##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2933240.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 425902 Sequences flagged as poor quality 0 Sequence length 51 %GC 36 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 29.34854731839719 31.0 28.0 31.0 25.0 34.0 2 28.458095993914093 31.0 26.0 33.0 16.0 34.0 3 28.454219515287555 31.0 26.0 33.0 16.0 34.0 4 33.04914745645712 35.0 32.0 37.0 28.0 37.0 5 34.225072904095306 35.0 33.0 37.0 30.0 37.0 6 33.562002526402786 35.0 33.0 37.0 28.0 37.0 7 33.65590440993468 35.0 33.0 37.0 29.0 37.0 8 33.42399660015684 35.0 33.0 37.0 28.0 37.0 9 34.79071946128452 37.0 34.0 39.0 28.0 39.0 10 34.56720794924654 37.0 32.0 39.0 27.0 39.0 11 34.927358875985554 37.0 34.0 39.0 28.0 39.0 12 34.949394461636714 37.0 34.0 39.0 27.0 39.0 13 35.139100074665066 37.0 34.0 39.0 27.0 39.0 14 35.91478321303962 38.0 34.0 40.0 27.0 41.0 15 36.22099919699837 38.0 34.0 40.0 27.0 41.0 16 36.1769961164775 38.0 34.0 40.0 30.0 41.0 17 35.39683072631732 37.0 33.0 40.0 27.0 41.0 18 35.1684448535109 37.0 33.0 39.0 27.0 40.0 19 34.47920413616278 37.0 33.0 38.0 27.0 40.0 20 33.65759493968096 35.0 32.0 37.0 26.0 40.0 21 34.17802217411517 35.0 33.0 38.0 27.0 40.0 22 34.678693690097724 35.0 33.0 39.0 29.0 40.0 23 34.946856319059314 35.0 33.0 39.0 30.0 40.0 24 34.473639475747945 35.0 33.0 38.0 27.0 40.0 25 33.526205559025314 35.0 33.0 38.0 24.0 40.0 26 33.494733530248745 35.0 32.0 38.0 24.0 40.0 27 34.18997797615414 35.0 33.0 38.0 26.0 40.0 28 33.881186282290294 35.0 33.0 39.0 24.0 40.0 29 33.90501335988091 35.0 33.0 39.0 24.0 40.0 30 33.18112147865002 35.0 32.0 38.0 21.0 40.0 31 33.08620997318632 35.0 32.0 38.0 21.0 40.0 32 32.51524763912825 35.0 31.0 38.0 18.0 40.0 33 31.89327356997619 35.0 31.0 39.0 14.0 40.0 34 31.309735572972187 35.0 30.0 39.0 10.0 40.0 35 30.831890904480375 35.0 27.0 39.0 8.0 40.0 36 30.185735216082573 35.0 23.0 39.0 7.0 40.0 37 30.127313325600724 35.0 23.0 39.0 7.0 40.0 38 29.689940408826445 35.0 22.0 39.0 7.0 40.0 39 29.488919986287925 35.0 21.0 39.0 7.0 40.0 40 29.13297660025076 35.0 21.0 39.0 7.0 40.0 41 28.690013195523854 34.0 20.0 38.0 7.0 40.0 42 28.887070264990538 35.0 20.0 39.0 7.0 40.0 43 28.814882296866415 35.0 19.0 38.0 7.0 40.0 44 28.93328512192946 35.0 18.0 39.0 7.0 40.0 45 28.89251987546431 35.0 20.0 39.0 7.0 40.0 46 28.752755328690636 35.0 20.0 39.0 7.0 40.0 47 28.570659447478526 34.0 20.0 38.0 7.0 40.0 48 28.433348516794943 34.0 18.0 38.0 7.0 40.0 49 28.605028856403585 35.0 19.0 38.0 7.0 40.0 50 28.572892355518405 34.0 20.0 38.0 7.0 40.0 51 27.424562458030252 33.0 18.0 37.0 7.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 4.0 9 10.0 10 23.0 11 27.0 12 41.0 13 54.0 14 71.0 15 100.0 16 219.0 17 467.0 18 997.0 19 1676.0 20 2786.0 21 4008.0 22 5657.0 23 8253.0 24 11780.0 25 16895.0 26 22272.0 27 23514.0 28 21847.0 29 20554.0 30 20692.0 31 22260.0 32 25523.0 33 29649.0 34 33438.0 35 37385.0 36 40581.0 37 40367.0 38 30471.0 39 4280.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 27.811797080079455 2.351479917915389 29.569478424614115 40.26724457739104 2 38.63682255542355 18.54745927466882 30.806382688975397 12.009335480932233 3 11.072969838131778 18.845415142450612 57.57404285492906 12.507572164488545 4 10.151631126409361 2.591441223567863 72.95504599649685 14.301881653525928 5 22.310531530727726 3.1152706491164635 58.64494649003762 15.929251330118197 6 12.276767894961752 16.211241083629567 61.655263417405884 9.8567276040028 7 48.41536315866091 1.2815154659992205 47.630206009833245 2.672915365506619 8 47.375452568900826 12.523538278758965 36.59996900695465 3.501040145385558 9 45.123760865175555 2.4951749463491604 35.366821475362876 17.014242713112406 10 30.972148522430043 14.16851764020831 41.898605782550916 12.96072805481073 11 24.26990246582547 14.376781513118042 47.59663021070575 13.756685810350739 12 17.400247005179594 12.880427891862448 50.73702401021831 18.982301092739647 13 16.44157576156017 14.323013275354423 57.95276847725533 11.282642485830072 14 14.362928561030472 20.981587313513437 48.73562462726167 15.91985949819442 15 10.74895163676151 14.29342900479453 60.10185441721335 14.855764941230612 16 12.57143662157022 15.790252217646314 48.90092086912012 22.73739029166334 17 13.29648604608572 16.515301642161813 53.349596855614664 16.8386154561378 18 13.191532324337524 15.820306079802396 52.107057492099116 18.88110410376096 19 14.069433813412473 18.36948405971327 48.47194894600166 19.089133180872594 20 16.573296204291125 17.040305046700883 54.151424506107034 12.234974242900948 21 15.898962672164018 22.349038041615206 48.953984719489455 12.798014566731315 22 13.68155115496053 14.621438734732402 51.96500603425201 19.732004076055055 23 14.704321651459725 21.732464275819318 49.81944203126541 13.743772041455546 24 16.085390535850973 16.36573671877568 48.406440918333324 19.142431827040024 25 12.917290832163268 24.85172645350339 46.61964489483496 15.611337819498383 26 14.047832599987792 15.695394715216176 51.47803954900423 18.778733135791803 27 16.98442364675442 18.784368234946065 46.66707364605003 17.564134472249485 28 12.343684697418656 17.98888007100225 53.03379650717771 16.63363872440139 29 20.266634108315998 14.797535583303201 47.17798930270344 17.757841005677363 30 16.528685002653194 20.457757887964835 49.75604716577992 13.25750994360205 31 18.5357194847641 15.595606501026058 47.151457377518774 18.71721663669107 32 20.035829838789205 20.870294105216693 42.88146099337406 16.21241506262004 33 16.852233612427273 17.589727214241773 44.02069020572808 21.537348967602878 34 24.565040784030128 19.72261224413128 40.26348784462153 15.44885912721706 35 18.553563965419276 24.11705040126602 38.7227578175261 18.60662781578861 36 20.25771186798841 23.60190842024691 40.02141337678621 16.118966334978467 37 20.45846227535912 22.01961953688877 38.85541744344943 18.66650074430268 38 17.899892463524473 23.108132856854393 41.28555395372644 17.706420725894688 39 23.210269029025458 22.44859146000723 35.17616728731023 19.164972223657085 40 17.859507586252235 24.733624167061908 40.31279496222135 17.0940732844645 41 20.20112608064766 27.267775215894734 34.87257632037417 17.658522383083433 42 16.853407591417742 25.413827594141374 39.79694859380796 17.935816220632915 43 19.95482528844664 24.676099196528778 34.90356936572263 20.46550614930195 44 21.71156744978892 22.066109104911458 36.00969237054534 20.212631074754288 45 16.88487022836239 22.54579692041831 36.731924245483704 23.83740860573559 46 22.492733070048978 24.953627829876357 33.49855130992576 19.05508779014891 47 15.634347807711633 21.379800987081534 44.56917319007659 18.41667801513024 48 20.68222267094308 23.260045738221468 34.474832238402264 21.582899352433188 49 16.99639823245723 22.040985954515357 40.65606641903536 20.306549393992047 50 19.333790402486958 20.88085991613094 37.70257007480594 22.08277960657616 51 18.78507262234035 20.771914665815142 35.93338373616466 24.50962897567985 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 94.0 1 694.5 2 1295.0 3 15700.0 4 30105.0 5 22357.0 6 14609.0 7 14160.0 8 13711.0 9 13553.5 10 13396.0 11 12585.0 12 11774.0 13 11045.5 14 10317.0 15 9362.5 16 8408.0 17 7841.5 18 7275.0 19 6751.5 20 6228.0 21 5686.5 22 5145.0 23 5001.0 24 4857.0 25 4716.5 26 4505.5 27 4435.0 28 4802.5 29 5170.0 30 5634.0 31 6098.0 32 6534.0 33 6970.0 34 7464.5 35 7959.0 36 8546.5 37 9134.0 38 9559.0 39 9984.0 40 10528.0 41 11072.0 42 12063.5 43 13055.0 44 14512.0 45 15969.0 46 41198.5 47 66428.0 48 45975.5 49 25523.0 50 23794.5 51 22066.0 52 19439.5 53 16813.0 54 15560.0 55 14307.0 56 14043.5 57 13780.0 58 12597.5 59 11415.0 60 10372.5 61 9330.0 62 8526.0 63 7722.0 64 6834.5 65 5947.0 66 4788.5 67 3630.0 68 3054.5 69 2479.0 70 2095.5 71 1712.0 72 1468.0 73 1224.0 74 1002.0 75 646.0 76 512.0 77 407.0 78 302.0 79 231.0 80 160.0 81 116.5 82 73.0 83 54.0 84 35.0 85 24.5 86 14.0 87 12.0 88 10.0 89 6.0 90 2.0 91 1.5 92 1.0 93 1.0 94 1.0 95 0.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 425902.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 43.56486505337669 #Duplication Level Percentage of deduplicated Percentage of total 1 84.61356870853523 36.86178702471954 2 5.18544315906894 4.518062629335873 3 2.043933724446208 2.67131090650634 4 1.238055711421623 2.1574291998658115 5 0.9585442880921933 2.0879426279210715 6 0.7895773665927588 2.0638698854888444 7 0.7057847863079153 2.152319328056145 8 0.6022281010012709 2.098878876117734 9 0.5330265824291935 2.0899108020051345 >10 3.2143606897731205 22.24415170413434 >50 0.07516891397054769 2.204031357601655 >100 0.03268213650893378 2.6309319187908637 >500 0.0016341068254466886 0.4494439482447818 >1k 0.0038129159260422733 3.7910858063139568 >5k 0.0 0.0 >10k+ 0.0021788091005955847 11.978843984897882 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 14126 3.316725443881456 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCGGTCTGAATCGTATGCCG 13098 3.0753553634404156 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCGGTCTGAATCGTATGC 11679 2.742180125944466 No Hit GAATCTGTCTCTTATACACATCTGACGCGGTCTGAATCGTATGCCGTCTTC 11577 2.7182309545388375 No Hit GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCGGTCTGAAT 2835 0.6656460875976163 No Hit GAACTGTCTCTTATACACATCTGACGCGGTCTGAATCGTATGCCGTCTTCT 2810 0.6597761926452564 No Hit GAATGATCTGTCTCTTATACACATCTGACGCGGTCTGAATCGTATGCCGTC 2486 0.5837023540626717 No Hit GAATGATACGGCGACTGTCTCTTATACACATCTGACGCGGTCTGAATCGTA 2400 0.5635099154265535 No Hit GAATGACTGTCTCTTATACACATCTGACGCGGTCTGAATCGTATGCCGTCT 2215 0.5200726927790901 No Hit GCTGTCTCTTATACACATCTGACGCGGTCTGAATCGTATGCCGTCTTCTGC 2161 0.5073937196819925 No Hit GAATGATACGGCGACCTGTCTCTTATACACATCTGACGCGGTCTGAATCGT 1069 0.2509967081629107 No Hit GAATGCTGTCTCTTATACACATCTGACGCGGTCTGAATCGTATGCCGTCTT 720 0.16905297462796606 No Hit GAATGATACGGCCTGTCTCTTATACACATCTGACGCGGTCTGAATCGTATG 596 0.1399382956642608 No Hit GAATGATACGGCGCTGTCTCTTATACACATCTGACGCGGTCTGAATCGTAT 578 0.13571197129856163 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTA 490 0.11504994106625469 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAAA 473 0.11105841249864992 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0781870007654343 0.0 2 0.0 0.0 0.0 0.6792642438870914 0.0 3 0.0 0.0 0.0 0.7788176622791159 0.0 4 0.0 0.0 0.0 1.5710186850496124 0.0 5 0.0 0.0 0.0 4.720099929091669 0.0 6 0.0 0.0 0.0 4.985653976736432 0.0 7 0.0 0.0 0.0 5.646604148372161 0.0 8 0.0 0.0 0.0 6.389263257744739 0.0 9 0.0 0.0 0.0 6.513939826532864 0.0 10 0.0 0.0 0.0 10.302370028785965 0.0 11 0.0 0.0 0.0 10.547966433592704 0.0 12 0.0 0.0 0.0 13.903902775755926 0.0 13 0.0 0.0 0.0 14.180961817507313 0.0 14 0.0 0.0 0.0 14.383590591262779 0.0 15 0.0 0.0 0.0 15.114275114932543 0.0 16 0.0 0.0 0.0 15.49699226582641 0.0 17 0.0 0.0 0.0 15.66299289507915 0.0 18 0.0 0.0 0.0 15.793069767223447 0.0 19 0.0 0.0 0.0 16.729435410023903 0.0 20 0.0 0.0 0.0 16.923846330846064 0.0 21 0.0 0.0 0.0 17.07200247944363 0.0 22 0.0 0.0 0.0 17.352113866570242 0.0 23 0.0 0.0 0.0 17.4880606336669 0.0 24 0.0 0.0 0.0 17.61297199825312 0.0 25 0.0 0.0 0.0 17.713464599837522 0.0 26 0.0 0.0 0.0 17.84213269719325 0.0 27 0.0 0.0 0.0 18.02104709534118 0.0 28 0.0 0.0 0.0 18.1208353095313 0.0 29 0.0 0.0 0.0 18.235885250597555 0.0 30 0.0 0.0 0.0 18.350230804269525 0.0 31 0.0 0.0 0.0 18.468098294912913 0.0 32 0.0 0.0 0.0 18.582913440181073 0.0 33 0.0 0.0 0.0 18.704068071997785 0.0 34 0.0 0.0 0.0 18.889321956694264 0.0 35 0.0 0.0 0.0 19.03653892209945 0.0 36 0.0 0.0 0.0 19.175538034571332 0.0 37 0.0 0.0 0.0 19.331677240304106 0.0 38 0.0 0.0 0.0 19.5037825603073 0.0 39 0.0 0.0 0.0 19.685984099628552 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGGGTAT 30 2.162271E-6 45.000004 6 GATACCG 20 7.02828E-4 45.000004 27 CGACGAA 20 7.02828E-4 45.000004 19 GGCAACG 20 7.02828E-4 45.000004 8 ATCCGGC 20 7.02828E-4 45.000004 6 ACCGTCT 20 7.02828E-4 45.000004 40 TTCGAAA 20 7.02828E-4 45.000004 33 TTCTCCG 20 7.02828E-4 45.000004 1 TCAAGCG 65 0.0 44.999996 17 AACACGT 65 0.0 44.999996 41 CGTTTTT 11820 0.0 44.219543 1 TGATACC 1525 0.0 42.934425 4 GATACCT 1535 0.0 42.801304 5 TACGGCT 1480 0.0 42.56757 7 CACCGGT 90 0.0 42.5 16 ACGGCTG 1490 0.0 42.28188 8 ACCGAGG 70 0.0 41.785717 17 AGACACG 70 0.0 41.785717 24 CGATGAA 350 0.0 41.785713 19 CGGCTGT 1525 0.0 41.60656 9 >>END_MODULE