##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2933239.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 277782 Sequences flagged as poor quality 0 Sequence length 51 %GC 35 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 28.465778920160414 31.0 27.0 31.0 16.0 33.0 2 28.639307082532344 31.0 30.0 33.0 16.0 34.0 3 28.758015278167772 31.0 30.0 33.0 16.0 34.0 4 31.9618369800779 35.0 30.0 37.0 19.0 37.0 5 33.67514453780303 35.0 33.0 37.0 28.0 37.0 6 32.61147950551152 35.0 33.0 37.0 17.0 37.0 7 32.30366258432872 35.0 32.0 35.0 26.0 37.0 8 32.81283884484956 35.0 32.0 36.0 26.0 37.0 9 33.16332231750077 35.0 32.0 37.0 25.0 39.0 10 31.65400565911398 35.0 28.0 39.0 15.0 39.0 11 32.52930715453125 35.0 30.0 39.0 17.0 39.0 12 33.26904191056296 35.0 31.0 39.0 23.0 39.0 13 33.54117617412216 35.0 32.0 39.0 25.0 39.0 14 33.68450799547847 37.0 32.0 40.0 19.0 41.0 15 34.29254955324679 37.0 32.0 40.0 25.0 41.0 16 34.44841278412568 37.0 32.0 40.0 25.0 41.0 17 32.37148195347431 35.0 27.0 40.0 18.0 41.0 18 33.05642194238648 36.0 30.0 39.0 23.0 39.0 19 32.83235774816223 36.0 31.0 37.0 21.0 39.0 20 32.271018280522135 34.0 30.0 36.0 24.0 39.0 21 32.67677171306996 35.0 31.0 37.0 24.0 39.0 22 32.75027899575927 34.0 30.0 37.0 25.0 39.0 23 33.751711773981036 35.0 32.0 38.0 27.0 40.0 24 32.15533043897733 35.0 31.0 37.0 21.0 39.0 25 31.374113513474594 34.0 29.0 37.0 18.0 39.0 26 30.353043033745887 33.0 25.0 37.0 18.0 39.0 27 32.14287822825093 34.0 30.0 37.0 22.0 39.0 28 32.168736635203146 35.0 31.0 37.0 21.0 39.0 29 32.31019288506815 35.0 30.0 38.0 21.0 40.0 30 31.393942012081418 34.0 29.0 37.0 18.0 40.0 31 31.70724164992692 35.0 30.0 37.0 20.0 39.0 32 31.53833581729558 35.0 30.0 37.0 18.0 39.0 33 31.411088551454018 35.0 30.0 38.0 15.0 40.0 34 30.46216817504374 35.0 27.0 38.0 10.0 40.0 35 29.87396951566336 35.0 25.0 38.0 8.0 40.0 36 29.1372875132298 34.0 23.0 37.0 7.0 40.0 37 29.228027733978443 35.0 23.0 38.0 7.0 40.0 38 29.005219920657208 34.0 22.0 38.0 7.0 40.0 39 28.701208141636247 34.0 22.0 37.0 7.0 40.0 40 28.40649862122096 33.0 21.0 37.0 7.0 40.0 41 27.899179932465028 33.0 20.0 37.0 7.0 39.0 42 28.340961617383417 33.0 21.0 37.0 7.0 40.0 43 28.28566285792456 33.0 20.0 37.0 7.0 40.0 44 28.25277735778416 34.0 20.0 37.0 7.0 40.0 45 28.353550626030483 34.0 20.0 37.0 7.0 40.0 46 28.170277411783342 34.0 20.0 37.0 7.0 40.0 47 28.097839312842446 34.0 20.0 37.0 7.0 40.0 48 27.898135948333586 33.0 20.0 37.0 7.0 40.0 49 27.73774758623669 33.0 19.0 37.0 7.0 39.0 50 27.87858464551339 33.0 20.0 37.0 7.0 40.0 51 26.347398319545544 31.0 18.0 35.0 7.0 38.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 4.0 9 8.0 10 13.0 11 11.0 12 30.0 13 34.0 14 63.0 15 149.0 16 365.0 17 600.0 18 1061.0 19 1695.0 20 2452.0 21 3606.0 22 4885.0 23 6569.0 24 9204.0 25 12245.0 26 15688.0 27 17016.0 28 16658.0 29 16835.0 30 18053.0 31 19774.0 32 22101.0 33 24063.0 34 26330.0 35 28386.0 36 18650.0 37 9258.0 38 1953.0 39 23.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 22.358540150189718 2.3295245912262135 31.724877781857714 43.58705747672636 2 43.5712177174907 12.83236494805279 31.637039117005422 11.959378217451095 3 11.505785112066297 12.889604078018014 63.157080012383815 12.447530797531877 4 10.525160017567734 2.543001346379535 72.45177873296326 14.480059903089474 5 18.618916992461713 3.0527535981453084 63.40691621487353 14.921413194519442 6 12.35249224211792 11.427666299472248 65.46032500305995 10.759516455349878 7 47.706834856110184 1.2542209358417753 48.233146856167785 2.8057973518802513 8 48.55462196974606 8.80834611313908 38.99388729291315 3.643144624201712 9 45.501148382544585 2.3399644325406257 38.70265171969386 13.456235465220928 10 28.534246279456553 14.142025041219371 44.39164524699225 12.932083432331828 11 21.873987515389768 14.441540488584574 50.592190998696815 13.092280997328839 12 17.025941205693673 13.100200876946671 53.359468936072176 16.514388981287485 13 15.225248576221642 14.459540214988731 59.19786019252508 11.117351016264552 14 13.378836641683044 17.785529659949166 52.541921362795286 16.2937123355725 15 10.46108099156893 14.202504121937345 60.96075339654837 14.375661489945351 16 11.981697878192252 13.789230403697864 52.83567689771116 21.393394820398733 17 12.818325161457548 14.644217407895399 55.66559388297298 16.871863547674078 18 12.672167383055777 14.127985254624129 55.33223894996796 17.867608412352133 19 14.042306556940334 17.064460620198574 51.48317745570268 17.41005536715842 20 15.763800390234067 15.951717533893483 56.150146517772924 12.134335558099517 21 15.741480729492913 19.40982497066045 51.40325867046821 13.445435629378434 22 13.314397621156157 14.823494682880819 53.38322857492565 18.478879121037362 23 13.980027503581946 20.14637377511862 51.411178550086035 14.462420171213397 24 14.451980329898987 15.208688827929814 51.9875297895472 18.351801052624 25 12.624288110820716 20.358410552159604 50.341994801679014 16.67530653534066 26 13.353277030189142 15.986996997645637 53.711543584537516 16.948182387627707 27 14.514619377785456 17.655931629839227 50.78622804933365 17.043220943041664 28 11.835900094318566 16.793384740551947 55.77935215384726 15.591363011282228 29 17.629652029289154 14.09522575256856 51.22146143378621 17.05366078435608 30 15.01177182106832 18.582197550597233 52.92171558992303 13.484315038411415 31 16.976261960818196 15.688201539336601 50.005399917921245 17.330136581923956 32 18.102324844662363 19.602422043184944 47.09664413100921 15.198608981143485 33 15.516124154912845 17.212418371240755 47.36951998329626 19.901937490550143 34 21.373235126826074 19.187348352305044 43.971531632719184 15.4678848881497 35 17.3013370196773 22.098984095441747 42.65683161615944 17.942847268721515 36 18.977471542432557 21.16407830600975 43.85093346581132 16.007516685746374 37 18.64123665320287 21.10611918698836 42.27991734525635 17.97272681455242 38 16.693306261744823 21.644671001000784 44.903197471398435 16.758825265855958 39 20.692485474220792 21.31131606799577 39.849234291638766 18.146964166144674 40 17.579612789885594 22.891332051752812 43.187463550554035 16.341591607807562 41 18.461599383689368 24.960580599174893 39.532799101453655 17.045020915682084 42 16.23251326579836 23.711759581254366 42.37243593897373 17.683291213973547 43 18.29528191171494 22.68541518168924 39.72359620133774 19.29570670525808 44 20.529767947527198 20.81596359735332 39.89171364595258 18.7625548091669 45 16.700506152306485 21.281796516692946 40.54834366517629 21.46935366582428 46 19.902297485078225 23.497562837044878 37.719866658026795 18.8802730198501 47 15.593522978450727 20.50600830867371 45.850343074785265 18.0501256380903 48 19.69422064784615 21.447034005083125 38.63533274294231 20.22341260412842 49 16.353831421762386 20.902362284093282 42.33967643691816 20.40412985722617 50 17.920887602508444 20.050615230648493 40.55194361045712 21.476553556385944 51 17.77796977485942 19.97645635786336 39.365401645894984 22.880172221382235 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 69.0 1 266.5 2 464.0 3 16216.5 4 31969.0 5 21102.5 6 10236.0 7 9764.5 8 9293.0 9 9210.0 10 9127.0 11 8507.0 12 7887.0 13 7240.5 14 6594.0 15 5891.0 16 5188.0 17 4774.5 18 4361.0 19 4027.0 20 3693.0 21 3359.5 22 3026.0 23 2905.0 24 2784.0 25 2751.5 26 2586.5 27 2454.0 28 2669.5 29 2885.0 30 3140.5 31 3396.0 32 3664.0 33 3932.0 34 4242.5 35 4553.0 36 4952.5 37 5352.0 38 5691.0 39 6030.0 40 6488.5 41 6947.0 42 7769.0 43 8591.0 44 9717.5 45 10844.0 46 20193.0 47 29542.0 48 24442.0 49 19342.0 50 18083.5 51 16825.0 52 14345.5 53 11866.0 54 10717.5 55 9569.0 56 9037.5 57 8506.0 58 7814.0 59 7122.0 60 6534.5 61 5947.0 62 5451.0 63 4955.0 64 4454.5 65 3954.0 66 3245.5 67 2537.0 68 2131.5 69 1726.0 70 1474.0 71 1222.0 72 1038.5 73 855.0 74 713.0 75 462.0 76 353.0 77 297.5 78 242.0 79 182.5 80 123.0 81 94.0 82 65.0 83 45.5 84 26.0 85 26.0 86 26.0 87 19.0 88 12.0 89 6.0 90 0.0 91 1.0 92 2.0 93 1.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 277782.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 40.271765960068535 #Duplication Level Percentage of deduplicated Percentage of total 1 77.55179135291928 31.23147591148832 2 8.325927087429287 6.705995741310947 3 3.405814697095952 4.114745171544296 4 2.266539454952996 3.651101858765134 5 1.683830695948733 3.390541785181335 6 1.2679397756747364 3.0637304338460862 7 1.0340579247621582 2.915033711462305 8 0.7735208292151142 2.4920839839511375 9 0.6472449264644062 2.34591265776747 >10 2.9210431817391442 17.911195079991685 >50 0.06760752047381492 1.899065283559256 >100 0.04474027090178929 3.4826206697023845 >500 0.0029826847267859524 0.8344195764152413 >1k 0.004971141211309921 4.524043567138106 >5k 9.942282422619841E-4 2.414771816391709 >10k+ 9.942282422619841E-4 9.023262751484587 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 22536 8.112836684882389 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCGGTCTGAATCGTATGCCG 6031 2.1711269988696174 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCGGTCTGAATCGTATGC 4618 1.6624547306880935 No Hit GAATCTGTCTCTTATACACATCTGACGCGGTCTGAATCGTATGCCGTCTTC 3255 1.1717821889107285 No Hit GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCGGTCTGAAT 1302 0.4687128755642914 No Hit GCTGTCTCTTATACACATCTGACGCGGTCTGAATCGTATGCCGTCTTCTGC 1082 0.3895140793859933 No Hit GAACTGTCTCTTATACACATCTGACGCGGTCTGAATCGTATGCCGTCTTCT 1042 0.3751142982626664 No Hit GAATGATCTGTCTCTTATACACATCTGACGCGGTCTGAATCGTATGCCGTC 822 0.29591550208436834 No Hit GAATGATACGGCGACTGTCTCTTATACACATCTGACGCGGTCTGAATCGTA 758 0.2728758522870452 No Hit GAATGACTGTCTCTTATACACATCTGACGCGGTCTGAATCGTATGCCGTCT 504 0.18143724215391926 No Hit GAATGATACCTGTCTCTTCTACACATCTGACGCGGTCTGAATCGTATGCCG 480 0.1727973734799231 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTA 388 0.13967787689627117 No Hit GAATGATACGGCGACCTGTCTCTTATACACATCTGACGCGGTCTGAATCGT 379 0.1364379261435226 No Hit GAATCTTTCTCTTATACACATCTGACGCGGTCTGAATCGTATGCCGTCTTC 355 0.12779805746952647 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAAA 347 0.12491810124486108 No Hit CTGTCTCTTATACACATCTGACGCGGTCTGAATCGTATGCCGTCTTCTGCT 296 0.10655838031261924 No Hit GAATGACTCTCTCTTATACACATCTGACGCGGTCTGAATCGTATGCCGTCT 285 0.10259844050370434 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.13067801369419185 0.0 2 0.0 0.0 0.0 0.7667883448171587 0.0 3 0.0 0.0 0.0 0.9539854994204088 0.0 4 0.0 0.0 0.0 1.619615381846196 0.0 5 0.0 0.0 0.0 3.237790785580059 0.0 6 0.0 0.0 0.0 3.547386079731588 0.0 7 0.0 0.0 0.0 3.942660071566912 0.0 8 0.0 0.0 0.0 4.523691239893154 0.0 9 0.0 0.0 0.0 4.703328509406657 0.0 10 0.0 0.0 0.0 7.88028021974066 0.0 11 0.0 0.0 0.0 8.584069522143263 0.0 12 0.0 0.0 0.0 11.003232750862187 0.0 13 0.0 0.0 0.0 11.2725086578684 0.0 14 0.0 0.0 0.0 11.419386425326335 0.0 15 0.0 0.0 0.0 11.924818742755111 0.0 16 0.0 0.0 0.0 12.260333642928627 0.0 17 0.0 0.0 0.0 12.551209221619832 0.0 18 0.0 0.0 0.0 12.83920484408637 0.0 19 0.0 0.0 0.0 13.681592039800995 0.0 20 0.0 0.0 0.0 13.984347437918943 0.0 21 0.0 0.0 0.0 14.310862474890381 0.0 22 0.0 0.0 0.0 14.799735044027331 0.0 23 0.0 0.0 0.0 15.12877004269535 0.0 24 0.0 0.0 0.0 15.37608628348849 0.0 25 0.0 0.0 0.0 15.581643159023983 0.0 26 0.0 0.0 0.0 15.781440122110144 0.0 27 0.0 0.0 0.0 15.988076981229886 0.0 28 0.0 0.0 0.0 16.174194152248887 0.0 29 0.0 0.0 0.0 16.367511213829548 0.0 30 0.0 0.0 0.0 16.571268116724625 0.0 31 0.0 0.0 0.0 16.766385150945705 0.0 32 0.0 0.0 0.0 16.975181977233945 0.0 33 0.0 0.0 0.0 17.158779186556366 0.0 34 0.0 0.0 0.0 17.360016127754857 0.0 35 0.0 0.0 0.0 17.57925279535751 0.0 36 0.0 0.0 0.0 17.778329769387504 0.0 37 0.0 0.0 0.0 17.969846858327752 0.0 38 0.0 0.0 0.0 18.195563427435903 0.0 39 0.0 0.0 0.0 18.45043955331879 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGGGCAC 45 3.8198777E-10 45.000004 6 ACCCGGT 45 3.8198777E-10 45.000004 39 CACCGGT 90 0.0 45.000004 16 GTTATAC 30 2.1595388E-6 45.000004 33 CTTGTCG 20 7.024041E-4 45.0 1 CATGGGT 20 7.024041E-4 45.0 4 CCGATGA 95 0.0 45.0 18 GACACGA 25 3.8831437E-5 45.0 25 ACTCTGA 20 7.024041E-4 45.0 42 GTCGTTT 20 7.024041E-4 45.0 9 CGGTGTA 25 3.8831437E-5 45.0 19 CACACCG 25 3.8831437E-5 45.0 17 TCATACT 25 3.8831437E-5 45.0 40 GACTGAT 25 3.8831437E-5 45.0 1 CCACCGG 100 0.0 45.0 15 TGCTACG 65 0.0 44.999996 4 CGTTTTT 9180 0.0 44.534313 1 TACGGCT 600 0.0 44.25 7 CGACCAC 530 0.0 43.301888 12 ACGGCTG 615 0.0 43.17073 8 >>END_MODULE