SRR2933241.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2933241.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	453116
Sequences flagged as poor quality	0
Sequence length	51
%GC	37

Per base quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	36426	8.039001050503623	No Hit
GAATGATACCTGTCTCTTATACACATCTGACGCTGAGGCATTCGTATGCCG	6756	1.4910089248669216	No Hit
GAATGATACGGCTGTCTCTTATACACATCTGACGCTGAGGCATTCGTATGC	5016	1.1070012976809471	No Hit
GAATCTGTCTCTTATACACATCTGACGCTGAGGCATTCGTATGCCGTCTTC	4649	1.0260065855101121	No Hit
GAACTGTCTCTTATACACATCTGACGCTGAGGCATTCGTATGCCGTCTTCT	1411	0.3113992884824195	No Hit
GCTGTCTCTTATACACATCTGACGCTGAGGCATTCGTATGCCGTCTTCTGC	1309	0.28888849654393134	No Hit
GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCTGAGGCATT	1257	0.27741240653607463	No Hit
GAATGATCTGTCTCTTATACACATCTGACGCTGAGGCATTCGTATGCCGTC	802	0.17699661896732843	No Hit
GAATGATACGGCGACTGTCTCTTATACACATCTGACGCTGAGGCATTCGTA	682	0.15051333433381298	No Hit
GAATCTTTCTCTTATACACATCTGACGCTGAGGCATTCGTATGCCGTCTTC	570	0.12579560200919854	No Hit
GAATGACTGTCTCTTATACACATCTGACGCTGAGGCATTCGTATGCCGTCT	554	0.12226449739139646	No Hit
GAATGATACCTGTCTCTTCTACACATCTGACGCTGAGGCATTCGTATGCCG	509	0.11233326565382815	No Hit
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTA	473	0.10438828026377353	No Hit
GAATGCTGTCTCTTATACACATCTGACGCTGAGGCATTCGTATGCCGTCTT	473	0.10438828026377353	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TGATTCG	35	1.2097553E-7	45.000004	26
GACGGGA	30	2.1625801E-6	45.000004	4
TACGCGG	25	3.887052E-5	45.0	2
CGTTTTT	13815	0.0	44.478825	1
TACGGCT	685	0.0	42.043793	7
GATACCT	840	0.0	41.785717	5
ACGGCTG	685	0.0	41.71533	8
TGATACC	865	0.0	40.83815	4
GAATGAT	2545	0.0	40.756382	1
ACCGGTG	105	0.0	40.714287	17
AATGATA	2380	0.0	40.55672	2
ATGATAC	2415	0.0	40.434784	3
CGACCAC	585	0.0	40.384617	12
ATACGGC	1570	0.0	40.2707	6
GTTTTTT	15500	0.0	40.253223	2
ATGGGCG	45	1.9239451E-8	40.0	5
GCGACCA	605	0.0	39.79339	11
CGTATGG	40	3.4520417E-7	39.375	2
ACGGCGA	870	0.0	39.310345	8
TTACACG	155	0.0	39.19355	34