##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2933229.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1892438 Sequences flagged as poor quality 0 Sequence length 51 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.234760663229125 33.0 31.0 34.0 30.0 34.0 2 32.42217922066668 34.0 31.0 34.0 30.0 34.0 3 32.48299865041814 34.0 31.0 34.0 30.0 34.0 4 35.96477189741487 37.0 35.0 37.0 35.0 37.0 5 35.16702845747126 37.0 35.0 37.0 35.0 37.0 6 34.83956673877823 37.0 35.0 37.0 32.0 37.0 7 35.63221674897672 37.0 35.0 37.0 33.0 37.0 8 35.91716241166157 37.0 35.0 37.0 35.0 37.0 9 37.77502301264295 39.0 38.0 39.0 35.0 39.0 10 37.295064884556325 39.0 37.0 39.0 34.0 39.0 11 37.24507381483568 39.0 37.0 39.0 34.0 39.0 12 37.11580987065362 39.0 37.0 39.0 34.0 39.0 13 37.10843472811263 39.0 37.0 39.0 33.0 39.0 14 38.30405487524558 40.0 38.0 41.0 33.0 41.0 15 38.37909934169574 40.0 38.0 41.0 34.0 41.0 16 38.36015710950636 40.0 38.0 41.0 34.0 41.0 17 38.302040542411426 40.0 38.0 41.0 34.0 41.0 18 38.23867043464568 40.0 37.0 41.0 34.0 41.0 19 38.21014638260276 40.0 37.0 41.0 34.0 41.0 20 38.107159124896036 40.0 37.0 41.0 34.0 41.0 21 37.99792014322266 40.0 37.0 41.0 33.0 41.0 22 38.0212794289694 40.0 37.0 41.0 33.0 41.0 23 37.915470414354395 40.0 36.0 41.0 33.0 41.0 24 37.84605783650508 40.0 36.0 41.0 33.0 41.0 25 37.72707692405247 40.0 36.0 41.0 33.0 41.0 26 37.69159518039693 40.0 36.0 41.0 33.0 41.0 27 37.63915224699567 40.0 36.0 41.0 33.0 41.0 28 37.543898928260795 40.0 36.0 41.0 33.0 41.0 29 37.46074111807098 39.0 36.0 41.0 33.0 41.0 30 37.3409406279096 39.0 35.0 41.0 32.0 41.0 31 37.26437695713149 39.0 35.0 41.0 32.0 41.0 32 37.20034156997482 39.0 35.0 41.0 32.0 41.0 33 37.03960975207642 39.0 35.0 41.0 31.0 41.0 34 36.910518072454686 39.0 35.0 41.0 31.0 41.0 35 36.752490174050614 39.0 35.0 41.0 31.0 41.0 36 36.59432752882789 39.0 35.0 41.0 30.0 41.0 37 36.57111567195332 39.0 35.0 41.0 30.0 41.0 38 36.471582160155315 39.0 35.0 41.0 30.0 41.0 39 36.39339624336438 39.0 35.0 41.0 30.0 41.0 40 36.27698873093861 39.0 35.0 41.0 30.0 41.0 41 36.14570516973343 39.0 35.0 40.0 30.0 41.0 42 36.05053269908974 38.0 35.0 40.0 30.0 41.0 43 35.92781216610531 38.0 35.0 40.0 29.0 41.0 44 35.87984282708337 38.0 35.0 40.0 29.0 41.0 45 35.86463968700692 38.0 35.0 40.0 29.0 41.0 46 35.64588430373941 38.0 35.0 40.0 28.0 41.0 47 35.562311684715695 38.0 35.0 40.0 28.0 41.0 48 35.4559108409364 38.0 34.0 40.0 28.0 41.0 49 35.487134056703574 38.0 34.0 40.0 28.0 41.0 50 35.29992158263573 37.0 34.0 40.0 28.0 41.0 51 34.23575092024151 36.0 33.0 40.0 24.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 4.0 8 16.0 9 27.0 10 35.0 11 42.0 12 32.0 13 36.0 14 53.0 15 67.0 16 140.0 17 233.0 18 473.0 19 817.0 20 1526.0 21 2392.0 22 3743.0 23 5559.0 24 8459.0 25 12351.0 26 17409.0 27 20568.0 28 23105.0 29 26702.0 30 32328.0 31 39865.0 32 51629.0 33 71256.0 34 114183.0 35 146887.0 36 170547.0 37 250138.0 38 393355.0 39 498260.0 40 201.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 24.446824678007946 4.4141472534371005 53.67726710201338 17.461760966541572 2 21.87870884013109 4.2719497283398455 52.40314345833258 21.44619797319648 3 20.88464721169201 4.367857758087715 52.010898111325176 22.736596918895096 4 18.673531180413836 4.7685049655523715 51.867062487648205 24.690901366385585 5 17.21514786745986 7.8508252317909495 50.35520318234996 24.578823718399228 6 21.4802809920325 8.020236330067352 53.41961004799101 17.079872629909143 7 83.34407785089921 2.2857287794897374 9.9955718496458 4.374621519965252 8 85.91277494956242 2.713166825016196 7.578848025668476 3.795210199752911 9 80.00267379961721 5.366252421479594 9.596404215091855 5.034669563811338 10 37.884358694974416 27.706640851642167 16.99495571321227 17.414044740171146 11 29.523345018436537 24.560751792132688 25.02967072104872 20.886232468382055 12 25.511218861595463 21.72160990214739 31.53059703937461 21.23657419688254 13 24.01389107595599 20.920051277769733 33.55851023917296 21.507547407101317 14 21.542634421841033 23.15790530522004 32.709922332990566 22.58953793994836 15 19.813647791895956 22.691734154566753 34.974514356613 22.520103696924284 16 22.2399888397929 20.919100123755705 33.19379551668271 23.64711551976868 17 22.25631698370039 21.390079886368802 30.583194799512587 25.77040833041822 18 23.242399486799567 21.181829999186235 31.185116764723595 24.390653749290596 19 24.57993339808226 23.48272440101076 29.13500997126458 22.802332229642396 20 27.167072316239686 23.10786403570421 28.111304042721613 21.613759605334497 21 26.71146954352005 23.18068015966705 27.551866956803867 22.555983340009025 22 24.872783150623693 22.642485513395947 27.434135226623013 25.050596109357347 23 23.663760715014178 23.97864553554727 27.581299889349083 24.77629386008947 24 23.54703298073702 22.772265194421166 29.54876196736696 24.131939857474855 25 23.49567066397948 23.98303141238973 27.605924209934486 24.9153737136963 26 22.75165685745055 24.424842451905953 27.735175472063023 25.088325218580476 27 22.343875994880676 23.782919176216076 28.871223258040686 25.001981570862558 28 21.822749278972413 23.912593173461957 29.23392998872354 25.030727558842088 29 22.717573838614527 23.366208034292274 28.316858993531095 25.599359133562103 30 23.59754982725986 23.74217807928186 28.68194360924902 23.978328484209257 31 23.873278807548783 25.586677080041724 26.103048025879843 24.43699608652965 32 23.886013702958827 25.8353510128205 25.49589471359167 24.782740570629 33 24.18034302841097 25.307936112041716 26.311139387393407 24.20058147215391 34 23.069553665694727 24.356570730454578 27.07829794159703 25.495577662253666 35 23.075841850565247 24.87553092888644 26.363611383833973 25.68501583671433 36 22.91477977085643 27.49014762967136 26.002754119289513 23.592318480182705 37 23.598131088046216 27.355929229914004 25.964707958728372 23.08123172331141 38 22.992721558117097 26.24255061460402 26.81662490395987 23.94810292331902 39 23.558605354574365 25.24711509703356 27.045483128113045 24.148796420279027 40 23.77673667512489 24.565718929761506 28.864353812383815 22.793190582729792 41 21.607418578574304 26.006558735345624 27.864426734191554 24.521595951888518 42 21.718703598215637 26.898899726173326 26.406677523913597 24.97571915169744 43 21.979002746721424 25.106397144847016 27.570625827636096 25.34397428079546 44 22.619393607610924 24.011090455803572 27.74600805944501 25.623507877140494 45 23.31283772572734 23.702493820141004 26.832847364088018 26.151821090043637 46 22.812319346789696 24.57449068344643 27.69480426835648 24.91838570140739 47 21.802457993339807 25.704514494001916 28.04398347528426 24.449044037374012 48 21.596533149302648 24.708392031865774 28.555387283493566 25.139687535338012 49 22.178005303212046 24.271970865095714 28.683158972711393 24.86686485898085 50 21.98735176528901 23.59274121530005 28.801260596119928 25.618646423291015 51 21.240114603490312 23.948789867884706 27.94448219703895 26.866613331586027 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 337.0 1 1486.5 2 2636.0 3 9496.5 4 16357.0 5 11001.0 6 5645.0 7 5495.5 8 5346.0 9 5368.0 10 5390.0 11 5358.0 12 5326.0 13 5198.0 14 5070.0 15 4873.0 16 4676.0 17 4730.0 18 4784.0 19 4824.5 20 4865.0 21 5375.5 22 5886.0 23 6635.0 24 7384.0 25 8389.5 26 11998.5 27 14602.0 28 16938.5 29 19275.0 30 22686.0 31 26097.0 32 28815.5 33 31534.0 34 38659.0 35 45784.0 36 49629.0 37 53474.0 38 58143.5 39 62813.0 40 68329.0 41 73845.0 42 81296.5 43 88748.0 44 99321.5 45 109895.0 46 123848.0 47 137801.0 48 153055.5 49 168310.0 50 166737.0 51 165164.0 52 152788.0 53 140412.0 54 130225.5 55 120039.0 56 114228.0 57 108417.0 58 104955.0 59 101493.0 60 96545.5 61 91598.0 62 82809.5 63 74021.0 64 65710.5 65 57400.0 66 48379.5 67 39359.0 68 33773.5 69 28188.0 70 23536.0 71 18884.0 72 15748.5 73 12613.0 74 10457.5 75 6643.0 76 4984.0 77 3995.0 78 3006.0 79 2527.5 80 2049.0 81 1432.5 82 816.0 83 546.5 84 277.0 85 172.5 86 68.0 87 60.0 88 52.0 89 29.5 90 7.0 91 6.5 92 6.0 93 5.0 94 4.0 95 4.0 96 4.0 97 2.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1892438.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 29.07179968231372 #Duplication Level Percentage of deduplicated Percentage of total 1 74.6399492148055 21.69917651870895 2 9.869946272206745 5.738742018015871 3 3.2945306567737824 2.8733380590290656 4 1.5900244170433995 1.8489948536909346 5 0.933810697078598 1.3573778763335371 6 0.6818704181848035 1.189392012405846 7 0.5409796263126393 1.100907592986179 8 0.4359653606339049 1.0139438106221235 9 0.37917875785216015 0.9921068002859887 >10 7.275529508860728 51.91222842180001 >50 0.29102065501596724 5.198862466627492 >100 0.06291335181680835 3.2692031626947013 >500 0.0027919978793737284 0.5486984047031607 >1k 0.00130293234370774 0.7518358614344887 >5k 1.8613319195824856E-4 0.5051921406616083 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 9336 0.4933318819427638 No Hit CTGTCTCTTATACACATCTGACGCCACGTGAATCGTATGCCGTCTTCTGCT 2859 0.15107496256152117 No Hit GCTGTCTCTTATACACATCTGACGCCACGTGAATCGTATGCCGTCTTCTGC 2802 0.14806297485043105 No Hit TCTGTCTCTTATACACATCTGACGCCACGTGAATCGTATGCCGTCTTCTGC 2581 0.1363849172337482 No Hit CCTGTCTCTTATACACATCTGACGCCACGTGAATCGTATGCCGTCTTCTGC 2013 0.10637072390218333 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 5.2841889668248046E-5 0.0 0.0 0.16423259308891494 0.0 2 5.2841889668248046E-5 0.0 0.0 0.6056208974877909 0.0 3 5.2841889668248046E-5 0.0 0.0 0.9306513608371846 0.0 4 5.2841889668248046E-5 0.0 0.0 1.3227910240652534 0.0 5 5.2841889668248046E-5 0.0 0.0 1.9811481274419558 0.0 6 5.2841889668248046E-5 0.0 0.0 2.6648693378594173 0.0 7 5.2841889668248046E-5 0.0 0.0 3.2008974666541254 0.0 8 5.2841889668248046E-5 0.0 0.0 4.022430325326378 0.0 9 5.2841889668248046E-5 0.0 0.0 4.530346568817579 0.0 10 5.2841889668248046E-5 0.0 0.0 5.319223139674853 0.0 11 5.2841889668248046E-5 0.0 0.0 6.530359250871099 0.0 12 5.2841889668248046E-5 0.0 0.0 7.565848920810088 0.0 13 5.2841889668248046E-5 0.0 0.0 7.910325199557397 0.0 14 5.2841889668248046E-5 0.0 0.0 8.04232423994868 0.0 15 5.2841889668248046E-5 0.0 0.0 8.232924935982052 0.0 16 5.2841889668248046E-5 0.0 0.0 8.671248410780168 0.0 17 5.2841889668248046E-5 0.0 0.0 9.265772511437627 0.0 18 5.2841889668248046E-5 0.0 0.0 9.913297027432339 0.0 19 5.2841889668248046E-5 0.0 0.0 10.339625393275764 0.0 20 5.2841889668248046E-5 0.0 0.0 10.81567797729701 0.0 21 5.2841889668248046E-5 0.0 0.0 11.482172731682622 0.0 22 5.2841889668248046E-5 0.0 0.0 12.19379445984492 0.0 23 5.2841889668248046E-5 0.0 0.0 12.890673300789775 0.0 24 5.2841889668248046E-5 0.0 0.0 13.445354616637374 0.0 25 5.2841889668248046E-5 0.0 0.0 13.931024424578242 0.0 26 5.2841889668248046E-5 0.0 0.0 14.351170289330483 0.0 27 5.2841889668248046E-5 0.0 0.0 14.779136753753624 0.0 28 5.2841889668248046E-5 0.0 0.0 15.221793263504537 0.0 29 5.2841889668248046E-5 0.0 0.0 15.697528796187775 0.0 30 5.2841889668248046E-5 0.0 0.0 16.24269857189509 0.0 31 5.2841889668248046E-5 0.0 0.0 16.729055324401646 0.0 32 5.2841889668248046E-5 0.0 0.0 17.20933525959635 0.0 33 5.2841889668248046E-5 0.0 0.0 17.692362973053807 0.0 34 1.0568377933649609E-4 0.0 0.0 18.172642908248513 0.0 35 1.0568377933649609E-4 0.0 0.0 18.6968872956472 0.0 36 1.0568377933649609E-4 0.0 0.0 19.18287415492608 0.0 37 1.0568377933649609E-4 0.0 0.0 19.663523983348465 0.0 38 1.5852566900474414E-4 0.0 0.0 20.146657380585257 0.0 39 1.5852566900474414E-4 0.0 0.0 20.63967221119001 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGATCGC 20 7.0344453E-4 45.0 10 CGAACGA 60 0.0 44.999996 22 GCGATCG 65 0.0 44.999996 9 CGTTTTT 5175 0.0 40.391304 1 GTCGTTA 35 6.250433E-6 38.571426 22 TTTGGGA 9940 0.0 38.02817 4 ACGGGTA 30 1.14020084E-4 37.499996 5 TACGTCG 30 1.14020084E-4 37.499996 24 TTTGGGC 5565 0.0 37.439354 4 CGTTTGG 1325 0.0 37.35849 2 AGACACG 230 0.0 37.173916 24 TACGAAT 310 0.0 37.01613 12 TTGGGAC 3940 0.0 36.94797 5 TTGGGAT 5095 0.0 36.830227 5 TGGGCGA 3855 0.0 36.536964 6 TTACGGG 410 0.0 36.219513 3 ACACGAC 230 0.0 36.195656 26 GGGCGAT 6045 0.0 36.17866 7 CCGCTAA 25 0.0021074521 36.0 26 ATACGTA 25 0.0021074521 36.0 37 >>END_MODULE