58409790989102 16.338266636463892 38 23.39794411715589 24.771123063619275 34.0242492985296 17.806683520695238 39 23.638353772563207 20.99136740845336 34.76052453616975 20.609754282813686 40 23.477805096221733 23.33147597308867 36.23985410077034 16.95086482991926 41 19.112567604881605 23.48673365288748 36.16131587084016 21.239382871390756 42 18.893817966570822 24.277241605089937 38.87642381543681 17.952516612902425 43 21.222517819911012 20.27708287519366 37.84699430060466 20.65340500429067 44 22.596854171868102 20.482935709431697 35.13816941440243 21.782040704297778 45 18.671761455420874 21.28848993305236 35.31128420753273 24.728464403994042 46 23.653730731265327 22.387363777506984 34.23969206400122 19.719213427226475 47 17.60463359022224 21.005256274377853 42.51018103475358 18.87992910064633 48 19.38257377219945 23.797745043410973 34.237542596655764 22.582138587733816 49 18.875299478671497 21.04262393746042 39.93644190403124 20.14563467983684 50 19.411839596826063 20.010879611640853 38.0508630111392 22.52641778039388 51 18.73508807029089 20.714747495457182 35.78482839810119 24.765336036150735 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 85.0 1 1080.5 2 2076.0 3 23684.5 4 45293.0 5 32282.0 6 19271.0 7 17825.5 8 16380.0 9 15881.5 10 15383.0 11 14655.5 12 13928.0 13 13223.0 14 12518.0 15 11603.5 16 10689.0 17 9969.0 18 9249.0 19 8519.5 20 7790.0 21 7273.0 22 6756.0 23 6435.5 24 6115.0 25 6153.0 26 6444.0 27 6697.0 28 7149.5 29 7602.0 30 8022.0 31 8442.0 32 8934.0 33 9426.0 34 10253.5 35 11081.0 36 11599.5 37 12118.0 38 12578.5 39 13039.0 40 13831.0 41 14623.0 42 15676.0 43 16729.0 44 18795.5 45 20862.0 46 52777.0 47 84692.0 48 59477.5 49 34263.0 50 31966.0 51 29669.0 52 27164.0 53 24659.0 54 24691.0 55 24723.0 56 24757.0 57 24791.0 58 23285.0 59 21779.0 60 19579.0 61 17379.0 62 15628.0 63 13877.0 64 12339.0 65 10801.0 66 9410.5 67 8020.0 68 6915.0 69 5810.0 70 5092.5 71 4375.0 72 3655.0 73 2935.0 74 2513.0 75 1637.0 76 1183.0 77 948.0 78 713.0 79 539.5 80 366.0 81 274.5 82 183.0 83 135.5 84 88.0 85 60.5 86 33.0 87 26.0 88 19.0 89 13.0 90 7.0 91 4.5 92 2.0 93 1.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 604801.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 47.2765401194923 #Duplication Level Percentage of deduplicated Percentage of total 1 79.74177162132618 37.699150652550195 2 7.321623619433064 6.9228206556789935 3 3.835684604104675 5.4401369121502094 4 2.5281067337343845 4.780805576950091 5 1.8301222240314219 4.3260923373998 6 1.3072092583700987 3.708019856874346 7 0.9116792233943084 3.0170727566636026 8 0.6527510486584307 2.468784891195278 9 0.4452266772242878 1.8943899181256065 >10 1.3221227762898777 9.201161142475248 >50 0.06001943191203032 2.010603262643962 >100 0.03764532391265094 3.1652519849508627 >500 0.0017757228260684395 0.5149494927776519 >1k 0.0028411565217095034 3.3929244701828463 >5k 0.0 0.0 >10k+ 0.0014205782608547517 11.457836089381324 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 23444 3.8763163420695403 No Hit GAATCTGTCTCTTATACACATCTGACGCTGAGGCATTCGTATGCCGTCTTC 16686 2.7589240097155923 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCTGAGGCATTCGTATGCCG 15172 2.5085937357907806 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCTGAGGCATTCGTATGC 12940 2.1395467269399355 No Hit GAACTGTCTCTTATACACATCTGACGCTGAGGCATTCGTATGCCGTCTTCT 4033 0.6668309080176785 No Hit GAATGATCTGTCTCTTATACACATCTGACGCTGAGGCATTCGTATGCCGTC 2930 0.4844568709377134 No Hit GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCTGAGGCATT 2894 0.4785044998272159 No Hit GCTGTCTCTTATACACATCTGACGCTGAGGCATTCGTATGCCGTCTTCTGC 2832 0.46825319402580357 No Hit GAATGACTGTCTCTTATACACATCTGACGCTGAGGCATTCGTATGCCGTCT 2548 0.4212955997096566 No Hit GAATGATACGGCGACTGTCTCTTATACACATCTGACGCTGAGGCATTCGTA 2209 0.3652441050858051 No Hit GAATGCTGTCTCTTATACACATCTGACGCTGAGGCATTCGTATGCCGTCTT 1606 0.26554188898497194 No Hit GAATGATACGGCGACCTGTCTCTTATACACATCTGACGCTGAGGCATTCGT 1156 0.19113725010375313 No Hit CTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 764 0.12632254245611366 No Hit GAATGATACGGCGCTGTCTCTTATACACATCTGACGCTGAGGCATTCGTAT 653 0.10796939819874636 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0646493640056812 0.0 2 0.0 0.0 0.0 0.6094566642581609 0.0 3 0.0 0.0 0.0 0.7104816294946602 0.0 4 0.0 0.0 0.0 1.5074379837334926 0.0 5 0.0 0.0 0.0 4.707333486551775 0.0 6 0.0 0.0 0.0 5.097048450647403 0.0 7 0.0 0.0 0.0 5.672940355588036 0.0 8 0.0 0.0 0.0 6.333488205211301 0.0 9 0.0 0.0 0.0 6.477667860998907 0.0 10 0.0 0.0 0.0 9.487418175565185 0.0 11 0.0 0.0 0.0 9.676405958323482 0.0 12 0.0 0.0 0.0 12.30338574175638 0.0 13 0.0 0.0 0.0 12.509899950562252 0.0 14 0.0 0.0 0.0 12.675408936162473 0.0 15 0.0 0.0 0.0 13.171605205679223 0.0 16 0.0 0.0 0.0 13.456988331699186 0.0 17 0.0 0.0 0.0 13.584964310574883 0.0 18 0.0 0.0 0.0 13.686650650379216 0.0 19 0.0 0.0 0.0 14.366543706111598 0.0 20 0.0 0.0 0.0 14.509235269121579 0.0 21 0.0 0.0 0.0 14.613236419913326 0.0 22 0.0 0.0 0.0 14.81958528507724 0.0 23 0.0 0.0 0.0 14.921767655807447 0.0 24 0.0 0.0 0.0 15.016178875365616 0.0 25 0.0 0.0 0.0 15.099016039986706 0.0 26 0.0 0.0 0.0 15.214095214789658 0.0 27 0.0 0.0 0.0 15.355464028663974 0.0 28 0.0 0.0 0.0 15.447560437234726 0.0 29 0.0 0.0 0.0 15.55867136463068 0.0 30 0.0 0.0 0.0 15.691772996407083 0.0 31 0.0 0.0 0.0 15.793790023495331 0.0 32 0.0 0.0 0.0 15.913168132989199 0.0 33 0.0 0.0 0.0 16.03105814970544 0.0 34 0.0 0.0 0.0 16.208967908452532 0.0 35 0.0 0.0 0.0 16.362241464547843 0.0 36 0.0 0.0 0.0 16.49782325095362 0.0 37 0.0 0.0 0.0 16.648947339703472 0.0 38 0.0 0.0 0.0 16.843060775362474 0.0 39 0.0 0.0 0.0 17.2216977154469 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CAACGAC 25 3.8886054E-5 45.000004 10 GCAACGA 25 3.8886054E-5 45.000004 9 CGTCCAA 25 3.8886054E-5 45.000004 26 CGTTTTT 16090 0.0 44.356747 1 CCGATGA 495 0.0 42.727272 18 CGATGAA 505 0.0 42.32673 19 GATACCT 1700 0.0 42.088234 5 TGATACC 1690 0.0 42.071007 4 TGCCAGT 180 0.0 41.25 24 TAGCATA 180 0.0 41.25 30 ATACCTG 1745 0.0 41.1318 6 ACGGCTG 1530 0.0 40.882355 8 TACGGCT 1525 0.0 40.868855 7 TACCTGT 1800 0.0 40.500004 7 GAATCTG 1975 0.0 40.44304 1 GTTGATC 190 0.0 40.263157 16 CCGTTTG 45 1.925764E-8 40.0 1 AATCTGT 1995 0.0 39.924812 2 GATGAAT 550 0.0 39.68182 20 ACAACGA 40 3.4546065E-7 39.375 13 >>END_MODULE