##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2933232.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 554571 Sequences flagged as poor quality 0 Sequence length 51 %GC 42 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 29.374271283568742 31.0 28.0 31.0 25.0 34.0 2 28.629279208613504 31.0 28.0 33.0 16.0 34.0 3 28.66694435879265 31.0 28.0 34.0 16.0 34.0 4 33.010712785197924 35.0 32.0 37.0 28.0 37.0 5 34.08456446514513 35.0 33.0 37.0 30.0 37.0 6 33.579471339107165 35.0 33.0 37.0 28.0 37.0 7 33.255920342030144 35.0 32.0 36.0 28.0 37.0 8 33.40970227437064 35.0 33.0 37.0 28.0 37.0 9 34.33981041201217 37.0 33.0 39.0 27.0 39.0 10 33.972750107740936 35.0 32.0 39.0 27.0 39.0 11 34.150932883255706 37.0 32.0 39.0 27.0 39.0 12 34.23214160134591 37.0 32.0 39.0 26.0 39.0 13 34.415126286805474 37.0 33.0 39.0 27.0 39.0 14 35.18854393756615 37.0 33.0 40.0 27.0 41.0 15 35.54690021656379 38.0 33.0 40.0 27.0 41.0 16 35.38960565914915 37.0 33.0 40.0 27.0 41.0 17 34.85211992693451 37.0 32.0 40.0 27.0 41.0 18 34.6956025468335 37.0 33.0 39.0 27.0 40.0 19 34.10866056825907 37.0 32.0 38.0 25.0 40.0 20 33.78612296712233 35.0 32.0 38.0 26.0 40.0 21 34.141361520887315 35.0 33.0 38.0 27.0 40.0 22 34.87355631650411 36.0 33.0 39.0 29.0 40.0 23 35.29247292050973 36.0 34.0 39.0 30.0 40.0 24 34.774661855740746 36.0 33.0 39.0 27.0 40.0 25 33.66573802092068 35.0 32.0 39.0 24.0 40.0 26 33.874420047207664 35.0 32.0 38.0 25.0 40.0 27 34.53348985071344 35.0 33.0 39.0 27.0 40.0 28 34.3816715984067 35.0 33.0 39.0 25.0 40.0 29 34.589635952835614 36.0 33.0 39.0 25.0 40.0 30 33.851710601528026 35.0 33.0 39.0 23.0 40.0 31 33.82862609115875 35.0 33.0 39.0 23.0 40.0 32 33.53880927780212 35.0 33.0 39.0 21.0 40.0 33 33.39944930405665 36.0 33.0 39.0 18.0 40.0 34 33.107504719864544 36.0 33.0 40.0 15.0 41.0 35 32.74080866110922 36.0 32.0 40.0 13.0 41.0 36 32.17978221003262 36.0 31.0 40.0 10.0 41.0 37 32.219796924108906 36.0 31.0 40.0 10.0 41.0 38 32.008273061519624 36.0 31.0 40.0 10.0 41.0 39 31.65234568702655 35.0 30.0 39.0 10.0 40.0 40 31.411649725643787 35.0 30.0 39.0 10.0 40.0 41 30.912570257009474 35.0 27.0 39.0 8.0 40.0 42 31.186665007726692 35.0 29.0 39.0 8.0 40.0 43 31.14188625081369 35.0 29.0 39.0 8.0 40.0 44 31.256124103135576 35.0 29.0 39.0 8.0 40.0 45 31.357481729120348 35.0 30.0 39.0 8.0 40.0 46 31.181644911111473 35.0 29.0 39.0 8.0 40.0 47 31.110238364429442 35.0 29.0 39.0 8.0 40.0 48 30.963198580524406 35.0 29.0 39.0 8.0 40.0 49 31.120651819153906 35.0 29.0 39.0 8.0 40.0 50 31.093881576930638 35.0 29.0 39.0 8.0 40.0 51 29.810341687538656 34.0 26.0 38.0 7.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 3.0 8 18.0 9 38.0 10 46.0 11 47.0 12 60.0 13 84.0 14 111.0 15 189.0 16 296.0 17 600.0 18 985.0 19 1808.0 20 2856.0 21 4087.0 22 5907.0 23 8195.0 24 11283.0 25 16333.0 26 20892.0 27 22533.0 28 22122.0 29 22217.0 30 24559.0 31 29379.0 32 34959.0 33 42092.0 34 47697.0 35 56073.0 36 62116.0 37 63408.0 38 47117.0 39 6461.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 27.1258324001796 2.703891837113733 38.027592499427485 32.14268326327918 2 30.40422236287148 15.686720005193203 37.09209461006796 16.816963021867355 3 13.547949676416545 15.968198841987771 53.77489987756302 16.708951604032666 4 12.446016831027947 3.3964992760169572 64.90963285133914 19.247851041615952 5 21.85112456295046 3.9192456872068684 54.26302493278589 19.966604817056787 6 16.031491008365027 13.27945384810962 57.5798229622537 13.109232181271649 7 60.6719428170604 1.5947462092320008 34.46808433906569 3.265226634641912 8 60.112771854280155 9.294030881528244 26.880237156288374 3.7129601079032257 9 56.56065679597383 2.9687812741740913 25.986393085826702 14.484168844025383 10 35.15600346934838 17.464490570188488 33.002627256023125 14.376878704440008 11 27.977301373494107 17.611811652610758 38.5745017319694 15.83638524192574 12 22.04983672063631 15.827910222496309 42.69137765948815 19.430875397379236 13 20.426059061869445 16.71922981908538 48.11575073344982 14.738960385595352 14 17.293547625101205 21.71299977820694 42.99792091544635 17.995531681245502 15 14.855446822859472 16.240120741978934 51.161889099862776 17.742543335298816 16 18.47139500623004 18.77036484057046 40.46190659086032 22.29633356233918 17 18.710318426315116 18.886310319147594 43.596221223251845 18.807150031285445 18 19.213410005211234 17.9738933337661 42.95067719011632 19.86201947090634 19 18.97124083300425 20.486826754374103 39.2510607298254 21.29087168279625 20 20.179021261479594 21.59416918663255 43.63733408346271 14.589475468425142 21 19.101431557005323 23.264108653355475 42.30982146560134 15.32463832403786 22 17.642646297768906 16.258693656898757 44.52432601055591 21.57433403477643 23 18.112018118509624 21.793602622567715 43.78681900063292 16.30756025828974 24 20.015651738010103 19.54916503026664 40.72751730617 19.70766592555327 25 18.086232421096668 25.876398152806402 37.85015805009638 18.187211376000548 26 17.282548131799174 17.666809119120906 41.87885771163656 23.171785037443357 27 19.71920637754228 18.573996837194876 40.352632936089336 21.354163849173506 28 14.566935523134097 20.30127792473822 42.7896518209571 22.342134731170578 29 18.950864722461144 18.408283159415113 39.97324057695047 22.667611541173265 30 17.664464964810637 20.168923365989205 45.208638749592026 16.95797291960813 31 19.706584008179295 17.262712979943053 43.267318341564916 19.76338467031273 32 22.279022884355655 19.44025201462031 40.53782112660056 17.742903974423474 33 19.552951741075532 17.7214459465064 37.17991023692187 25.545692075496195 34 19.757614444318218 19.46784090765655 41.02288074926385 19.751663898761386 35 21.37021229022073 21.797028694251953 37.96934928079543 18.863409734731892 36 22.87245456397828 21.98420039994879 34.66391138375429 20.47943365231864 37 19.05815486204652 22.52461812824688 40.048794473566055 18.368432536140546 38 21.75248976235685 21.960578537283773 33.581813690221814 22.705118010137564 39 22.376395448012968 20.68950594243118 36.79078062141728 20.14331798813858 40 23.843836046241147 20.786157227839176 34.953143961728976 20.4168627641907 41 21.709213067398043 23.656303701419656 34.073004178004254 20.56147905317804 42 21.50094397290879 21.49066575785607 37.82184787881083 19.18654239042431 43 23.84942595267333 19.989685721034817 33.0603295159682 23.100558810323655 44 22.400017310677985 21.04942378883858 33.51563641084731 23.034922489636134 45 20.111581745168788 20.524693862463057 33.20170005283363 26.162024339534522 46 23.707153817996254 22.976138312317087 31.584413898310586 21.732293971376073 47 17.13035842119404 22.21140304848252 39.57257050945686 21.08566802086658 48 20.005734162082042 24.402105411209746 32.1154550093676 23.47670541734061 49 20.232756491053443 21.343705314558463 36.64219730205871 21.781340892329386 50 20.28486884456634 20.709521413849625 34.9049986385873 24.10061110299673 51 19.107021463437505 21.39960437888025 32.81202947864205 26.681344679040198 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 77.0 1 779.5 2 1482.0 3 13828.0 4 26174.0 5 19287.5 6 12401.0 7 11764.0 8 11127.0 9 10764.5 10 10402.0 11 9765.0 12 9128.0 13 8566.5 14 8005.0 15 7410.0 16 6815.0 17 6313.0 18 5811.0 19 5410.0 20 5009.0 21 4766.5 22 4524.0 23 4483.5 24 4443.0 25 4564.0 26 5036.5 27 5388.0 28 6017.0 29 6646.0 30 7450.0 31 8254.0 32 9034.0 33 9814.0 34 10736.0 35 11658.0 36 12359.5 37 13061.0 38 13887.0 39 14713.0 40 15572.5 41 16432.0 42 17457.0 43 18482.0 44 20652.0 45 22822.0 46 51417.5 47 80013.0 48 57934.0 49 35855.0 50 34505.0 51 33155.0 52 30473.5 53 27792.0 54 27778.0 55 27764.0 56 26790.0 57 25816.0 58 24072.0 59 22328.0 60 19937.0 61 17546.0 62 15669.5 63 13793.0 64 11967.0 65 10141.0 66 8708.5 67 7276.0 68 6130.0 69 4984.0 70 4287.5 71 3591.0 72 3127.0 73 2663.0 74 2300.5 75 1615.5 76 1293.0 77 963.0 78 633.0 79 479.0 80 325.0 81 238.0 82 151.0 83 122.0 84 93.0 85 61.0 86 29.0 87 27.0 88 25.0 89 16.5 90 8.0 91 5.5 92 3.0 93 2.0 94 1.0 95 1.5 96 2.0 97 1.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 554571.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 46.85842886509216 #Duplication Level Percentage of deduplicated Percentage of total 1 77.77406575517126 36.44370527737693 2 7.544113180690781 7.070105816552062 3 4.172941657547085 5.866124694550496 4 2.885856732664011 5.409068496895355 5 2.1164460894746977 4.95866692652263 6 1.5611688579658523 4.389235192643404 7 1.069274782771008 3.5073175441998514 8 0.7548995023619709 2.8298723705377506 9 0.5593786789226338 2.3590445431450924 >10 1.4786132530507712 10.29919877151223 >50 0.050804677119688016 1.6285322311663564 >100 0.026965559348880567 2.3348460497247823 >500 0.0011724156238643725 0.355262849918908 >1k 0.002735636455683536 3.1354693383049193 >5k 3.9080520795479085E-4 1.7255885746318917 >10k+ 0.0011724156238643725 7.687961322317319 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GAATCTGTCTCTTATACACATCTGACGCCTTTCTGGTCGTATGCCGTCTTC 16099 2.9029646339242405 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 13865 2.500130731682688 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCCTTTCTGGTCGTATGCCG 12018 2.16708050006221 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCCTTTCTGGTCGTATGC 9423 1.6991512358201204 No Hit GAACTGTCTCTTATACACATCTGACGCCTTTCTGGTCGTATGCCGTCTTCT 4249 0.7661778203331945 No Hit GAATGATCTGTCTCTTATACACATCTGACGCCTTTCTGGTCGTATGCCGTC 2918 0.5261724828741495 No Hit GCTGTCTCTTATACACATCTGACGCCTTTCTGGTCGTATGCCGTCTTCTGC 2213 0.399047191432657 No Hit GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCCTTTCTGGT 2110 0.38047427651283605 No Hit GAATGACTGTCTCTTATACACATCTGACGCCTTTCTGGTCGTATGCCGTCT 2071 0.3734418135820301 No Hit GAATGATACGGCGACTGTCTCTTATACACATCTGACGCCTTTCTGGTCGTA 1966 0.3545082595375525 No Hit GAATGCTGTCTCTTATACACATCTGACGCCTTTCTGGTCGTATGCCGTCTT 1595 0.28760970191373153 No Hit GAATGATACGGCGACCTGTCTCTTATACACATCTGACGCCTTTCTGGTCGT 897 0.16174664740853742 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 1.8031956232835832E-4 0.0 0.0 0.0618496098786269 0.0 2 1.8031956232835832E-4 0.0 0.0 0.5333852653672839 0.0 3 1.8031956232835832E-4 0.0 0.0 0.6565435264375526 0.0 4 1.8031956232835832E-4 0.0 0.0 1.5768945725614936 0.0 5 1.8031956232835832E-4 0.0 0.0 5.000441782927704 0.0 6 1.8031956232835832E-4 0.0 0.0 5.466026892859525 0.0 7 1.8031956232835832E-4 0.0 0.0 6.040525018437675 0.0 8 1.8031956232835832E-4 0.0 0.0 6.79894909759075 0.0 9 1.8031956232835832E-4 0.0 0.0 6.983596329414989 0.0 10 1.8031956232835832E-4 0.0 0.0 9.774943154257976 0.0 11 1.8031956232835832E-4 0.0 0.0 10.027390541517677 0.0 12 1.8031956232835832E-4 0.0 0.0 12.207995008754514 0.0 13 1.8031956232835832E-4 0.0 0.0 12.434115739914276 0.0 14 1.8031956232835832E-4 0.0 0.0 12.592796954763232 0.0 15 1.8031956232835832E-4 0.0 0.0 13.079118814362813 0.0 16 1.8031956232835832E-4 0.0 0.0 13.350139116542337 0.0 17 1.8031956232835832E-4 0.0 0.0 13.486280386100248 0.0 18 1.8031956232835832E-4 0.0 0.0 13.608537049358874 0.0 19 1.8031956232835832E-4 0.0 0.0 14.18123197931374 0.0 20 1.8031956232835832E-4 0.0 0.0 14.335585524666815 0.0 21 1.8031956232835832E-4 0.0 0.0 14.47443158765965 0.0 22 1.8031956232835832E-4 0.0 0.0 14.733009840038516 0.0 23 1.8031956232835832E-4 0.0 0.0 14.87744580946353 0.0 24 1.8031956232835832E-4 0.0 0.0 15.004571100905023 0.0 25 1.8031956232835832E-4 0.0 0.0 15.11366443611368 0.0 26 1.8031956232835832E-4 0.0 0.0 15.276132361771532 0.0 27 1.8031956232835832E-4 0.0 0.0 15.457714161036188 0.0 28 1.8031956232835832E-4 0.0 0.0 15.576725072172906 0.0 29 1.8031956232835832E-4 0.0 0.0 15.725849350218457 0.0 30 1.8031956232835832E-4 0.0 0.0 15.903644438674219 0.0 31 1.8031956232835832E-4 0.0 0.0 16.04609689291362 0.0 32 1.8031956232835832E-4 0.0 0.0 16.220285590122817 0.0 33 1.8031956232835832E-4 0.0 0.0 16.378425846284784 0.0 34 1.8031956232835832E-4 0.0 0.0 16.608152968691115 0.0 35 1.8031956232835832E-4 0.0 0.0 16.8140779088701 0.0 36 1.8031956232835832E-4 0.0 0.0 16.987365008267652 0.0 37 1.8031956232835832E-4 0.0 0.0 17.171831920529563 0.0 38 1.8031956232835832E-4 0.0 0.0 17.428606977285146 0.0 39 1.8031956232835832E-4 0.0 0.0 17.92124002156622 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TCGTTGA 20 7.0301257E-4 45.0 24 TCTTACG 25 3.8881866E-5 44.999996 1 CGTTTTT 9735 0.0 43.936825 1 GAATCTG 2010 0.0 41.97761 1 ACGGCTG 1175 0.0 40.97872 8 CGACCAC 1160 0.0 40.926723 12 TACGAAT 55 6.002665E-11 40.909092 12 CTCGTCC 105 0.0 40.714287 37 CACCGGT 100 0.0 40.499996 16 AATCTGT 2085 0.0 40.467625 2 TACGGCT 1195 0.0 40.29289 7 GATACCT 1325 0.0 40.245285 5 TGATACC 1320 0.0 40.227272 4 GCGACCA 1200 0.0 39.937504 11 TTACGGG 120 0.0 39.375004 3 ATACCTG 1360 0.0 39.375004 6 AGGGTAC 40 3.4539153E-7 39.375 6 TATACGG 40 3.4539153E-7 39.375 27 GAATGAT 4675 0.0 39.272724 1 ATGATAC 4515 0.0 39.269104 3 >>END_MODULE