##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2933230.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1680623 Sequences flagged as poor quality 0 Sequence length 51 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.222173563017996 33.0 31.0 34.0 30.0 34.0 2 32.41344370510222 34.0 31.0 34.0 30.0 34.0 3 32.47874984455169 34.0 31.0 34.0 30.0 34.0 4 35.956767817648576 37.0 35.0 37.0 35.0 37.0 5 35.18792257395025 37.0 35.0 37.0 35.0 37.0 6 34.87455306752317 37.0 35.0 37.0 32.0 37.0 7 35.64669827796002 37.0 35.0 37.0 35.0 37.0 8 35.92638325192503 37.0 35.0 37.0 35.0 37.0 9 37.80331817427228 39.0 38.0 39.0 35.0 39.0 10 37.27837117545101 39.0 37.0 39.0 34.0 39.0 11 37.21087656184641 39.0 37.0 39.0 34.0 39.0 12 37.045824673350296 39.0 37.0 39.0 33.0 39.0 13 37.00913470778396 39.0 37.0 39.0 33.0 39.0 14 38.161424662163974 40.0 37.0 41.0 33.0 41.0 15 38.25520417131028 40.0 37.0 41.0 33.0 41.0 16 38.24275997650871 40.0 37.0 41.0 33.0 41.0 17 38.14793323666283 40.0 37.0 41.0 33.0 41.0 18 38.13484463797056 40.0 37.0 41.0 33.0 41.0 19 38.10042525896647 40.0 37.0 41.0 34.0 41.0 20 38.019210733162645 40.0 37.0 41.0 33.0 41.0 21 37.886189228637235 40.0 36.0 41.0 33.0 41.0 22 37.93642833639668 40.0 36.0 41.0 33.0 41.0 23 37.84343663034482 40.0 36.0 41.0 33.0 41.0 24 37.79009272156813 40.0 36.0 41.0 33.0 41.0 25 37.669955129734625 40.0 36.0 41.0 33.0 41.0 26 37.621515949740065 40.0 36.0 41.0 33.0 41.0 27 37.56936802602368 40.0 36.0 41.0 33.0 41.0 28 37.46484488192771 39.0 35.0 41.0 33.0 41.0 29 37.394107423259115 39.0 35.0 41.0 33.0 41.0 30 37.28269040706928 39.0 35.0 41.0 32.0 41.0 31 37.2155147228141 39.0 35.0 41.0 32.0 41.0 32 37.16717134062785 39.0 35.0 41.0 32.0 41.0 33 37.04156494347632 39.0 35.0 41.0 31.0 41.0 34 36.90595511307414 39.0 35.0 41.0 31.0 41.0 35 36.76586718139642 39.0 35.0 41.0 31.0 41.0 36 36.61348618934764 39.0 35.0 41.0 31.0 41.0 37 36.585016984772906 39.0 35.0 41.0 31.0 41.0 38 36.468595871887985 39.0 35.0 41.0 30.0 41.0 39 36.435671176700545 39.0 35.0 41.0 30.0 41.0 40 36.32468376310452 39.0 35.0 40.0 30.0 41.0 41 36.17607101652185 38.0 35.0 40.0 30.0 41.0 42 36.071858471531094 38.0 35.0 40.0 30.0 41.0 43 35.90740457556513 38.0 35.0 40.0 29.0 41.0 44 35.81248798808537 38.0 35.0 40.0 29.0 41.0 45 35.76276595048384 38.0 35.0 40.0 29.0 41.0 46 35.51298774323569 38.0 34.0 40.0 28.0 41.0 47 35.412693388106675 37.0 34.0 40.0 28.0 41.0 48 35.32342827629992 37.0 34.0 40.0 28.0 41.0 49 35.37297240368601 37.0 34.0 40.0 28.0 41.0 50 35.19294511618608 37.0 34.0 40.0 28.0 41.0 51 34.12564209819811 36.0 33.0 39.0 24.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 14.0 9 24.0 10 33.0 11 37.0 12 21.0 13 26.0 14 31.0 15 62.0 16 108.0 17 201.0 18 391.0 19 698.0 20 1264.0 21 2078.0 22 3165.0 23 4758.0 24 7020.0 25 10161.0 26 13992.0 27 17066.0 28 20107.0 29 23903.0 30 29309.0 31 36910.0 32 48082.0 33 66821.0 34 110915.0 35 136817.0 36 154720.0 37 224966.0 38 352160.0 39 414638.0 40 125.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 24.395060641202697 4.5284992529556005 53.43792153266973 17.63851857317197 2 20.94842210299395 4.377900338148413 51.96584837884522 22.70782918001241 3 21.42211548931557 4.577052676299206 50.936706209542535 23.064125624842692 4 18.378482265207605 5.043486849817002 50.38209045098158 26.195940433993826 5 17.91924780274934 7.77640196522361 49.52639586629482 24.77795436573223 6 22.28489078157326 7.279086386417418 52.12697910239239 18.309043729616935 7 84.80319500566159 2.0626279659388214 8.79614285892791 4.338034169471678 8 86.97661521947516 2.488124939382598 6.865489761832368 3.6697700793098753 9 81.8280482892356 4.744669089974372 8.655897247627815 4.7713853731622144 10 39.25002811457418 27.737749632130466 15.998650500439421 17.013571752855935 11 31.03468178169643 23.81420461340824 23.94141934270803 21.209694262187295 12 24.777835362243643 21.923715193710905 31.009274536883048 22.289174907162405 13 23.63974549913931 22.88234779602564 32.52710453206936 20.950802172765695 14 22.0686019410659 23.71233762717754 32.4519538290265 21.76710660273006 15 20.478239319585654 21.39724376020083 34.19547394031856 23.929042979894955 16 23.609161602572378 21.203446579036463 31.769825832444276 23.41756598594688 17 22.69521481022216 21.567597254113505 30.190352030169766 25.546835905494568 18 25.205295893249115 20.331865028623312 29.383686882780967 25.079152195346605 19 24.783131017485776 23.090663402797652 27.6850905884306 24.44111499128597 20 28.395838924018058 22.96713778164407 26.868607653233354 21.768415641104518 21 27.127321237422073 24.313602753264714 27.029678875036222 21.52939713427699 22 26.568540356760558 21.588422864616277 26.71902026807916 25.124016510544006 23 24.860661790300384 23.911727972305506 26.62149690918189 24.606113328212217 24 24.725830837731007 22.67355617529928 28.563574341181813 24.037038645787902 25 24.90891770492252 24.090114201697823 25.907832988124046 25.09313510525561 26 24.11617596569843 24.28998056078014 26.39872237854653 25.195121094974898 27 23.543947690826556 22.8229055534763 28.017229325077665 25.61591743061948 28 21.331018318802016 24.747072960443838 28.688111491988387 25.23379722876576 29 22.95975956535166 22.698368402669725 28.018835872173593 26.323036159805024 30 24.467176755286584 21.69326493806166 30.195290674946136 23.644267631705624 31 25.898134203804187 23.714360686483523 26.59835073065167 23.789154379060623 32 24.716905576086965 23.078584548706047 27.233888861451973 24.970621013755018 33 24.181211372211376 22.60566468506024 26.952148102221617 26.260975840506763 34 23.23061150537628 22.948930247890218 29.274084669792096 24.54637357694141 35 23.57857770600545 22.959819067095953 28.115942718860804 25.345660508037792 36 23.769340298210842 25.114377227968436 27.273041009197186 23.843241464623535 37 23.306000215396313 23.865495116989354 28.120048339217064 24.708456328397265 38 22.023797127612795 24.9894830666961 28.196746087611558 24.789973718079544 39 23.445472304020594 23.123448863903445 27.485581239814046 25.94549759226192 40 25.339115316165493 22.78494344061696 27.892454167293913 23.98348707592363 41 22.837780989549707 23.256435262399716 27.440895429849526 26.464888318201048 42 23.108216417364275 22.935304348446977 27.97926721221833 25.977212021970423 43 23.25613775367825 22.078955244572995 28.974195878552177 25.690711123196575 44 24.16377736113334 22.278405091445254 28.307002819787662 25.250814727633742 45 24.52001430421933 21.450378817855047 26.915554529481035 27.114052348444595 46 23.863650562916252 22.115429813824992 28.379594947825897 25.64132467543286 47 22.234968818110904 23.78427523602854 30.108180121300254 23.872575824560297 48 22.101863416126044 23.140585366260012 29.65275377047678 25.104797447137162 49 23.365739966667125 22.326065988624457 29.5590980249586 24.74909601974982 50 22.94458662055678 22.14851278365225 28.671748512307637 26.235152083483328 51 22.408594907959728 21.400278349159805 27.713353916970075 28.477772825910392 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 254.0 1 1042.5 2 1831.0 3 5810.5 4 9790.0 5 6640.0 6 3490.0 7 3422.5 8 3355.0 9 3422.5 10 3490.0 11 3672.0 12 3854.0 13 3939.0 14 4024.0 15 3816.0 16 3608.0 17 3639.5 18 3671.0 19 3821.0 20 3971.0 21 3982.5 22 3994.0 23 4494.5 24 4995.0 25 6024.0 26 8748.5 27 10444.0 28 12242.5 29 14041.0 30 16269.5 31 18498.0 32 21895.0 33 25292.0 34 30768.5 35 36245.0 36 39599.0 37 42953.0 38 45971.0 39 48989.0 40 54360.0 41 59731.0 42 67701.0 43 75671.0 44 84303.5 45 92936.0 46 104751.0 47 116566.0 48 133844.0 49 151122.0 50 152449.5 51 153777.0 52 142834.0 53 131891.0 54 121721.0 55 111551.0 56 105918.5 57 100286.0 58 97529.5 59 94773.0 60 89210.5 61 83648.0 62 77543.5 63 71439.0 64 64393.0 65 57347.0 66 49182.5 67 41018.0 68 34823.0 69 28628.0 70 23830.0 71 19032.0 72 16771.5 73 14511.0 74 12585.5 75 8508.0 76 6356.0 77 4721.5 78 3087.0 79 2299.0 80 1511.0 81 1110.5 82 710.0 83 517.0 84 324.0 85 229.0 86 134.0 87 94.0 88 54.0 89 35.0 90 16.0 91 8.5 92 1.0 93 0.5 94 0.0 95 0.5 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1680623.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 31.634946217006654 #Duplication Level Percentage of deduplicated Percentage of total 1 77.47469901397575 24.509079364859012 2 9.183264387966311 5.810241500197336 3 2.9709921371952026 2.8196152941395964 4 1.480299023458679 1.8731671996881114 5 0.8309875281429346 1.3144122879902522 6 0.5794984992542511 1.0999442314046586 7 0.4258281680606501 0.9429735835999595 8 0.36466201891327527 0.9228850684565221 9 0.30241196469724546 0.8610107614719009 >10 6.016178991247557 48.13696976057998 >50 0.3012838533453974 5.882939674484811 >100 0.06430286758556995 3.590421940034174 >500 0.0035413125661897297 0.8039571505676916 >1k 0.001863848719047226 1.114926715077703 >5k 1.8638487190472263E-4 0.31745546744821795 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 5384 0.3203573912769253 No Hit CCTGTCTCTTATACACATCTGACGCGTTCTGCTTCGTATGCCGTCTTCTGC 3126 0.18600245266189977 No Hit CTGTCTCTTATACACATCTGACGCGTTCTGCTTCGTATGCCGTCTTCTGCT 2873 0.1709485113556104 No Hit TCTGTCTCTTATACACATCTGACGCGTTCTGCTTCGTATGCCGTCTTCTGC 2652 0.15779862586671728 No Hit GCTGTCTCTTATACACATCTGACGCGTTCTGCTTCGTATGCCGTCTTCTGC 2465 0.14667179968380772 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 2.3800697717453587E-4 0.0 0.0 0.18558594045184434 0.0 2 2.3800697717453587E-4 0.0 0.0 0.7338350123733878 0.0 3 2.3800697717453587E-4 0.0 0.0 1.1244639636610947 0.0 4 2.3800697717453587E-4 0.0 0.0 1.5853644749595834 0.0 5 2.3800697717453587E-4 0.0 0.0 2.3422266623746073 0.0 6 2.3800697717453587E-4 0.0 0.0 3.018701993248932 0.0 7 2.3800697717453587E-4 0.0 0.0 3.6087807914089 0.0 8 2.3800697717453587E-4 0.0 0.0 4.5053530744253765 0.0 9 2.3800697717453587E-4 0.0 0.0 5.012962454994368 0.0 10 2.3800697717453587E-4 0.0 0.0 5.816236002958426 0.0 11 2.3800697717453587E-4 0.0 0.0 7.139733301281727 0.0 12 2.3800697717453587E-4 0.0 0.0 8.278537185317587 0.0 13 2.3800697717453587E-4 0.0 0.0 8.661371408102829 0.0 14 2.3800697717453587E-4 0.0 0.0 8.794476810087687 0.0 15 2.3800697717453587E-4 0.0 0.0 8.99214160463114 0.0 16 2.3800697717453587E-4 0.0 0.0 9.466430008395696 0.0 17 2.3800697717453587E-4 0.0 0.0 10.166587033498887 0.0 18 2.3800697717453587E-4 0.0 0.0 10.878584905716512 0.0 19 2.3800697717453587E-4 0.0 0.0 11.351326264129433 0.0 20 2.3800697717453587E-4 0.0 0.0 11.851854937127483 0.0 21 2.3800697717453587E-4 0.0 0.0 12.55344000409372 0.0 22 2.9750872146816986E-4 0.0 0.0 13.287096511234227 0.0 23 2.9750872146816986E-4 0.0 0.0 13.98874107994476 0.0 24 2.9750872146816986E-4 0.0 0.0 14.56085035132805 0.0 25 3.570104657618038E-4 0.0 0.0 15.061855038280447 0.0 26 3.570104657618038E-4 0.0 0.0 15.505500043733782 0.0 27 3.570104657618038E-4 0.0 0.0 15.95378618524202 0.0 28 3.570104657618038E-4 0.0 0.0 16.42420697562749 0.0 29 3.570104657618038E-4 0.0 0.0 16.941991154470692 0.0 30 3.570104657618038E-4 0.0 0.0 17.548908946265758 0.0 31 3.570104657618038E-4 0.0 0.0 18.043130434368685 0.0 32 3.570104657618038E-4 0.0 0.0 18.53330580385964 0.0 33 3.570104657618038E-4 0.0 0.0 19.02824131289409 0.0 34 3.570104657618038E-4 0.0 0.0 19.538944784166347 0.0 35 3.570104657618038E-4 0.0 0.0 20.101712281695537 0.0 36 3.570104657618038E-4 0.0 0.0 20.59688579770716 0.0 37 3.570104657618038E-4 0.0 0.0 21.10937432130823 0.0 38 3.570104657618038E-4 0.0 0.0 21.656076347878138 0.0 39 3.570104657618038E-4 0.0 0.0 22.223901493672287 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTTAAT 20 7.034219E-4 45.0 35 CGCGTAG 20 7.034219E-4 45.0 29 TATACGG 20 7.034219E-4 45.0 2 TACGGGA 370 0.0 40.135136 4 CCGTTAG 45 1.9292202E-8 40.0 1 GTTACCG 155 0.0 39.19355 38 CATCGAA 35 6.250015E-6 38.571426 12 ACCGGTA 135 0.0 38.333336 41 CGTTTTT 3125 0.0 38.016 1 TTTGGGC 4510 0.0 37.865856 4 ACACGAC 1585 0.0 37.76025 26 CGACCAA 1555 0.0 37.62058 29 ATTACGG 30 1.1401462E-4 37.500004 2 CACGACC 1590 0.0 37.5 27 TTTGGGA 7535 0.0 37.445255 4 TCAAGCG 1650 0.0 37.363636 17 TGGGCGA 2940 0.0 37.27041 6 ACGACCA 1580 0.0 37.025314 28 CGTTCAT 305 0.0 36.885246 17 GCGAGAC 1680 0.0 36.69643 21 >>END_MODULE