SRR2933224.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2933224.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	2487182
Sequences flagged as poor quality	0
Sequence length	51
%GC	48

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	14256	0.5731788023554368	No Hit
TCTGTCTCTTATACACATCTGACGCCGCTTTCATCGTATGCCGTCTTCTGC	7401	0.2975656787480771	No Hit
CTGTCTCTTATACACATCTGACGCCGCTTTCATCGTATGCCGTCTTCTGCT	7353	0.2956357837906514	No Hit
CCTGTCTCTTATACACATCTGACGCCGCTTTCATCGTATGCCGTCTTCTGC	5202	0.20915236601101164	No Hit
CGTTTTTTTTCTGTCTCTTATACACATCTGACGCCGCTTTCATCGTATGCC	4551	0.18297816565092542	No Hit
GCTGTCTCTTATACACATCTGACGCCGCTTTCATCGTATGCCGTCTTCTGC	4520	0.18173177515758798	No Hit
TCCTGTCTCTTATACACATCTGACGCCGCTTTCATCGTATGCCGTCTTCTG	2850	0.11458751309715172	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CGTTTTT	7445	0.0	39.892544	1
TCCGATA	80	0.0	39.375	14
TTTGGGC	6720	0.0	37.767857	4
TGGGCGA	4590	0.0	37.5	6
ACGGGTA	60	1.5643309E-10	37.499996	5
TTTGGGA	13715	0.0	36.97776	4
CGATTAC	55	2.752131E-9	36.81818	10
TACGCGC	55	2.752131E-9	36.81818	34
TTGGGCG	3885	0.0	36.776062	5
TATGGGA	1270	0.0	35.964565	4
ACACGCG	810	0.0	35.833332	36
TTGGGAT	6370	0.0	35.74568	5
TTGGGAC	5125	0.0	35.560974	5
GGGCGAT	6880	0.0	35.385174	7
GCGATTC	815	0.0	35.337425	9
TCTTTTG	3345	0.0	35.246635	1
TACGGGA	435	0.0	35.172413	4
TTACACG	820	0.0	35.121952	34
CGATAAC	90	0.0	34.999996	16
TTGGGAG	8055	0.0	34.8324	5