SRR2933237.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2933237.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	520242
Sequences flagged as poor quality	0
Sequence length	51
%GC	36

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	38334	7.3684938932266135	No Hit
GAATGATACCTGTCTCTTATACACATCTGACGCGCTTCTGTTCGTATGCCG	7418	1.4258748813052387	No Hit
GAATCTGTCTCTTATACACATCTGACGCGCTTCTGTTCGTATGCCGTCTTC	5820	1.1187101387431235	No Hit
GAATGATACGGCTGTCTCTTATACACATCTGACGCGCTTCTGTTCGTATGC	5642	1.0844952925753784	No Hit
GAACTGTCTCTTATACACATCTGACGCGCTTCTGTTCGTATGCCGTCTTCT	2219	0.42653226767542796	No Hit
GCTGTCTCTTATACACATCTGACGCGCTTCTGTTCGTATGCCGTCTTCTGC	1668	0.3206200191449364	No Hit
GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCGCTTCTGTT	1585	0.30466590548244854	No Hit
GAATGATCTGTCTCTTATACACATCTGACGCGCTTCTGTTCGTATGCCGTC	1220	0.23450624901488154	No Hit
GAATGATACGGCGACTGTCTCTTATACACATCTGACGCGCTTCTGTTCGTA	1018	0.19567816516159786	No Hit
GAATGACTGTCTCTTATACACATCTGACGCGCTTCTGTTCGTATGCCGTCT	690	0.13263058345923628	No Hit
GAATGCTGTCTCTTATACACATCTGACGCGCTTCTGTTCGTATGCCGTCTT	657	0.12628738164162062	No Hit
GAATGATACCTGTCTCTTCTACACATCTGACGCGCTTCTGTTCGTATGCCG	588	0.113024323295697	No Hit
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTA	557	0.10706555795187624	No Hit
GAATCTTTCTCTTATACACATCTGACGCGCTTCTGTTCGTATGCCGTCTTC	530	0.10187566555564527	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CCGCTTA	20	7.029721E-4	45.000004	18
CACCGGT	80	0.0	45.000004	16
CGTTTTT	15090	0.0	44.493042	1
TGATACC	1090	0.0	42.72936	4
TACGGCT	835	0.0	42.035927	7
ACCGGTG	70	0.0	41.785713	17
GATACCT	1115	0.0	41.7713	5
GAATGAT	3120	0.0	41.322117	1
AATCGTT	60	3.6379788E-12	41.250004	22
TAATCGT	60	3.6379788E-12	41.250004	21
GTTTTTT	16570	0.0	40.98069	2
ATGATAC	2995	0.0	40.943237	3
ACGGCTG	855	0.0	40.789474	8
CCGATGA	150	0.0	40.5	18
AATGATA	2980	0.0	40.4698	2
TTGGGAC	750	0.0	40.199997	5
ATACGGC	1920	0.0	40.195316	6
GACACGA	140	0.0	40.17857	25
CGACCAC	600	0.0	40.125	12
ACCACCG	320	0.0	40.07813	14